Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001191-TA|BGIBMGA001191-PA|IPR000615|Bestrophin
(549 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 37 0.008
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 36 0.015
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.24
SPBC31F10.07 |||cortical component Lsb5 |Schizosaccharomyces pom... 31 0.55
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 31 0.55
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 31 0.55
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 30 0.72
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 30 0.96
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 30 0.96
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 30 0.96
SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.3
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 29 1.3
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 29 1.3
SPAC23G3.09 |taf4||transcription factor TFIID complex subunit Ta... 29 1.7
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 29 1.7
SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyc... 29 1.7
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.7
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 29 2.2
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 2.2
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 2.9
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 2.9
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 28 2.9
SPAC6F6.03c |||ribosome export GTPase|Schizosaccharomyces pombe|... 28 2.9
SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces ... 28 3.9
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 5.1
SPCC16C4.12 |||NatB N-acetyltransferase complex catalytic subuni... 27 5.1
SPAC8F11.06 |||nuclear envelope protein |Schizosaccharomyces pom... 27 5.1
SPBC28F2.09 |||transcription factor TFIIA complex large subunit ... 27 6.7
SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr 1|||... 27 6.7
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 27 6.7
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 27 6.7
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 27 8.9
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 27 8.9
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 27 8.9
SPBC16A3.08c |||nuclear telomere cap complex subunit |Schizosacc... 27 8.9
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 27 8.9
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 36.7 bits (81), Expect = 0.008
Identities = 46/271 (16%), Positives = 103/271 (38%), Gaps = 14/271 (5%)
Query: 172 IVDEMHHEHPELVKDQYWDEVFPSELP---YTLATENQREEHPEPSTARVAVPVRQRSMV 228
++++ H E+ D+ D+ PS YT + + + + EP+ + +P R + V
Sbjct: 539 VLEDKHENSVEI--DKKADDSLPSNNKTEGYTPSVVREEKNYSEPNASPSVIPPRVPTPV 596
Query: 229 ---LTAPSSVKIDEMVPSNTQIQMSDDAQSGIHFIVHRGSSKR--KKEERNSMGSSNSMA 283
+P +I +PS+ + + + I H + + K +N++ S +
Sbjct: 597 PGRTLSPKPTRIPTPIPSSLNVSLESSKKPEIFHERHIPTPETGPNKPSKNNILKSTQVP 656
Query: 284 SLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDSGNRFTISASNPTLNKPATA 343
+ + N ++ S E ++ + DS + K
Sbjct: 657 VTPKQKSSTANKGSTSSPSPPSSESKKTKRSWGRLFVSGDSDKEHKEHKKDKQKKKNDQI 716
Query: 344 GGSMKIANEVIEEVDEQATITSM---GKRPDNRPTAMSLFAQKPLPP-SDPVNVPSRNSN 399
S K A+ ++ D+++ S+ K+ P S PP + P++ PS N
Sbjct: 717 SSSSKSASSFKKDRDKESIFGSLFGSKKKQTEIPPVSSSPPHNDAPPKAKPISAPSELPN 776
Query: 400 HSSKEDSRLSRSAPNQWGGERDDERDDKSPT 430
+S +++ ++ ++ DE+ + T
Sbjct: 777 TTSVAEAKCQTVTDDEGTDQQSDEKSTEPKT 807
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 35.9 bits (79), Expect = 0.015
Identities = 47/271 (17%), Positives = 99/271 (36%), Gaps = 7/271 (2%)
Query: 269 KKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDSGNRF 328
KK S+S AS + + ++S +S + S E+ +++S + +++ S +
Sbjct: 88 KKGAPPEKAHSSSEASGSGSSSDESDSSSSESES--SSEDNDSSSSSSDSESESSSEDSD 145
Query: 329 TISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPTAMSLFAQKPLPPS 388
+ S+S+ + ++ ++ G ++ E S D+ + S + S
Sbjct: 146 SSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSS 205
Query: 389 DPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPTARSLTARGSFADIDDERR 448
D + S + SS S + ++ D +S ++ + S + +
Sbjct: 206 DSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESES 265
Query: 449 PRLDSDVGASLSAAGSQTLIDDVDGEEEPDIDDFNRLRSIREQHRRDKYLQKLMARSVSA 508
DSD ++ S + + D D E E +D + S D S
Sbjct: 266 SSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSS-----SSDSDSSSSSEDGNSN 320
Query: 509 QQRTGSGEIXXXXXXXXXXXIQSGALKKEEN 539
T SGE+ +S ++K E++
Sbjct: 321 TDTTTSGEVSAQSSTNSTSSEESTSVKDEDS 351
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.9 bits (69), Expect = 0.24
Identities = 50/257 (19%), Positives = 95/257 (36%), Gaps = 3/257 (1%)
Query: 214 STARVAVPVRQRSMVLTAPSSVKIDEMVPSNTQIQMSDDAQSGIHFIVHRGSSKRKKEER 273
ST A P S L++ SSV PS++ + I SS
Sbjct: 195 STFSSAAPTSTSSSYLSS-SSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSS 253
Query: 274 NSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDSGNRFTISAS 333
S SS+S AS + + +S +S S +++S ++ + S + S+S
Sbjct: 254 LSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSS 313
Query: 334 NPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPTAMSLFAQKPLPPSDPVNV 393
+ + + ++ ++ +TI+S P + + + + K
Sbjct: 314 SSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVS 373
Query: 394 PSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDK-SPTARSLTARGSFADIDDERRPRLD 452
S +++ S+ S S S P K S +++S +A S A + R
Sbjct: 374 SSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHNSTSSRSS 433
Query: 453 SDVGA-SLSAAGSQTLI 468
S + SLS+ S+ ++
Sbjct: 434 SHSSSHSLSSLSSKPIL 450
>SPBC31F10.07 |||cortical component Lsb5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 304
Score = 30.7 bits (66), Expect = 0.55
Identities = 41/202 (20%), Positives = 76/202 (37%), Gaps = 10/202 (4%)
Query: 238 DEMVPSNTQIQMSDDAQS-GIHFIVHRGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSV 296
D M+ T + S + IH I + SM S S +Q+ + +
Sbjct: 95 DRMLQCATNSEYSKPVRKRAIHMIKLWHNDYSNVRGMESMSSLVSRLPQRQSSASHSEQP 154
