Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001191-TA|BGIBMGA001191-PA|IPR000615|Bestrophin
(549 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 40 0.006
At2g40070.1 68415.m04923 expressed protein 38 0.017
At5g40590.1 68418.m04926 DC1 domain-containing protein predicted... 36 0.052
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 36 0.069
At3g18230.1 68416.m02319 octicosapeptide/Phox/Bem1p (PB1) domain... 33 0.37
At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related... 33 0.65
At3g06340.1 68416.m00731 DNAJ heat shock N-terminal domain-conta... 33 0.65
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 33 0.65
At3g05980.1 68416.m00683 expressed protein 32 0.85
At2g16470.1 68415.m01887 zinc finger (CCCH-type) family protein ... 32 1.1
At5g16500.1 68418.m01928 protein kinase family protein contains ... 31 2.0
At4g18600.1 68417.m02755 expressed protein 31 2.0
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 31 2.0
At3g32900.1 68416.m04166 Ulp1 protease family protein similar to... 31 2.0
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 31 2.0
At2g02790.1 68415.m00222 calmodulin-binding family protein very ... 31 2.0
At2g01590.1 68415.m00083 expressed protein 31 2.0
At5g21080.1 68418.m02510 expressed protein predicted proteins - ... 31 2.6
At1g52150.2 68414.m05885 homeobox-leucine zipper family protein ... 30 3.4
At1g52150.1 68414.m05884 homeobox-leucine zipper family protein ... 30 3.4
At5g01280.1 68418.m00037 expressed protein 30 4.5
At3g25070.1 68416.m03132 RPM1-interacting protein 4 (RIN4) ident... 30 4.5
At5g13020.1 68418.m01492 emsy N terminus domain-containing prote... 29 6.0
At3g13200.1 68416.m01652 Cwf15 / Cwc15 cell cycle control family... 29 6.0
At2g13370.1 68415.m01476 chromodomain-helicase-DNA-binding famil... 29 6.0
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 29 6.0
At1g66680.1 68414.m07579 S locus-linked protein, putative simila... 29 6.0
At1g32840.1 68414.m04047 Ulp1 protease family protein similar to... 29 6.0
At1g29220.1 68414.m03574 transcriptional regulator family protei... 29 6.0
At1g28050.1 68414.m03434 zinc finger (B-box type) family protein 29 6.0
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta... 29 7.9
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta... 29 7.9
At4g36870.1 68417.m05228 BEL1-like homeobox 2 protein (BLH2) 29 7.9
At4g24480.1 68417.m03509 serine/threonine protein kinase, putati... 29 7.9
At4g11740.1 68417.m01872 ara4-interacting protein, putative (SAY... 29 7.9
At3g57980.1 68416.m06462 DNA-binding bromodomain-containing prot... 29 7.9
At1g32810.1 68414.m04044 expressed protein 29 7.9
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 39.5 bits (88), Expect = 0.006
Identities = 40/242 (16%), Positives = 90/242 (37%), Gaps = 11/242 (4%)
Query: 265 SSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDS 324
S + K+++ + N ++ ++ ++ + E +Q + A+ A +S
Sbjct: 1217 SVEENKKQKETKKEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDES 1276
Query: 325 GNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPTAMS------ 378
N + A + + + S + NE++ + D QAT + + T+++
Sbjct: 1277 KNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRKKQTSVAENKKQK 1336
Query: 379 -LFAQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPTARSLTAR 437
+K P D N ++ +S S+ A NQ + + D L
Sbjct: 1337 ETKEEKNKPKDDKKNTTKQSGGKKESMESE-SKEAENQQKSQATTQADSDESKNEILMQA 1395
Query: 438 GSFADIDDERRPRLDSDVGASLSAAGSQTLI---DDVDGEEEPDIDDFNRLRSIREQHRR 494
S AD + + D L A SQ ++ D +++ + + + + +E+ +
Sbjct: 1396 DSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNK 1455
Query: 495 DK 496
K
Sbjct: 1456 PK 1457
Score = 39.1 bits (87), Expect = 0.007
