GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001191-TA|BGIBMGA001191-PA|IPR000615|Bestrophin
         (549 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    27   0.34 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    27   0.34 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          26   0.78 
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    24   2.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   2.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   2.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   2.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   2.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   7.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   7.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   9.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   9.6  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   9.6  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 27.1 bits (57), Expect = 0.34
 Identities = 11/54 (20%), Positives = 23/54 (42%)

Query: 156 FEVNWIIDRDLQVSYMIVDEMHHEHPELVKDQYWDEVFPSELPYTLATENQREE 209
           ++V WI+          ++E++      + D YW+E  P  L Y    +   ++
Sbjct: 311 YDVPWIVSFTNSEGLYAINEIYDNALLALLDDYWNEYIPPILYYNYTVDRDLQD 364


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 27.1 bits (57), Expect = 0.34
 Identities = 11/54 (20%), Positives = 23/54 (42%)

Query: 156 FEVNWIIDRDLQVSYMIVDEMHHEHPELVKDQYWDEVFPSELPYTLATENQREE 209
           ++V WI+          ++E++      + D YW+E  P  L Y    +   ++
Sbjct: 311 YDVPWIVSFTNSEGLYAINEIYDNALLALLDDYWNEYIPPILYYNYTVDRDLQD 364


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.8 bits (54), Expect = 0.78
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%)

Query: 419 ERDDERDDKSPTARSLTARGSFADIDDER-RP 449
           +++DE D++ PT  S   + S +D +DER RP
Sbjct: 81  KKEDESDEEKPTT-SFKLKDSSSDSEDERPRP 111


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query: 205 NQREEHPEPSTARVAVPVRQR 225
           +Q+  +P PS  RVAVPV  R
Sbjct: 106 DQQNNNPLPSPRRVAVPVLVR 126


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 11/55 (20%), Positives = 24/55 (43%)

Query: 246  QIQMSDDAQSGIHFIVHRGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSML 300
            ++ M  +    +   V+   ++R+K    ++G+ N   +      N  NSV S +
Sbjct: 1460 RLTMRRETMKALEVRVNSVMAERRKSHMQTLGAKNEYGNNNVVARNHRNSVASSI 1514


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 11/55 (20%), Positives = 24/55 (43%)

Query: 246  QIQMSDDAQSGIHFIVHRGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSML 300
            ++ M  +    +   V+   ++R+K    ++G+ N   +      N  NSV S +
Sbjct: 1460 RLTMRRETMKALEVRVNSVMAERRKSHMQTLGAKNEYGNNNVVARNHRNSVASSI 1514


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 11/55 (20%), Positives = 24/55 (43%)

Query: 246  QIQMSDDAQSGIHFIVHRGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSML 300
            ++ M  +    +   V+   ++R+K    ++G+ N   +      N  NSV S +
Sbjct: 1460 RLTMRRETMKALEVRVNSVMAERRKSHMQTLGAKNEYGNNNVVARNHRNSVASSI 1514


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 11/55 (20%), Positives = 24/55 (43%)

Query: 246  QIQMSDDAQSGIHFIVHRGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSML 300
            ++ M  +    +   V+   ++R+K    ++G+ N   +      N  NSV S +
Sbjct: 1460 RLTMRRETMKALEVRVNSVMAERRKSHMQTLGAKNEYGNNNVVARNHRNSVASSI 1514


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 171 MIVDEMHHEHPELVKDQYWDEV 192
           +IV+EM  E PE  KD+   +V
Sbjct: 433 LIVNEMRSEKPESKKDKKGSQV 454


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 171 MIVDEMHHEHPELVKDQYWDEV 192
           +IV+EM  E PE  KD+   +V
Sbjct: 325 LIVNEMRSEKPESKKDKKGSQV 346


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 381 AQKPLPPSD------PVNVPSRNSNHSSKEDSRLSRSAPNQWGGERD 421
           A  P PP +      P +VP+ +S  S  ED    R  PN     R+
Sbjct: 42  AASPAPPEEEAASPTPGDVPTPSSPRSISEDPLNCRDLPNSRCNSRE 88


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 196  ELPYTLATENQREEHPEPSTARVAVPVRQRS 226
            E P   A E +REE P    +   VP  Q S
Sbjct: 1781 EPPSVEAVEEEREEAPPSVHSSTVVPPPQHS 1811


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 380 FAQKPLPPSDPVNVPSRNSNH 400
           FAQ+P+ PS  VNV    + H
Sbjct: 138 FAQQPMFPSMSVNVSMNMTMH 158


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 404 EDSRLSRSAPNQWGGERDDERDDKSPTARSLTAR 437
           E+  L      Q    + D++DD SP  R+L  R
Sbjct: 99  ENKTLINETSLQLDENKLDKKDDDSPALRALLTR 132


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.128    0.357 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,061
Number of Sequences: 317
Number of extensions: 4987
Number of successful extensions: 24
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 14
length of query: 549
length of database: 114,650
effective HSP length: 60
effective length of query: 489
effective length of database: 95,630
effective search space: 46763070
effective search space used: 46763070
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)