Query: 297 TSMLKRLFSKEEQRQPTTASVTATQTDSGNRFTISASNPTLNKP-----ATAGGSMKIAN 351
T LK++ E+ +++ ++S R + NP NK + +
Sbjct: 155 TINLKKVGPILERLIASSSMAATNLSNSLVRINPNTENPAKNKQIMVYYVDCKRAHRSLL 214
Query: 352 EVIEEVDEQATITSMGKRPDNRPTAMSLFAQKPLP----PSDPVNVPSRNSNHSSKEDSR 407
I+ + ++ + ++ K D TA+ F +K SD + S S H S
Sbjct: 215 RYIQAIQDEMWLANLLKANDEIVTAIDAFKEKCSENSDYSSDSGSYSSSYSRHLDDRASY 274
Query: 408 LSRSAPNQWGGERDDERDDKSP 429
+SRS+ +R ++ D +P
Sbjct: 275 ISRSSSGGSNAQRSEDLDVNNP 296
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 30.7 bits (66), Expect = 0.55
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Query: 224 QRSMVLTAPSSVKIDEMVPSNTQIQMSD-DAQSGIHFIVHRG--SSKRKKEERNSMGSSN 280
Q+ + P V +++ + M+D D SG+ F R +S ++ E R ++GS N
Sbjct: 378 QKRAKILKPEDVA-EQLQNAEEVTDMTDSDTASGLIFDDTRAFVNSIKETENREALGSIN 436
Query: 281 SMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDSGNRFTISASNPTLNKP 340
A +N TNS+T + T+ ++AT ++ + + P ++
Sbjct: 437 EQAFEDSKDLNDTNSITGS-SPTEESNALVEDTSVDISATLEEANTQQENAEDEPLVSDN 495
Query: 341 ATAGGSMKIANEVIEEVDE 359
A S+ VI+ DE
Sbjct: 496 VGAVLSLLRNKGVIKVSDE 514
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 30.7 bits (66), Expect = 0.55
Identities = 52/242 (21%), Positives = 93/242 (38%), Gaps = 20/242 (8%)
Query: 266 SKRKKE----ERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQ 321
S+R+KE E S + SL + T SV + +++Q AS AT
Sbjct: 304 SRREKEGQIKEFMQFSQSLKIGSLDSKQPSSTKSVAEV-----KVADEKQLPDASSQATP 358
Query: 322 TDSGNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGK-RPDNRPTAMSLF 380
DS A KP T+ + ++++E +E+VD + S + +P P S+
Sbjct: 359 ADSKEPRKEEAE-----KPVTS--ATEVSSEKVEKVDGNTSSPSKEEEKPSTEPEKPSVV 411
Query: 381 AQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPTARSLTARGSF 440
Q+ + S K + P ++ + S + S
Sbjct: 412 TQRKETTGTKLGTKLNAKAISFKPNVAAPVFTPGKFTIPSKPAPVNASRPMMPQQSNNSE 471
Query: 441 ADIDDERRPRLDSDVGASLSAAGSQTLIDD--VDGEEEPDIDDFNRLRSIREQHRRDKYL 498
A I P+ S V + S + + V E+EP +D+FN +++ E+H+ + +
Sbjct: 472 ASIPSTT-PQSPSVVSNGENKPSSSPVFFNGPVSSEKEPILDNFNVFKNVGEEHQGAEQI 530
Query: 499 QK 500
K
Sbjct: 531 DK 532
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 30.3 bits (65), Expect = 0.72
Identities = 42/230 (18%), Positives = 85/230 (36%), Gaps = 15/230 (6%)
Query: 195 SELPYTLATENQREEHPEPSTARVAVPVRQRSMVLTAPSSVKIDEMVPSNT-QIQMSDDA 253
S L + AT + S++ + + S+ A SS+ + S+T ++ +
Sbjct: 107 SSLTSSSATSSSLASSSTTSSSLASSSITSSSL---ASSSITSSSLASSSTTSSSLASSS 163
Query: 254 QSGIHFIVHRGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPT 313
+ S+ + +S + +SL + +N T S T+ L S T
Sbjct: 164 TNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSAT 223
Query: 314 TASV---------TATQTDSGNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATIT 364
++S+ +AT T S T+S+S P + +T + A + + + +
Sbjct: 224 SSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLP 283
Query: 365 SMGKRPDNRPTAMSLFAQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAPN 414
S P + P + + S P+ + + S+ S S+ N
Sbjct: 284 S--STPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSAN 331