Identities = 48/243 (19%), Positives = 93/243 (38%), Gaps = 17/243 (6%)
Query: 243 SNTQIQMSDDAQSGIHFIVHRGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKR 302
S +I M D+Q+ H S + K E S + + + SV K+
Sbjct: 1387 SKNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRKKQTSVAENKKQ 1446
Query: 303 LFSKEEQRQPTTASVTATQTDSGNRFTIS-----ASNPTLNKPATAGGSMKIANEVIEEV 357
+KEE+ +P T+ G + ++ A N ++ T G S + NE++ +
Sbjct: 1447 KETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAENQQKSQATTQGESDESKNEILMQA 1506
Query: 358 DEQATITSMGKRPDNRPTAMSLFAQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWG 417
D QA T + D+ + + Q +D +S+ S E + A +Q
Sbjct: 1507 DSQAD-THANSQGDSDESKNEILMQ-----ADSQADSQTDSDESKNE---ILMQADSQAD 1557
Query: 418 GERDDERDDKSPTARSLTARGSFADIDDERRPRLDSDVGASLSAAGSQTLIDDVDGEEEP 477
+ D + + K+ ++ + ++ + + D G + S+T+ +V G E
Sbjct: 1558 SQTDSD-ESKNEILMQADSQAKIGESLEDNKVKGKEDNGDEVGKENSKTI--EVKGRHEE 1614
Query: 478 DID 480
D
Sbjct: 1615 SKD 1617
Score = 37.9 bits (84), Expect = 0.017
Identities = 50/289 (17%), Positives = 114/289 (39%), Gaps = 19/289 (6%)
Query: 267 KRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDSGN 326
++KK+E+ S + + SV K+ +K+E+ +P T+ G
Sbjct: 1189 QQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNKPKDDKKNTTKQSGGK 1248
Query: 327 RFTI-----SASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPTAMSLFA 381
+ ++ A N ++ T S + NE++ + D QA S + D+ + +
Sbjct: 1249 KESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHS-DSQADSDESKNEILM 1307
Query: 382 QKPLPPSDPVNVPSRNSNHSSKEDSRLSRS-APNQWGGERDDERDDKSPTARSLTARGSF 440
Q +D RN+ K+ + ++ + + E++ +DDK T + + G
Sbjct: 1308 Q-----ADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTTKQ--SGGKK 1360
Query: 441 ADIDDERRPRLDSDVGASLSAAGSQTLIDDVDGEEEPDIDDFNRLRSIREQHRRDKYLQK 500
++ E + + + + A S +++ + + D + ++ ++ + + +Q
Sbjct: 1361 ESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDESKNEILMQ- 1419
Query: 501 LMARSVSAQQRTGSGEIXXXXXXXXXXXIQSGALKKEENHINGSKEDTT 549
A S + QR + E + K+E+N K++TT
Sbjct: 1420 --ADSQATTQR--NNEEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTT 1464
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 37.9 bits (84), Expect = 0.017
Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 7/149 (4%)
Query: 264 GSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTD 323
GS R+S ++NS +S TP +R +V+S + S R +A+ T
Sbjct: 183 GSRPATPTGRSSTLTANSKSSRPSTPTSRA-TVSSATRP--SLTNSRSTVSATTKPTPMS 239
Query: 324 SGNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPTAMSLFAQK 383
+ S PT +KP T+ + + A V T S G P + S A+
Sbjct: 240 RSTSLSSSRLTPTASKPTTS--TARSAGSVTRST-PSTTTKSAGPSRSTTPLSRST-ARS 295
Query: 384 PLPPSDPVNVPSRNSNHSSKEDSRLSRSA 412
P S P PS+ + SS R SA
Sbjct: 296 STPTSRPTLPPSKTISRSSTPTRRPIASA 324
>At5g40590.1 68418.m04926 DC1 domain-containing protein predicted
protein, Arabidopsis thaliana
Length = 234
Score = 36.3 bits (80), Expect = 0.052
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 206 QREEHPEPSTARVAVPVRQRSMVLTAPSSVKIDEMVPSNTQIQMSDDAQSGIHFIVHRGS 265
+RE+HP P T P Q +V +++VP N + H +
Sbjct: 119 KREDHPHPLTLLYGSPYNQPGLVSKCDVC---EDIVPDNLWSYYCKECDYATHLHSCKKE 175
Query: 266 SKRKKEERNSMGSSNSMAS 284
+ KKE++ GS NSM S
Sbjct: 176 EEAKKEDQKGEGSKNSMNS 194
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 35.9 bits (79), Expect = 0.069
Identities = 55/279 (19%), Positives = 109/279 (39%), Gaps = 20/279 (7%)
Query: 265 SSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDS 324
S+KR +EE+ + ++++ T R SV + +K+++ P+ S T S
Sbjct: 242 STKRNEEEKTDDSLDVTSSTVKTTQHTRRLSVQDRINLFENKQKENSPSGGSKPVAVTKS 301
Query: 325 GNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPTAMSLFAQKP 384
+S+ + KP S I +++ ++ + + S + P + T+ SL
