GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001190-TA|BGIBMGA001190-PA|undefined
         (633 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050537-1|AAH50537.2|  463|Homo sapiens FLJ20160 protein protein.     73   2e-12
AK127176-1|BAC86869.1|  791|Homo sapiens protein ( Homo sapiens ...    73   2e-12
AK000167-1|BAA90987.1|  463|Homo sapiens protein ( Homo sapiens ...    73   2e-12
AC093388-1|AAY24173.1|  463|Homo sapiens unknown protein.              73   2e-12

>BC050537-1|AAH50537.2|  463|Homo sapiens FLJ20160 protein protein.
          Length = 463

 Score = 73.3 bits (172), Expect = 2e-12
 Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 1/176 (0%)

Query: 409 AVFVVVALLGILWSGIDAYLPWTVEEMNGTYTEVGLTLTAGALPAVPALWWAEALVDYIG 468
           +V  V   +G  +  +  +L W +E++NGT T  G+      +  + A +++  L++ IG
Sbjct: 121 SVLFVAWFMGFGYGFVFTFLYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIG 180

Query: 469 HSNVFILAFTFYGLRYTGLASSNEYSLVAVCEILEVFTLSLVWVTAILYFRHLIPRKYTT 528
           H  V  +       RY  ++       V   E+L+  T + +W   I Y    +P +  T
Sbjct: 181 HIRVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRT 240

Query: 529 TGQALPVIAHFCLGRCIGAIISGMVSLQLQSARVTYEALGVVSLLVAAIYLTLYHL 584
           + Q +    H  LGR  GA+I G V +    A  T+  +G+  L++  ++  +  L
Sbjct: 241 SAQGILQGLHLGLGRGCGAMIGG-VLVNYFGAAATFRGIGMACLVILLLFALIQWL 295


>AK127176-1|BAC86869.1|  791|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45241 fis, clone BRCOC2006164. ).
          Length = 791

 Score = 73.3 bits (172), Expect = 2e-12
 Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 1/176 (0%)

Query: 409 AVFVVVALLGILWSGIDAYLPWTVEEMNGTYTEVGLTLTAGALPAVPALWWAEALVDYIG 468
           +V  V   +G  +  +  +L W +E++NGT T  G+      +  + A +++  L++ IG
Sbjct: 449 SVLFVAWFMGFGYGFVFTFLYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIG 508

Query: 469 HSNVFILAFTFYGLRYTGLASSNEYSLVAVCEILEVFTLSLVWVTAILYFRHLIPRKYTT 528
           H  V  +       RY  ++       V   E+L+  T + +W   I Y    +P +  T
Sbjct: 509 HIRVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRT 568

Query: 529 TGQALPVIAHFCLGRCIGAIISGMVSLQLQSARVTYEALGVVSLLVAAIYLTLYHL 584
           + Q +    H  LGR  GA+I G V +    A  T+  +G+  L++  ++  +  L
Sbjct: 569 SAQGILQGLHLGLGRGCGAMIGG-VLVNYFGAAATFRGIGMACLVILLLFALIQWL 623


>AK000167-1|BAA90987.1|  463|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20160 fis, clone COL09072. ).
          Length = 463

 Score = 73.3 bits (172), Expect = 2e-12
 Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 1/176 (0%)

Query: 409 AVFVVVALLGILWSGIDAYLPWTVEEMNGTYTEVGLTLTAGALPAVPALWWAEALVDYIG 468
           +V  V   +G  +  +  +L W +E++NGT T  G+      +  + A +++  L++ IG
Sbjct: 121 SVLFVAWFMGFGYGFVFTFLYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIG 180

Query: 469 HSNVFILAFTFYGLRYTGLASSNEYSLVAVCEILEVFTLSLVWVTAILYFRHLIPRKYTT 528
           H  V  +       RY  ++       V   E+L+  T + +W   I Y    +P +  T
Sbjct: 181 HIRVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRT 240

Query: 529 TGQALPVIAHFCLGRCIGAIISGMVSLQLQSARVTYEALGVVSLLVAAIYLTLYHL 584
           + Q +    H  LGR  GA+I G V +    A  T+  +G+  L++  ++  +  L
Sbjct: 241 SAQGILQGLHLGLGRGCGAMIGG-VLVNYFGAAATFRGIGMACLVILLLFALIQWL 295


>AC093388-1|AAY24173.1|  463|Homo sapiens unknown protein.
          Length = 463

 Score = 73.3 bits (172), Expect = 2e-12
 Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 1/176 (0%)

Query: 409 AVFVVVALLGILWSGIDAYLPWTVEEMNGTYTEVGLTLTAGALPAVPALWWAEALVDYIG 468
           +V  V   +G  +  +  +L W +E++NGT T  G+      +  + A +++  L++ IG
Sbjct: 121 SVLFVAWFMGFGYGFVFTFLYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIG 180

Query: 469 HSNVFILAFTFYGLRYTGLASSNEYSLVAVCEILEVFTLSLVWVTAILYFRHLIPRKYTT 528
           H  V  +       RY  ++       V   E+L+  T + +W   I Y    +P +  T
Sbjct: 181 HIRVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRT 240

Query: 529 TGQALPVIAHFCLGRCIGAIISGMVSLQLQSARVTYEALGVVSLLVAAIYLTLYHL 584
           + Q +    H  LGR  GA+I G V +    A  T+  +G+  L++  ++  +  L
Sbjct: 241 SAQGILQGLHLGLGRGCGAMIGG-VLVNYFGAAATFRGIGMACLVILLLFALIQWL 295


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.324    0.138    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,179,637
Number of Sequences: 224733
Number of extensions: 4069630
Number of successful extensions: 8578
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8574
Number of HSP's gapped (non-prelim): 4
length of query: 633
length of database: 73,234,838
effective HSP length: 95
effective length of query: 538
effective length of database: 51,885,203
effective search space: 27914239214
effective search space used: 27914239214
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 68 (31.5 bits)