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 29.9 bits (64), Expect = 0.96
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Query: 200 TLATENQREEHPEPSTARVAVPVRQRSMVLTA--PSSVKIDEMVPSNTQIQMSDDAQSG- 256
+L ENQ + P TA S++ P + D + S + S+ + S
Sbjct: 81 SLFKENQ--DFPSNPTAHSPSSSSNDSVITATGVPDGILRDSPIVSALEPPSSNSSSSPQ 138
Query: 257 IHFIVHRGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTAS 316
+ + H+ SS + SSN + S QQ P +R+ +S + K + +++
Sbjct: 139 LQNLKHQLSSPQPSRAPIDRSSSNPVTSSQQPPNDRSTLSSSQKAKRPLKRSYSEKNSSN 198
Query: 317 VTATQTDSGNRFT-ISASNPTLN 338
+ + SG+R T +S S L+
Sbjct: 199 AEPSGSRSGDRGTNVSTSGSLLD 221
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 29.9 bits (64), Expect = 0.96
Identities = 36/181 (19%), Positives = 71/181 (39%), Gaps = 10/181 (5%)
Query: 263 RGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQT 322
+ SS R + RNS +S + R + +++ L L + P+ +
Sbjct: 159 KNSSSRDQPVRNSGATSTASLPPAGLRAGRGSQISASLAWLKTGGASAAPSNPRQPPPTS 218
Query: 323 DSGNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPTA---MSL 379
+ NR ASN + + A EV +E+ ++ +S+ + R + S
Sbjct: 219 NFSNRKARYASNGLVQLQTGPKRDKRSAGEVQDEIMKRRQNSSISQAATPRTVSNSETSY 278
Query: 380 FAQKPLPPSDPVNVPSRNSNHSSKEDSRLSR-------SAPNQWGGERDDERDDKSPTAR 432
L S P ++ S N++ + S +++ S +++ DDE +D+ P
Sbjct: 279 VGSPALKQSKPNSLKSNNTSRKTSASSAITKPKARPHTSRHDEFVVSDDDELNDRVPDVS 338
Query: 433 S 433
S
Sbjct: 339 S 339
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.9 bits (64), Expect = 0.96
Identities = 24/92 (26%), Positives = 40/92 (43%)
Query: 274 NSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDSGNRFTISAS 333
+S SS+S SL +NS+TS+ S TT SVT+T + + S
Sbjct: 822 SSTTSSSSTTSLAANKGVNSNSITSLNLESTSSVTSTAYTTDSVTSTTALTSQGPSSSVV 881
Query: 334 NPTLNKPATAGGSMKIANEVIEEVDEQATITS 365
+ +L+ + S+ + + V V + TS
Sbjct: 882 SSSLSSTTSLSTSIPVTSSVAPAVTSTGSETS 913
>SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 455
Score = 29.5 bits (63), Expect = 1.3
Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 419 ERDDERDDKSPTARSLTARGSFADIDDERRPRLDSDVGASLSAAGSQTLIDDVDGEEEPD 478
E ++ DD SL G AD + DS +GA + L++ +D E
Sbjct: 3 ETKEQTDDVETLMASLDQLGMEADPTSKEFNNDDSKIGAPSEVQDEKELLEFLDQLEND- 61
Query: 479 IDDFNRLRSIREQHRRDKYLQKLMARSVSAQQRTGSGEIXXXXXXXXXXXIQSGALKKEE 538
++ N I E + + + + A S QQ S + +S A K
Sbjct: 62 -EEKNEKNPIEEANEEN---ESVAATSNERQQHDASNQPSQAAQTTINKNTES-ATPKTV 116
Query: 539 NHINGSKE 546
N IN S+E
Sbjct: 117 NEINKSQE 124
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 29.5 bits (63), Expect = 1.3
Identities = 36/193 (18%), Positives = 70/193 (36%), Gaps = 7/193 (3%)
Query: 192 VFPSELPYTLATENQREEHPEP-STARVAVPVRQRSMVLTAPSSVKIDEMVPSNTQIQMS 250
VFP T + + R + VA P+ QRS +++P+S ++PS+T I +
Sbjct: 385 VFPGATDVTRSVSDHRILSSSTINDGEVAPPLPQRSRTISSPNSPLSATVLPSSTPILLP 444
Query: 251 DDAQSGI-----HFIVHRGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFS 305
S + F GS+ + L+ TS + L
Sbjct: 445 RGRSSTLSVNKKQFNADDGSTLNSPNSIRETEEYAASPKLEDIADEVETDATSQ-RELLE 503
Query: 306 KEEQRQPTTASVTATQTDSGNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITS 365