Sbjct: 302 TELRRLSSDVSSSEKPILRRSS--IVSDMSTDLASEKKLESFPEDPSS--TSSSL----- 352
Query: 385 LPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERD-DKSPTARSLTARGSFADI 443
P + N N S K+D + + D+E D+ +++++T + +
Sbjct: 353 -----PHTIAQPNFNESVKKDDEVKYELKSDSEKVGDEEASRDRVESSKTVTETRLVSGV 407
Query: 444 DDERRPRLDSDVGASLSAAGSQTLIDDVDGEEEPDIDDFNRLRSIREQHRRDKYLQKLMA 503
+ + S + ++S+A VD + D +R R +H+ + Q A
Sbjct: 408 EATSYVQSRSVIDPNVSSASQNQTERHVDRLQNVMSDAKSRQREEGYEHKANNVSQS-SA 466
Query: 504 RSVSAQQRTGSGEIXXXXXXXXXXXIQS----GALKKEE 538
S R+ S I QS G +KK+E
Sbjct: 467 MFPSRHTRSQSAHIEASFKEDVASQPQSRYSFGRIKKKE 505
>At3g18230.1 68416.m02319 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 666
Score = 33.5 bits (73), Expect = 0.37
Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 5/123 (4%)
Query: 274 NSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDSGNRFTISAS 333
+S+GSS+S S P R S +R+ EEQ T S TQ + ++ A+
Sbjct: 272 SSIGSSSSSPSTSNLPPIRVR--VSEDQRI---EEQLAQMTFSNMQTQRQFDDGVSLMAN 326
Query: 334 NPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPTAMSLFAQKPLPPSDPVNV 393
P + P + N + A+ + D +S +KP P PV +
Sbjct: 327 RPMMIPPGAMNDAAMAYNNAPGDGTAPASNGHVSPEDDRSELGVSTGYRKPPLPMQPVTI 386
Query: 394 PSR 396
P R
Sbjct: 387 PPR 389
>At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related
similar to storekeeper protein GI:14268476 [Solanum
tuberosum]
Length = 328
Score = 32.7 bits (71), Expect = 0.65
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 6/119 (5%)
Query: 326 NRFTISASNPTLNKPATAGGSMKIANE------VIEEVDEQATITSMGKRPDNRPTAMSL 379
+RF+ A N TL P+T S +A+ V + + +TS K+P + S
Sbjct: 25 SRFSPMAKNKTLVTPSTVKKSSDVASTSKKLSGVASPAKKPSGVTSPVKKPLEAVASTSS 84
Query: 380 FAQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPTARSLTARG 438
++ PS S + + + E L+ +AP+ +R E + A++ T G
Sbjct: 85 EEEEEDEPSSDSESGSESESDTEAEPMTLAAAAPSSSNEKRQSEGKPEEERAKTETETG 143
>At3g06340.1 68416.m00731 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 673
Score = 32.7 bits (71), Expect = 0.65
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 359 EQATITSMGKRPDNRPTAMSLFAQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGG 418
+Q + KRP+N PT S A P+P S N K + S S+ ++
Sbjct: 255 DQRACSEPHKRPENPPTVSSSKASFPMPGS----TAKHNGKRKRKNVAECSESSDSESSS 310
Query: 419 ERDDERDDKSPTARSLTARG 438
E +D+ ++ + A+ + G
Sbjct: 311 ESEDDVNNDTTAAQDSGSNG 330
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 32.7 bits (71), Expect = 0.65
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Query: 305 SKEEQRQPTTASVTATQTDSGNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATIT 364
S E + PT +S + Q N + A P + P T+ + ++ E +
Sbjct: 696 SSEPTQVPTPSSSESYQAP--NLSPVQAPTP-VQAPTTSSETSQVPTPSSESNQSPSQAP 752
Query: 365 SMGKRPDNRPTAMSLFAQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSA 412
+ P + PT S Q P P S+PV+ P ++ + E + ++ S+
Sbjct: 753 TPILEPVHAPTPNSKPVQSPTPSSEPVSSPEQSEEVEAPEPTPVNPSS 800
>At3g05980.1 68416.m00683 expressed protein
Length = 245
Score = 32.3 bits (70), Expect = 0.85
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Query: 267 KRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDSGN 326
K+K +E N+ + + + + P R T + K L ++QR P+++ VTA S +
Sbjct: 111 KKKDQEINNRDNRVTWF-IDEDPSPRPPKCTVLWKELLRLKKQRNPSSSPVTARTVSSLS 169
Query: 327 RFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRP-DNRPTAMSLFAQKPL 385
+ ++S+ +L A K + + E+ SM RP + P + PL
Sbjct: 170 PSSSTSSSSSLEDAAKREEKEKEGKRGKKGL-ERTRSASMRIRPMIHVPICTPSKSSLPL 228
Query: 386 PPSDPVNV 393
PP P+++
Sbjct: 229 PPLFPLSL 236
>At2g16470.1 68415.m01887 zinc finger (CCCH-type) family protein /
GYF domain-containing protein contains Pfam domains
PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and
similar), PF02213: GYF domain
Length = 659
