GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001191-TA|BGIBMGA001191-PA|IPR000615|Bestrophin
         (549 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    25   4.0  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        25   5.2  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   9.1  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   9.1  

>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 25.4 bits (53), Expect = 4.0
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)

Query: 411 SAPNQWGGERDDERDDKSPTARSLTA--RGSFADI 443
           S P +WGG+ D+ R  +SP   ++ A  RG FA +
Sbjct: 35  SEPERWGGQCDNGR-RQSPIDLTIAAAVRGQFAPL 68


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.0 bits (52), Expect = 5.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 383 KPLPPSDPVNVPSRNSNHSSKEDSRLSR 410
           +P PP+ P N PS+    +   D+++S+
Sbjct: 63  RPRPPAPPTNAPSQLPALTPDNDAKISQ 90


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 9.1
 Identities = 21/99 (21%), Positives = 42/99 (42%), Gaps = 4/99 (4%)

Query: 330 ISASNPTLNKPATAGGSMKIA---NEVIEEVDEQATITSM-GKRPDNRPTAMSLFAQKPL 385
           + +  PT +   T+  S K +    + +   D   + TS   +RP +  T+ S  +   L
Sbjct: 3   VISQQPTASSSTTSSSSSKPSPQQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTL 62

Query: 386 PPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDER 424
           P +      + +S++S +   +L R       G+ D +R
Sbjct: 63  PTTSGEPRAAGSSSNSRRNSKQLQRDELAAKMGKHDMKR 101


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 9.1
 Identities = 21/99 (21%), Positives = 42/99 (42%), Gaps = 4/99 (4%)

Query: 330 ISASNPTLNKPATAGGSMKIA---NEVIEEVDEQATITSM-GKRPDNRPTAMSLFAQKPL 385
           + +  PT +   T+  S K +    + +   D   + TS   +RP +  T+ S  +   L
Sbjct: 3   VISQQPTASSSTTSSSSSKPSPQQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTL 62

Query: 386 PPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDER 424
           P +      + +S++S +   +L R       G+ D +R
Sbjct: 63  PTTSGEPRAAGSSSNSRRNSKQLQRDELAAKMGKHDMKR 101


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.128    0.357 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,449
Number of Sequences: 2123
Number of extensions: 21653
Number of successful extensions: 45
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 44
Number of HSP's gapped (non-prelim): 4
length of query: 549
length of database: 516,269
effective HSP length: 67
effective length of query: 482
effective length of database: 374,028
effective search space: 180281496
effective search space used: 180281496
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 50 (24.2 bits)