++ Q+ ++ + ++ G S+ ++ +NE+ E+ I S
Sbjct: 504 RQIQKAESSEDTSEIESLQGKLSLPQVSSTQQEIQPSSSVPEAASNEIAEKEPAVTAIES 563
Query: 366 MGKRPDNRPTAMS 378
+ +R + P S
Sbjct: 564 ITERKEEAPVISS 576
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 29.5 bits (63), Expect = 1.3
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 11/123 (8%)
Query: 315 ASVTATQTDSGNRFTISASN-PTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNR 373
AS +A +D+G T++++ PT K S + +I + N
Sbjct: 205 ASASALSSDTGRSATMNSTTFPTAMK------SQSTTKPTLSNSVSSPSIQVSNNQNANN 258
Query: 374 PTAMSLFAQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPTARS 433
T +S A P+PP VP +++HSS + SR P+ + + D + R
Sbjct: 259 STPLSFHA--PIPPLHVPAVPLTSASHSSSDGK--SRKHPSPYKPYLNSSHDTLGSSTRP 314
Query: 434 LTA 436
+A
Sbjct: 315 SSA 317
>SPAC23G3.09 |taf4||transcription factor TFIID complex subunit
Taf4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 365
Score = 29.1 bits (62), Expect = 1.7
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 264 GSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTD 323
GSS+R+KE+ +S + N Q N T S+ + L S ++ +T
Sbjct: 237 GSSRRRKEQSSSAAAKNISEDAQNRMTNATASIMAG-SALPSGGKKYSWMATDMTPMTPA 295
Query: 324 SGNRFTISASNPTLNKPATAGGSMKIANE 352
G F I + KP++ G + + E
Sbjct: 296 VGGGFGIRKKDSNSLKPSSRDGVLPLQQE 324
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 29.1 bits (62), Expect = 1.7
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 233 SSVKIDEMVPSNTQIQMSDDAQS---GIHFIVHRGSSKRKKEERNSMGSSNSMASLQQTP 289
S+V+ DE +N+ ++S + QS V+ S+ +K+E ++ M + TP
Sbjct: 498 SNVRNDES-KANSLSEISYNQQSECRSSELNVNEDSANQKEESALGTSDNSDMYEKENTP 556
Query: 290 MNRTNSVTSMLKRLFS---KEEQRQPTTASVTATQTDSGNRFTISASNPTLNK--PATAG 344
++ S+ + K L S EE +Q + + T + +P +K P T+G
Sbjct: 557 IHHNESLNQLSKDLGSISLSEETKQEKPSKLKETVESKRLSTGVQKQSPAASKEIPVTSG 616
>SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 920
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 277 GSSNSMASLQQTPMNRTN-SVTSMLKRLFSKEEQRQPTTASVTATQTDSGN 326
G +S S Q +P NR S TS+ KR+ S+EE R P+ T + +
Sbjct: 90 GHLDSSFSSQHSPDNRKRMSSTSVFKRINSEEEGRIPSLTYSAGTMNSTSS 140
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.1 bits (62), Expect = 1.7
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 1/141 (0%)
Query: 329 TISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPTAMSLFAQKPLPPS 388
T + S +L+ T + + + ITS P + ++ S S
Sbjct: 113 TCTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKS 172
Query: 389 DPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPTARSLTARGSFADIDDERR 448
+ S +S+ SSK S S S+ + + SP++ +++ S +
Sbjct: 173 SSSSKSSSSSSSSSKSSSSSSSSSKSS-SSSSSSSKSSASPSSSKSSSKFSSSSFITSTT 231
Query: 449 PRLDSDVGASLSAAGSQTLID 469
P S GA +S A + + D
Sbjct: 232 PASSSSSGAIVSNAKTASTDD 252
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 28.7 bits (61), Expect = 2.2
Identities = 46/205 (22%), Positives = 78/205 (38%), Gaps = 12/205 (5%)
Query: 214 STARVAVPVRQRSMVLTAPSSVKIDEMVPSNTQIQMSDDAQSGIHFIVHRGSSKRKKEER 273
ST+ A P + T SS+ SN S+ AQS + R + RK