Score = 31.9 bits (69), Expect = 1.1
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 11/123 (8%)
Query: 312 PTTASVTATQTDSGNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPD 371
PT +T T T F S +PT P +A SM + V + Q TS P
Sbjct: 310 PTPNQIT-TPTAKRRNFE-SRWSPTKPSPQSANQSMNYS--VAQSGQSQ---TSRIDIPV 362
Query: 372 NRPTAMSLFAQK-PLPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPT 430
+A +L Q P+P DP+NV + NHS+ S WG + D +P+
Sbjct: 363 VVNSAGALQPQTYPIPTPDPINV---SVNHSATLHSPTPAGGKQSWGSMQTDHGGSNTPS 419
Query: 431 ARS 433
+++
Sbjct: 420 SQN 422
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 31.1 bits (67), Expect = 2.0
Identities = 63/289 (21%), Positives = 106/289 (36%), Gaps = 22/289 (7%)
Query: 212 EPSTARVAVPVRQRSMVLTAPSSVKIDEMVPSNTQIQMSDDAQSGIHFIVHRGSSKRKK- 270
E TAR P+ MV + S+ ++ +P+ ++ D I H S
Sbjct: 334 EEPTAR---PLISDVMVALSFLSMSTEDGIPATVPMESFRDKSMSIALSRHGSCSVTPFC 390
Query: 271 EERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDSGNRFTI 330
R +G+ +S +S + + SK+ Q Q TA+ + ++DS +
Sbjct: 391 ISRKDVGNKSSSSSDSEDEEEEKEQKAEKEEESTSKKRQEQEETATDSDDESDSNSEKDQ 450
Query: 331 SASNPTLNKPATAGGSMKIANEVIEEVDE-QATITSMGKRPDNRPTAMSLFAQKPLPPSD 389
L K + S + +DE AT S+ + S ++ + D
Sbjct: 451 EEEQSQLEKARESSSSSSDSGSERRSIDETNATAQSL-------KISYSNYSSE---EED 500
Query: 390 PVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPTARSLTARGSFADIDD--ER 447
+ S+ S+ S E+S SR G + DD + S SL D ++ E
Sbjct: 501 NEKLSSK-SSCKSNEESTFSR---YDSGRDHDDSSRNTSMRINSLAHDDKEEDEEENHET 556
Query: 448 RPRLDSDVGASLSAAGSQTLIDDVDGEEEPDIDDFNRLRSIREQHRRDK 496
R D D ++ +L D D EEE + + RL I D+
Sbjct: 557 RSYSDHDDSPRNTSMRINSLSHD-DDEEEEEENHQTRLEHIHSSKSEDQ 604
>At4g18600.1 68417.m02755 expressed protein
Length = 1907
Score = 31.1 bits (67), Expect = 2.0
Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 2/128 (1%)
Query: 350 ANEVIEEVDEQATITSMGKRPDNRPTAMSLFAQKPLPPSDPVNVPSRNSNHSSKEDSRLS 409
A+ V +E E R D+ P+ + P+ P D V++ + S + +
Sbjct: 285 ASNVCDEKKETLESMVEKSRKDDEPSELHESKFGPVTP-DRVDIVGEKQSKSQANNIDGT 343
Query: 410 RSAPNQWGGERDDERD-DKSPTARSLTARGSFADIDDERRPRLDSDVGASLSAAGSQTLI 468
N+ + + E + D+ AR+ S +DID +P+L+ G +
Sbjct: 344 LGIENEGEDKSEQESEADEFVDARNTIESESESDIDGVPKPKLEHYFGDISTYCSEDANS 403
Query: 469 DDVDGEEE 476
D+ DG E+
Sbjct: 404 DNNDGSED 411
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 31.1 bits (67), Expect = 2.0
Identities = 32/143 (22%), Positives = 50/143 (34%), Gaps = 13/143 (9%)
Query: 306 KEEQRQPTTASVTATQTDSGNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITS 365
K ++ TT T +T + + T A+ T PAT + I E T +
Sbjct: 6 KRKRGVGTTVKSTTEETATATKETAPATKETA--PATKETAPTITKE---------TAPT 54
Query: 366 MGKRPDNRPTAMSLFAQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERD 425
P + TA + + L DP NV S KE+ + GE ++E +
Sbjct: 55 KETAPATKETAPTRTEEPSLTEQDPENVEEEESEEEEKEEEEKEEEEEEE--GEEEEEEE 112
Query: 426 DKSPTARSLTARGSFADIDDERR 448
++ G DD R
Sbjct: 113 EEEEEKEEEENVGGEESSDDSTR 135
>At3g32900.1 68416.m04166 Ulp1 protease family protein similar to
At1g32840, At4g04010, At2g06430, At2g15140, At2g04980,
At2g14130, At3g44500, At2g15190, At3g47260, At5g34900,
At3g29210, At2g02210
Length = 654
Score = 31.1 bits (67), Expect = 2.0
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 395 SRNSNHSSKEDSRLSRSAPNQWGGERDD-ERDDKSPTARSLTA 436
+ N N S ++ R + + G+ ++ +RDDKSPT RS TA
Sbjct: 248 AENDNESFEDSIREPNTQYGSYPGDDENTQRDDKSPTLRSSTA 290
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 31.1 bits (67), Expect = 2.0
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 14/239 (5%)
Query: 250 SDDAQSGIHFIVHRGSSKRKKEERNSMGSSNSMASLQQ--TPMNRTNSVTSMLKRLFSKE 307
+ D S + F++ + K +K E++ S + + TPM + + ML+RL S
Sbjct: 310 NQDIASSVDFLIEERAKKAQKREQDLQRQSEILEQKKYGVTPMKKAVDM-QMLERLVSIG 368
