GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001189-TA|BGIBMGA001189-PA|undefined
         (109 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F1DAC2 Cluster: PREDICTED: hypothetical protein,...    33   1.1  
UniRef50_Q2QUY0 Cluster: Retrotransposon, putative, centromere-s...    32   1.9  
UniRef50_Q4USR5 Cluster: Putative uncharacterized protein; n=6; ...    31   3.3  
UniRef50_A6QYH5 Cluster: Predicted protein; n=1; Ajellomyces cap...    31   3.3  
UniRef50_Q4T9E1 Cluster: Chromosome undetermined SCAF7591, whole...    31   5.8  
UniRef50_Q7S7F9 Cluster: Predicted protein; n=3; Neurospora cras...    31   5.8  
UniRef50_UPI0000D56104 Cluster: PREDICTED: similar to Fork head ...    30   7.7  
UniRef50_A6RS81 Cluster: Predicted protein; n=1; Botryotinia fuc...    30   7.7  

>UniRef50_UPI0000F1DAC2 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Danio rerio|Rep: PREDICTED: hypothetical
           protein, partial - Danio rerio
          Length = 413

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 11  QGARYNFDAVRPAPICGDANQPGQCHNVHISTN 43
           Q   YN+ A+ PAP+   A  P  C N+ +ST+
Sbjct: 68  QQQHYNYQAILPAPLKRVAESPNSCPNITLSTS 100


>UniRef50_Q2QUY0 Cluster: Retrotransposon, putative,
           centromere-specific; n=2; Oryza sativa (japonica
           cultivar-group)|Rep: Retrotransposon, putative,
           centromere-specific - Oryza sativa subsp. japonica
           (Rice)
          Length = 511

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 25  ICGDANQPGQCHNVHISTNFYYGFHEVKTSGINHMA-TDCEMQEVPIEKN-VNTLVTTAR 82
           + G+ +  G+ +NV +      GF   K  G NHMA   C   +V I+K+  NTL   A 
Sbjct: 342 VIGNYDSKGE-YNVGLQEGECCGFSTTKILGSNHMAIKKCSSPDVVIDKDKFNTLHDKAL 400

Query: 83  KRSADNSGY 91
             SA ++G+
Sbjct: 401 AISARSTGF 409


>UniRef50_Q4USR5 Cluster: Putative uncharacterized protein; n=6;
           Xanthomonas|Rep: Putative uncharacterized protein -
           Xanthomonas campestris pv. campestris (strain 8004)
          Length = 351

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 8/101 (7%)

Query: 8   SCLQGARYNFDAVRPAPICGDANQPGQCHNVHISTNFYYGF-------HEVKTSGINHMA 60
           SC  G      A    P    AN P +C N +++T+  +G        +  +TS ++   
Sbjct: 200 SCTAGGSGAKTASNAFPFTASANVPARC-NTYVTTDLDFGTIAGSITSNIDRTSTVSLSC 258

Query: 61  TDCEMQEVPIEKNVNTLVTTARKRSADNSGYPQSKRFREGS 101
           T+     + +   VN   +T R R A +S Y   + +R+ +
Sbjct: 259 TNRTAWNIGLGNGVNASGSTRRMRQASSSNYITYELYRDAA 299


>UniRef50_A6QYH5 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 199

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 3   ANTIESCLQGARYNFDAVRPAPICGDANQPGQCHNVHISTNFYYGFHEVKTSGINHMATD 62
           ++TI S +  A  N +  R  P C D++  G   +   S NF  GFH++  S I  ++T 
Sbjct: 61  SSTIGSTIPPATLNTNKRRLEPDCADSDSEGD--DDEYSNNFPRGFHQMWKSKIPVVSTP 118

Query: 63  CEMQEVPI 70
                 PI
Sbjct: 119 ANSPSRPI 126


>UniRef50_Q4T9E1 Cluster: Chromosome undetermined SCAF7591, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF7591,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 338

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/49 (24%), Positives = 22/49 (44%)

Query: 52  KTSGINHMATDCEMQEVPIEKNVNTLVTTARKRSADNSGYPQSKRFREG 100
           + S  NH   +C  ++V + +N+  L+ T  +     +      R REG
Sbjct: 98  RLSAANHTLEECRQEQVVLNRNITVLLETLEEFRQSEANLTAQLRLREG 146


>UniRef50_Q7S7F9 Cluster: Predicted protein; n=3; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 511

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 13/43 (30%), Positives = 25/43 (58%)

Query: 56  INHMATDCEMQEVPIEKNVNTLVTTARKRSADNSGYPQSKRFR 98
           I+++ T C+    PI+ ++N L  T  +    ++G+PQ + FR
Sbjct: 298 IDYLFTTCDELGSPIQGSLNDLTVTTAESGIASAGWPQLEVFR 340


>UniRef50_UPI0000D56104 Cluster: PREDICTED: similar to Fork head
           domain protein FD4; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to Fork head domain protein FD4 -
           Tribolium castaneum
          Length = 326

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 13  ARYNFDAVRPAPICGDANQPGQCHNVHISTNFYYGFHEVKTSGINHMATDCEMQEVPIEK 72
           A+     +RP PI  +A  P  CH V +   + +    ++        T+ E     ++K
Sbjct: 240 AKTGTGVIRPLPIMPNALYPATCHTVPVPVQYSFCMPNMRNL---EFETEHECDRTIMDK 296

Query: 73  NVNTLVTTARKRSADN 88
           N++     A+    DN
Sbjct: 297 NISLNYLIAQNGQEDN 312


>UniRef50_A6RS81 Cluster: Predicted protein; n=1; Botryotinia
           fuckeliana B05.10|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 1164

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 70  IEKNVNTLVTTARKRSADNSGY--PQSKRFRE 99
           IE+  N     + KR ADN GY  P +KRFR+
Sbjct: 703 IEEEQNAYEAKSLKRQADNDGYFPPDAKRFRK 734


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.319    0.133    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,962,164
Number of Sequences: 1657284
Number of extensions: 4433993
Number of successful extensions: 7975
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 7971
Number of HSP's gapped (non-prelim): 9
length of query: 109
length of database: 575,637,011
effective HSP length: 86
effective length of query: 23
effective length of database: 433,110,587
effective search space: 9961543501
effective search space used: 9961543501
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)