Sbjct: 234 STSTPAPPNSNNANPSTLFSSIPSSRHTTSNHF--PSNSAQSSLFSPTARPLTARKL--- 288
Query: 274 NSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDSGNRFTISAS 333
SS + +++ ++ S + + F + P T ++ + S++
Sbjct: 289 -GFASSQTKSAVSNNHSRNSSKDASFMMKSFIPSNRSHPQTQQNESSLFSDNSMVNSSSN 347
Query: 334 NPTLNKPATAGG--SMKIANEVIEEVDEQATI-TSMGK-RPDNRPTAMSLFAQKPLPPSD 389
+ +L AT S ++ +++ + + S G +RP F PLPPS
Sbjct: 348 SFSLFPNATLPNPPSSELLTTPFQQIKPPSQVFMSTGLLSKQHRPRKNINFT--PLPPST 405
Query: 390 PVNVPSRNSNHSSKEDSRLSRSAPN 414
P + HSS DS S S P+
Sbjct: 406 PSKPSTFVRPHSSSTDSPPSPSTPS 430
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 359 EQATITSMGKRPDNRPTAMSLFAQKPLPPSDPVNVPSRNSNHSSKEDSRL 408
+ I+S+ K+ N + M KPL PS N+PS SK ++
Sbjct: 1380 QSGLISSLQKKLYNPESNMEFTGLKPLSPSKISNLPSSQPGSPSKRSGKM 1429
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 247 IQMSDDAQSGIHFIVHRGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSM----LKR 302
++ S DA S + GSS + + S+ASL ++ + + + S+ ++R
Sbjct: 227 LEQSKDASSNLTACNRSGSSLSSNFYSSRLSKKTSLASLNKSRASLQHKIMSLSRNIIRR 286
Query: 303 LFSKEEQRQPTTASVTATQTDSG 325
+F K E +AS+ + G
Sbjct: 287 VFHKPEVHLDPSASILNLSSSHG 309
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.3 bits (60), Expect = 2.9
Identities = 39/229 (17%), Positives = 86/229 (37%), Gaps = 9/229 (3%)
Query: 204 ENQREEHPEPSTARVAVPVRQRSMVLTAPSSVKIDEMVPSNTQIQMSDDAQSGIHFIVHR 263
E +R PEPS V + + ++ S S + S+ + S
Sbjct: 57 EAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSE 116
Query: 264 GSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTD 323
SS +EE +S + + + + + ++ K+E +++ ++++++
Sbjct: 117 SSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESE 176
Query: 324 SGNRFTISASNPTL--NKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPTAMSLFA 381
S + + S + GS + +++ D + D+ + S
Sbjct: 177 SESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDE 236
Query: 382 QK----PLPPSDPVNV--PSRNSNHS-SKEDSRLSRSAPNQWGGERDDE 423
+K P P + PS++SN + + RLS + +QW G+ +E
Sbjct: 237 KKRKAEPASEERPAKITKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEE 285
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 28.3 bits (60), Expect = 2.9
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 12/86 (13%)
Query: 466 TLIDDVDGEEEPDID----DFNRLRSIREQHRRDKYLQKLMARSVSAQQRTGSGEIXXXX 521
+L+D ++G+EE D DF L E++ D +++ SV+A+ + E+
Sbjct: 599 SLLDSIEGQEEVSQDDEEGDFEDLED--EENSSDNEMEESSGSSVTAENEESADEVDFQT 656
Query: 522 XXXXXXXIQSGALKKEENHINGSKED 547
+ A KKEE + +ED
Sbjct: 657 ER------EENARKKEELRLRFEEED 676
>SPAC6F6.03c |||ribosome export GTPase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 537
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 388 SDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPTARSLTARGSFADIDDE 446
+D +N + + ++ + A +W G DD + D+S + + + A GS ++ DE
Sbjct: 470 NDEINSSQKVATQQTEGSDQDGEEAEEEWHGISDDGKADESESTKPV-AEGSASESTDE 527
>SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 311
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 310 RQPTTASVTATQTDSGNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKR 369