Query: 308 EQRQPTTASVTATQTDSGNRFTISASNPTLNKPATAGGSMKIANEVIEEVD-EQATITSM 366
R+ S+ + D I ++P +N A + + V A + SM
Sbjct: 369 YARELAAESLRRNENDIQKALDI-LTDPKVNSTIQAYIESRKRKRQEQLVGISVAELVSM 427
Query: 367 GKRPDNRPTAMSLFA------QKPLPPS--DPVNVPSRNSNHSSKEDSRLSRSAPNQWGG 418
G +A+ Q+ L S +P + N +S ++ + S+ G
Sbjct: 428 GFERGKATSALEAGGSREDTIQRLLSASVANPGTTTTSVINATSSTNNVGAESSGFGGGA 487
Query: 419 ERDDERDDKSPTARSLTARGSFADIDDERRPRLDSDVGASLSAAGSQTLID-DVDGEEE 476
E+D E D++ + A S +++ER ++ ++ ++ + + D ++D E E
Sbjct: 488 EQDSEMKDETTDDIANRASTSSDGMEEERDSEIEDEIADEIARVDALSAYDINLDKEIE 546
>At2g02790.1 68415.m00222 calmodulin-binding family protein very low
similarity to SP|P12036 Neurofilament triplet H protein
{Homo sapiens}; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 636
Score = 31.1 bits (67), Expect = 2.0
Identities = 46/247 (18%), Positives = 92/247 (37%), Gaps = 7/247 (2%)
Query: 198 PYTLATENQREEHPEPSTARVAVPVRQRSMVLTAPSSVKIDEMVPSNTQIQMSDDAQSGI 257
P TL + Q +P++A+V + R + + AP + + +VP + + S A
Sbjct: 217 PTTLPLKIQYSPE-DPNSAKVWLG-RWTQLQVWAPGPLVVKNLVPKSQTKKRSFQAVEAE 274
Query: 258 HFIVHRGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASV 317
+ RG K + S++ + + P +++ K L E + ++
Sbjct: 275 KGKLKRGVRKPTGVSTTANSSTSRSTADNEKPKRTVRKASTLGKELSKIENDKSKQSSRK 334
Query: 318 TATQTDSGNRFTISASNPTLN--KPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPT 375
+ + G+ + P ++ K + + G K + E+ E A ++ K
Sbjct: 335 STSAIKEGSSVEVKDEKPRISHKKASLSNGIGKATRKSAEKKKEIA--DAVQKELPIEEV 392
Query: 376 AMSLFAQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPTARSLT 435
++SL + + V + K++ L P Q R ERDDK+
Sbjct: 393 SVSLVDAPEDEKMNLIPVTISKESDLDKDEKSLVLDKPEQ-DELRTAERDDKAEEELKTA 451
Query: 436 ARGSFAD 442
R A+
Sbjct: 452 ERDDSAE 458
>At2g01590.1 68415.m00083 expressed protein
Length = 174
Score = 31.1 bits (67), Expect = 2.0
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 374 PTAMSLF--AQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPTA 431
PT SL + PLP S P +PS S SK+ +L R Q G + R +K A
Sbjct: 16 PTMASLTNDSPSPLPSSSPSKLPSPTS--PSKKPLKL-RQVSKQMGSQNQQRRGNKPSIA 72
Query: 432 RSLTARGSFADIDDE 446
+ A GS + D E
Sbjct: 73 QIERAFGSGSYRDSE 87
>At5g21080.1 68418.m02510 expressed protein predicted proteins -
Arabidopsis thaliana; expression supported by MPSS
Length = 980
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 287 QTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDSGN 326
+ P N T+SV S LK +S+ + + +S+ A Q SG+
Sbjct: 563 EEPKNNTSSVLSRLKSSYSRSQSVKRNPSSMVADQNSSGS 602
>At1g52150.2 68414.m05885 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
to HD-zip transcription factor (athb-8) (GI:7270235)
[Arabidopsis thaliana]; contains Pfam profiles PF01852:
START domain, PF00046: Homeobox domain
Length = 837
Score = 30.3 bits (65), Expect = 3.4
Identities = 28/142 (19%), Positives = 61/142 (42%), Gaps = 9/142 (6%)
Query: 232 PSSVKIDEMVPSNTQIQMSDDAQSGIHFIVHRGSSKRKKEERNSMGSSNSMASLQQTPMN 291
PSS++ +++ + + Q + F R K++KE + + ++ + M
Sbjct: 39 PSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLME 98
Query: 292 RTNSVTSMLKRLFSKEEQ-RQPT-TASVTATQTD-----SGNRFTISASNPTLNKPATAG 344
+ + + +L + RQ T S+ A T + + +++ NP + A+
Sbjct: 99 ENDRLQKQVSQLVHENSYFRQHTPNPSLPAKDTSCESVVTSGQHQLASQNP--QRDASPA 156
Query: 345 GSMKIANEVIEEVDEQATITSM 366
G + IA E + E +AT T++
Sbjct: 157 GLLSIAEETLAEFLSKATGTAV 178
>At1g52150.1 68414.m05884 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
to HD-zip transcription factor (athb-8) (GI:7270235)
[Arabidopsis thaliana]; contains Pfam profiles PF01852:
START domain, PF00046: Homeobox domain
Length = 836
Score = 30.3 bits (65), Expect = 3.4
Identities = 28/142 (19%), Positives = 61/142 (42%), Gaps = 9/142 (6%)
