GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001189-TA|BGIBMGA001189-PA|undefined
         (109 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   2.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   6.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   6.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    19   8.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    19   8.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    19   8.6  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 11/31 (35%), Positives = 13/31 (41%)

Query: 19  AVRPAPICGDANQPGQCHNVHISTNFYYGFH 49
           AV   PI    + PG   NV +     Y FH
Sbjct: 177 AVSAIPIDDAYDIPGMSENVDVINLMTYDFH 207


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory
          receptor candidate 5 protein.
          Length = 522

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 6/12 (50%), Positives = 11/12 (91%)

Query: 73 NVNTLVTTARKR 84
          N++T++TT RK+
Sbjct: 78 NISTILTTVRKQ 89


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 11/45 (24%), Positives = 18/45 (40%)

Query: 50  EVKTSGINHMATDCEMQEVPIEKNVNTLVTTARKRSADNSGYPQS 94
           E K  G+N      + Q +  +  + +   T    S+ NS  P S
Sbjct: 399 EAKHCGVNVPVPPMQSQIINPQPQITSPSNTNTSTSSTNSNKPNS 443


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory
          receptor candidate 62 protein.
          Length = 320

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)

Query: 73 NVNTLVTTARKRS 85
          NV+T++TT  KR+
Sbjct: 72 NVHTILTTITKRN 84


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory
          receptor candidate 37 protein.
          Length = 331

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)

Query: 73 NVNTLVTTARKRS 85
          NV+T++TT  KR+
Sbjct: 72 NVHTILTTITKRN 84


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)

Query: 73  NVNTLVTTARKRS 85
           NV+T++TT  KR+
Sbjct: 392 NVHTILTTITKRN 404


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.133    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,051
Number of Sequences: 317
Number of extensions: 1070
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 109
length of database: 114,650
effective HSP length: 49
effective length of query: 60
effective length of database: 99,117
effective search space:  5947020
effective search space used:  5947020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.4 bits)
S2: 38 (19.4 bits)