R+PT A A+ + S + + AS+P + A ++ V + V I+ +
Sbjct: 159 REPTKAISVASMSTSPSNYASRASSPDMKSSAAVTANVSPIQNVAQHVSTLPKISPI--P 216
Query: 370 PDNRPTAMSL-FAQK 383
P N P S+ ++QK
Sbjct: 217 PSNPPPVPSVSYSQK 231
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 27.5 bits (58), Expect = 5.1
Identities = 49/236 (20%), Positives = 88/236 (37%), Gaps = 27/236 (11%)
Query: 194 PSELPYTLATENQREEHPEPSTARVAVPVRQRSMVLTAPSSVKIDEMVPSNTQIQMSDDA 253
P E P L TENQ E+ + + + + +++S + S I+ + S +M D
Sbjct: 486 PKETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDT 545
Query: 254 -----QSGIHFIVHRGSSKR------KKEERN--------SMGSSNSMASLQQTPMNRTN 294
++ I VH G K+ K E+ + S + AS + N+ +
Sbjct: 546 IPSRFKTSISTEVHDGRLKKYPYYHVKTPEKGTTVVSRTVTSPKSGAYASPSKASYNQDS 605
Query: 295 SVTSMLKRLFSKEEQRQPTTASVTATQTDSGNRFTISASNPTLNKPATAGGSMKIANEVI 354
S + L++ F QR P + + T ++ + F N + + +TA + +
Sbjct: 606 SPNASLEQCF---VQRSP--SKMLTTLRNNSSTFPSLRKNAMIARKSTADSLSSPKRQSV 660
Query: 355 EEVDEQATITSMGKRPDNRPT-AMSLFAQKPLPPSDPVNVPSRNSNHSSKEDSRLS 409
+ + + K P+ A L+A K P VP E R S
Sbjct: 661 PSTPKASLSPRVHKSMTYSPSEASPLYANK--SPKSSTMVPLMKYKSGLNEGMRTS 714
>SPCC16C4.12 |||NatB N-acetyltransferase complex catalytic subunit
Nat3 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 180
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 120 IDLYFPIFSTLEFFFYMG-----WLKVAESLINPFGEDDDDFEVNWIIDRDL 166
+DL+ + L FY G + +V NP G+D+D F++ + RD+
Sbjct: 108 VDLFVRASNALAIDFYKGLGYSVYRRVIGYYSNPHGKDEDSFDMRKPLSRDV 159
>SPAC8F11.06 |||nuclear envelope protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 27.5 bits (58), Expect = 5.1
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 221 PVRQRSMVLTAPSSVKIDEMVPSNTQIQMSDDAQSGIHFIVHRGSSKRKKEERNSMGSSN 280
P+R + +L + + +E P I MS D ++ V R K +K + NS SSN
Sbjct: 22 PIRPKYEILKSKKKTQ-NENDPEPMDISMSPDEKNLKKSTVRR---KLRKSKPNS--SSN 75
Query: 281 SMASLQQTPMNRTNSVTSMLK 301
++S + R+NS +++K
Sbjct: 76 QVSSRTRALTKRSNSSNAIIK 96
>SPBC28F2.09 |||transcription factor TFIIA complex large subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 369
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 432 RSLTARGSFADIDDERRPRLDSDVGASLSAAGSQTLIDDVDGEEEPDIDD 481
R L G+ D +DE++P +D+ ++++ +DD D +E P+ ++
Sbjct: 274 RILQIDGTIEDNEDEKKPPVDTPSDEAINSD-----LDDPDSDEAPETEE 318
>SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 450 RLDSDVGASLSAAGSQTLIDDVDGEEEPDIDDFNRLRSIREQHRRDKYLQKLMARSVSA 508
R+DS + SL + + + + + GE+ DID N L+ ++ + +L + + A
Sbjct: 64 RMDSSLMTSLPHSRNPPIFEAIQGEQPSDIDTLN-LKKVKSGPTSPSSIDRLSSPNAKA 121
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 27.1 bits (57), Expect = 6.7
Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 2/109 (1%)
Query: 322 TDSGNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPTAMSLFA 381
T+S F S S + + S AN V E+ ++ + S + A +
Sbjct: 66 TESSTHFQSSHSVSNAHNQSPLNQSQSSANPVTFEIADEPS-PSFNHSFFEKDNARDI-P 123
Query: 382 QKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPT 430
Q+P +P + S +S+ SS+ + L P+ DD + P+
Sbjct: 124 QQPSHSQNPSSSSSSSSSQSSQHSTHLQFQIPSNEKKSLDDPSPRRKPS 172