Query: 232 PSSVKIDEMVPSNTQIQMSDDAQSGIHFIVHRGSSKRKKEERNSMGSSNSMASLQQTPMN 291
PSS++ +++ + + Q + F R K++KE + + ++ + M
Sbjct: 39 PSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLME 98
Query: 292 RTNSVTSMLKRLFSKEEQ-RQPT-TASVTATQTD-----SGNRFTISASNPTLNKPATAG 344
+ + + +L + RQ T S+ A T + + +++ NP + A+
Sbjct: 99 ENDRLQKQVSQLVHENSYFRQHTPNPSLPAKDTSCESVVTSGQHQLASQNP--QRDASPA 156
Query: 345 GSMKIANEVIEEVDEQATITSM 366
G + IA E + E +AT T++
Sbjct: 157 GLLSIAEETLAEFLSKATGTAV 178
>At5g01280.1 68418.m00037 expressed protein
Length = 460
Score = 29.9 bits (64), Expect = 4.5
Identities = 41/154 (26%), Positives = 57/154 (37%), Gaps = 18/154 (11%)
Query: 250 SDDAQSGIHFIVHRGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQ 309
S + SGI SS+ S + A TP +R S T+
Sbjct: 75 SSSSVSGIRRPSSSSSSRSTSRPPTPTRKSKTPAKRPSTPTSRATSTTT----------- 123
Query: 310 RQPTTASVTATQTDSGNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKR 369
R T+S T + T S +R + S+ T TA A D+Q T ++ R
Sbjct: 124 RATLTSSSTTSSTRSWSRPSSSSGTGTSRVTLTAAR----ATRPTTSTDQQTTGSATSTR 179
Query: 370 PDNRPTAMSLFAQKP-LPPSDPVNVPSRNSNHSS 402
+NRP MS KP S P PS + S+
Sbjct: 180 SNNRP--MSAPNSKPGSRSSTPTRRPSTPNGSST 211
>At3g25070.1 68416.m03132 RPM1-interacting protein 4 (RIN4)
identical to SP|Q8GYN5 RPM1-interacting protein 4
{Arabidopsis thaliana}
Length = 211
Score = 29.9 bits (64), Expect = 4.5
Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 270 KEERNSMGSSNSMASLQQTPMNRTNSVTS---MLKRLFSKEEQRQPTTASVTATQTDSGN 326
K+ ++ GSSN A+ +Q ++ NS + + K + + +P ++ A ++
Sbjct: 86 KQFGDAGGSSNEAANKRQGRASQNNSYDNKSPLHKNSYDGTGKSRPKPTNLRADESPEKV 145
Query: 327 RFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNR 373
+ N P++A G I N+V EE A ++ + P ++
Sbjct: 146 TVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQ 192
>At5g13020.1 68418.m01492 emsy N terminus domain-containing protein
/ ENT domain-containing protein contains Pfam profile
PF03735: ENT domain
Length = 397
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 233 SSVKIDEMVPSNTQIQMSDDAQSGIHFIVHRGSSKRKKEERNSMGSSNSMASLQQTP 289
S V DEM+ + + ++ QS + +VH S R +S S+ASL P
Sbjct: 103 SRVNADEMIRRIREWRKANSLQSSVPQLVHDAPSPAVSGSRKKQKTSQSIASLAMGP 159
>At3g13200.1 68416.m01652 Cwf15 / Cwc15 cell cycle control family
protein contains Pfam profile PF04889: Cwf15/Cwc15 cell
cycle control protein; similar to Cell cycle control
protein cwf15 (Swiss-Prot:P78794) [Schizosaccharomyces
pombe]
Length = 230
Score = 29.5 bits (63), Expect = 6.0
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 394 PSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPTARSLTARGSFADIDDERRPRLDS 453
P R H+ +E +++ + R DKS RGS ++D +R +
Sbjct: 43 PRREGQHTQEELQKINLRDELEERERRHFSSKDKSYNDDRDRRRGSQLLLEDSKRDPEER 102
Query: 454 DVGASLSAAGSQTLI---DDVDGE-EEPDIDDFNRLRSIREQHRRDKYLQKL 501
+ S+ A S I DD D E ++ D DD L + +Q ++++ ++L
Sbjct: 103 IIPRSVDADDSDVDIKSDDDSDDESDDDDEDDTEALMAELDQIKKERVEERL 154
>At2g13370.1 68415.m01476 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to SP|O14647
Chromodomain-helicase-DNA-binding protein 2 (CHD-2)
{Homo sapiens}; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00385: 'chromo' (CHRromatin
Organization MOdifier)
Length = 1722
Score = 29.5 bits (63), Expect = 6.0
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 396 RNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPTARSLTARGSFADIDDERRPRLDSDV 455
R S H S SR R Q +D +D RSL RG+ ++ R
Sbjct: 321 RKSFHVS---SRQKRKTSYQDDDSEEDSENDNDEGFRSLARRGTTLRQNNGRSTNTIGQS 377
Query: 456 GASLSAAGSQTLIDDVDGEEEPDIDD 481
S+ S + V+ E+ DIDD
Sbjct: 378 SEVRSSTRSVRKVSYVESEDSEDIDD 403
>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
domain-containing protein contains Pfam domains PF00226:
DnaJ domain and PF00096: Zinc finger, C2H2 type
Length = 630
Score = 29.5 bits (63), Expect = 6.0
Identities = 34/153 (22%), Positives = 65/153 (42%), Gaps = 9/153 (5%)
Query: 140 KVAE--SLINPFGEDDDDFEVNWIIDRDLQVSYM---IVDEMHHEHPEL-VKDQYWDEVF 193
KVAE + E++++ E++ +D V + + +E++ ++ E VK + E
Sbjct: 335 KVAELRESFTDYEEENEEEEIDGPLDSPESVEELHEKLQEELNIDNEERDVKKEVVGEAD 394
Query: 194 PSELPYTLATEN-QREEHPEPSTARVAVPVRQRSMVLTAPSSVKIDEMVPSNTQIQMSDD 252
++ Y +A E+ Q E + + + S +V E T++++ D
Sbjct: 395 ETDDEYFVAEEDMQGSSESEDEDDEMTLLKKMVSGQKNKQKNVVSKEEDEDETEVEIEGD 454
Query: 253 AQSGIHFIVHR--GSSKRKKEERNSMGSSNSMA 283
F + G +K KEERN + N MA
Sbjct: 455 TAEFSEFDNQKSTGRNKEAKEERNKQNAGNDMA 487
>At1g66680.1 68414.m07579 S locus-linked protein, putative similar
to S locus-linked protein SLL2 [Brassica napus]
GI:1518113
Length = 358
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 425 DDKSPTARSLTARGSFAD-IDDERRPRLDSDVGASLSAAGSQTLIDDVDGEEEPDID 480
DD+S A S + + + +DD++R +D +LS+A + D +EEPD D
Sbjct: 37 DDRSIAADSWSIKSEYGSTLDDDQR---HADAAEALSSANFRVSSDYSSDKEEPDAD 90
>At1g32840.1 68414.m04047 Ulp1 protease family protein similar to
At4g04010, At2g06430, At2g15140, At2g04980, At2g14130,
At3g44500, At2g15190, At3g47260, At5g34900, At3g29210,
At2g02210, At3g32900
Length = 611
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 395 SRNSNHSSKEDSRLSRSAPNQWGGERDD-ERDDKSPTARSLT 435
+ N N S ++ R + + G+ ++ +RDDKSPT RS T
Sbjct: 208 AENDNESFEDSIREPNTQYGSYPGDDENTQRDDKSPTPRSST 249
>At1g29220.1 68414.m03574 transcriptional regulator family protein
similar to Transcriptional regulator protein HCNGP
(Swiss-Prot:Q02614) [Mus musculus]
Length = 351
Score = 29.5 bits (63), Expect = 6.0
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 444 DDERRPRLDSDVGASLSAAGSQTLIDDVDGEEEPD 478
+D R PRL VGAS SA G+ +D+ D PD
Sbjct: 67 EDSRTPRLLDGVGASSSAHGTPRSLDN-DESSRPD 100
>At1g28050.1 68414.m03434 zinc finger (B-box type) family protein
Length = 433
Score = 29.5 bits (63), Expect = 6.0
Identities = 22/94 (23%), Positives = 38/94 (40%)
Query: 290 MNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDSGNRFTISASNPTLNKPATAGGSMKI 349
MN T S + K++ ++ T+ V T+++S NR S N + + I
Sbjct: 302 MNETCSTNVKGVKEIKKDDYKRSTSGQVQPTKSESNNRPITFGSEKGSNSSSDLHFTEHI 361
Query: 350 ANEVIEEVDEQATITSMGKRPDNRPTAMSLFAQK 383
A + AT + + NR AM + +K
Sbjct: 362 AGTSCKTTRLVATKADLERLAQNRGDAMQRYKEK 395
>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 29.1 bits (62), Expect = 7.9
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 370 PDNRPTAMSLF--AQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDK 427
P N P A AQK PP+ N P++ +N +++++ Q G D+
Sbjct: 165 PRNNPPAQKTNPPAQKTNPPAQKTNPPAQKNNPPTQKNNPQKPVGTTQKTGRTDNH---- 220
Query: 428 SPTARSLTARGS 439
+ T S TA GS
Sbjct: 221 TTTPNSFTASGS 232
>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 29.1 bits (62), Expect = 7.9
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 370 PDNRPTAMSLF--AQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDK 427
P N P A AQK PP+ N P++ +N +++++ Q G D+
Sbjct: 165 PRNNPPAQKTNPPAQKTNPPAQKTNPPAQKNNPPTQKNNPQKPVGTTQKTGRTDNH---- 220
Query: 428 SPTARSLTARGS 439
+ T S TA GS
Sbjct: 221 TTTPNSFTASGS 232
>At4g36870.1 68417.m05228 BEL1-like homeobox 2 protein (BLH2)
Length = 638
Score = 29.1 bits (62), Expect = 7.9
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 344 GGSMKIANEVIEEVDEQATITSMGKRPDNRPTAMSLFAQKPLPPSDPVNVPSRNSNHSSK 403
G S + +++EE + + AM LF P PP P + S S S
Sbjct: 106 GQSFRSNRQLLEEQHQNIPAMNATDSATATAAAMQLFLMNPPPPQQPPSPSSTTSPRSHH 165
Query: 404 EDSRLSRSAPN 414
S L P+
Sbjct: 166 NSSTLHMLLPS 176
>At4g24480.1 68417.m03509 serine/threonine protein kinase, putative
similar to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 963
Score = 29.1 bits (62), Expect = 7.9