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 27.1 bits (57), Expect = 6.7
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 339 KPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRP 374
+P S+K+ ++EE+ E + GKR N P
Sbjct: 2 RPIKKSRSLKLPKSILEEIGESDSSARRGKRNHNLP 37
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 26.6 bits (56), Expect = 8.9
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 427 KSPTARSLTARGSF-ADIDDERRPRLDSDVGASLSAAGSQTLIDDVDGEEEPDIDDF-NR 484
+S S T + +F D +D R P+LDS A ++ SQT +E ++ + +
Sbjct: 120 ESDQQESHTGQANFPTDQEDPRNPQLDSQYEAFITQGESQTDKKKTSTVQEEELQNAGKK 179
Query: 485 LRSIRE 490
L +++E
Sbjct: 180 LETVQE 185
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 26.6 bits (56), Expect = 8.9
Identities = 30/153 (19%), Positives = 54/153 (35%)
Query: 261 VHRGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTAT 320
+ R S R+K+ ++S + A L+ + T K S + + +A +T
Sbjct: 600 IFRRFSSRRKQNKSSTSTLQISAPLETSQSPPTPRTKPSHKPPVSYKNKLVTQSAIGRST 659
Query: 321 QTDSGNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPTAMSLF 380
G IS+ +LN +T + +AN + + R + +
Sbjct: 660 SVREGRYAGISSQMDSLNMDSTGPSASNMANAPPSVRNNRVLNPRGASLGHGRMSTSTTN 719
Query: 381 AQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAP 413
QK + N +NS SK +L P
Sbjct: 720 RQKQILNETMGNPVDKNSTSPSKSTDKLDPIKP 752
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/58 (22%), Positives = 25/58 (43%)
Query: 443 IDDERRPRLDSDVGASLSAAGSQTLIDDVDGEEEPDIDDFNRLRSIREQHRRDKYLQK 500
I+D+ + + V + + IDD E D+ + +R E ++ K LQ+
Sbjct: 413 IEDQDNQEISNHVAEEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQE 470
>SPBC16A3.08c |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 284
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 391 VNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPTARSLTARGSFADIDDERRP 449
++V S+N E++ + + + RD +R D P R L A+ + + D +P
Sbjct: 1 MSVASKNLFDLLGEETPAATTTEKKTAASRDKKRSDSPPVPRELVAQSTTSRKRDPNQP 59
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 26.6 bits (56), Expect = 8.9
Identities = 19/87 (21%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 203 TENQREEHPEPSTARVAVPVRQRSMVLTAPS-SVKIDEMVPSNTQIQMSDDAQSGIHFIV 261
+E +E+ E + ++ +P ++R S ++ + S+ +++++D+Q+ IH
Sbjct: 518 SEEANDENDE-TNLKIPIPEKKRKFQEVLQSKNILVSSTEDSHEPVKVTEDSQTAIHV-- 574
Query: 262 HRGSSKRKKEERNSMGSSNSMASLQQT 288
SK + E SM S S+ L ++
Sbjct: 575 ----SKFEDLENKSMESEQSLQLLSES 597
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.128 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,468,861
Number of Sequences: 5004
Number of extensions: 107151
Number of successful extensions: 378
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 355
Number of HSP's gapped (non-prelim): 45
length of query: 549
length of database: 2,362,478
effective HSP length: 76
effective length of query: 473
effective length of database: 1,982,174
effective search space: 937568302
effective search space used: 937568302
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)
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