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 387 PSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDDKSPTARSLTA-RGSF--ADI 443
P+DP +P+ +S S + +R ++ +R +R+ P S ++ GSF
Sbjct: 144 PADPAPLPATSSPDSIIDSARTVNI--HERNIDRSFDREVSLPRMSSESSFAGSFFSGTT 201
Query: 444 DDERRPRLDSDVGASLSAAGSQTLIDDVDGEEEPDIDDFNRLRSIREQHRRDKYLQKLMA 503
D S A ++ + TL+ EEE ++ + + +S+ ++ R YLQ +A
Sbjct: 202 VDGNFSNFSSHTDARETS--TTTLVSVNKEEEEVEVREQGKEQSLAQKSREGYYLQVTLA 259
Query: 504 RSVSAQ 509
+ +S+Q
Sbjct: 260 KWLSSQ 265
>At4g11740.1 68417.m01872 ara4-interacting protein, putative (SAY1)
similar to Ara4-interacting protein [Arabidopsis
thaliana] GI:13160609; contains Pfam profiles PF00789:
UBX domain, PF02809: Ubiquitin interaction motif
Length = 564
Score = 29.1 bits (62), Expect = 7.9
Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 14/159 (8%)
Query: 272 ERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTATQTDSGNRFTIS 331
++ + GSSN + + M + + + E+ + A+ ++ G +
Sbjct: 211 KKEAEGSSNPLLEERPLHMEDDDDIAIAVTMSLKSAEEEVLRSQGYKASTSEIGASAVTA 270
Query: 332 ASNP----TLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPTAMSLFAQKPLPP 387
A P LN A S ++ ++VDEQ + +RP + + P P
Sbjct: 271 AQGPQDTQALNGRLAAPSSP--FDDDSDDVDEQPLVR-------HRPRRAASGSLAP-PN 320
Query: 388 SDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGERDDERDD 426
+D S H+S + P++WGG +E D+
Sbjct: 321 ADRSRSGSPEEEHASINPAERGSGFPSEWGGISSEEHDE 359
>At3g57980.1 68416.m06462 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 632
Score = 29.1 bits (62), Expect = 7.9
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Query: 346 SMKIANEVIEEVDEQATITSMGKRPDNRPTAMSLFAQKPLPPSDPVNVPSRNSNHSSKED 405
S+K N ++ + E T + + +N ++ P P + S N+N + K
Sbjct: 115 SLKTENSDLDRIAE--TKENHTESGNNSGVPVTELKNSPDPNDNSPGTGSENTNRAVKIA 172
Query: 406 SRLSRSAPNQWGGERDDERDDKSPTARSLTARGSFADIDDERRPRLDSDVGASLSAAGSQ 465
+ PN+ GGE +DE+ + + R + S A D P+ + + L +
Sbjct: 173 EPVDEE-PNRIGGEDNDEKPAREDSGRG--SCESVAKESDRAEPKREGNDSPELVES--- 226
Query: 466 TLIDDVDGEEE 476
+D+ GEE+
Sbjct: 227 --MDESKGEED 235
>At1g32810.1 68414.m04044 expressed protein
Length = 654
Score = 29.1 bits (62), Expect = 7.9
Identities = 56/268 (20%), Positives = 109/268 (40%), Gaps = 17/268 (6%)
Query: 202 ATENQREEHPEPSTARVAVP-VRQRSMVLTAPSSVKIDEMVPSNTQIQMSDDAQSGIHFI 260
++ + E+ P+PST+R ++P ++Q+ ++ ++ V S+ + D +
Sbjct: 155 SSSSATEKSPKPSTSRNSIPGLKQQPGDDDNDANTNDEDCVSSDVIRERDGDDEPSEKAP 214
Query: 261 VH-RGSSKRKKEERNSMGSSNSMASLQQTPMNRTNSVTSMLKRLFSKEEQRQPTTASVTA 319
H + S KK +++ S +S++ +++ + S + + S+ + + +
Sbjct: 215 KHPKFSITSKKSMQHNRTSHSSVSKTRESSSSSKTSSATRINGGSSEAPSKHSLSGTFPK 274
Query: 320 TQTDSGNRFTISASNPTLNKPATAGGSMKIANEVIEEVDEQATITSMGKRPDNRPTAMSL 379
+ + F S NP + + A E+ + Q + S + P R M
Sbjct: 275 NEKPGQSIFQSSTKNPVQSIISLAPNLSD--EELALRLHHQ--LNSSPRVP--RVPRMRQ 328
Query: 380 FAQKPLPPSDPVNVPSRNSNHSSKEDSRLSRSAPNQWGGE-RDDERDDKSPTARSLTARG 438
PL P+ P R S+ SK+ + SR E + RDD + RS R
Sbjct: 329 PGSLPLSPTAPSF--KRTSSSGSKDHTTFSRRKNKDTSKEGYCNLRDDDRCSTRSAKNRR 386
Query: 439 SFADIDDERRPRLDS-DVGASLSAAGSQ 465
S +RR + DS G SL + G +
Sbjct: 387 S-----PDRRTQQDSGSRGGSLCSKGEE 409
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.128 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,731,988
Number of Sequences: 28952
Number of extensions: 552505
Number of successful extensions: 1763
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1736
Number of HSP's gapped (non-prelim): 50
length of query: 549
length of database: 12,070,560
effective HSP length: 85
effective length of query: 464
effective length of database: 9,609,640
effective search space: 4458872960
effective search space used: 4458872960
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -