Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001189-TA|BGIBMGA001189-PA|undefined
(109 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0977 + 23227081-23228004,23228244-23228315,23229788-232298... 29 0.80
03_01_0166 + 1362254-1363138,1363225-1363545 28 1.4
01_01_1082 - 8516525-8517409 28 1.4
06_03_0271 - 19041491-19042069 27 2.4
05_04_0117 + 18136189-18137073,18137160-18137516 27 2.4
12_02_0278 - 16693580-16693591,16693592-16694476 27 3.2
12_01_0977 - 9900073-9900521,9900594-9900698,9900770-9900959,990... 27 3.2
10_08_0231 - 16045293-16045309,16045377-16045677,16045764-16046648 27 3.2
10_05_0111 + 9257161-9257931 27 3.2
09_03_0200 + 13452247-13453170 27 3.2
08_02_0397 + 16664990-16665874,16665961-16666005 27 3.2
08_01_0761 - 7296069-7296169,7296516-7296703,7297016-7297026,729... 27 3.2
07_01_1077 - 9687394-9687515,9696615-9696733,9696815-9697104,969... 27 3.2
06_03_0573 + 22407489-22408373,22408460-22408795 27 3.2
06_03_0121 + 16864735-16865619,16865706-16866026 27 3.2
04_04_1671 + 35231546-35232430,35232517-35232837 27 3.2
04_03_0155 - 11960973-11961896 27 3.2
04_01_0451 + 5845249-5846133,5846220-5846509,5855590-5856060,585... 27 3.2
08_02_1029 - 23768228-23768548,23768635-23769519 27 4.3
11_06_0642 + 25755000-25755896 26 7.4
10_08_1022 + 22337332-22339398 26 7.4
08_01_0831 + 8086470-8087354,8087441-8087730,8096373-8096412,809... 26 7.4
07_03_0423 + 18035688-18036572,18036659-18036978,18052618-180527... 26 7.4
04_04_0719 + 27541129-27541520,27541607-27541965,27542061-275421... 26 7.4
08_02_0542 + 18374810-18375694,18375781-18376098 25 9.8
07_01_1151 - 10822616-10823863 25 9.8
05_03_0148 + 8922959-8923855 25 9.8
04_04_0957 - 29670097-29670135,29670136-29671020 25 9.8
04_01_0291 + 3848091-3848975,3849062-3849351,3858003-3858339 25 9.8
03_03_0153 - 14910420-14910769,14910946-14911008,14911084-149113... 25 9.8
01_01_0649 - 4939939-4940835 25 9.8
>08_02_0977 +
23227081-23228004,23228244-23228315,23229788-23229841,
23231763-23231840,23233080-23233173,23233352-23233423,
23233537-23233584,23233608-23233777,23234016-23234088,
23234850-23235199
Length = 644
Score = 29.1 bits (62), Expect = 0.80
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 51 VKTSGINHMATDCEMQEVPIEKNVNTLVTTARKRSADNSGYPQSKRFREGSLQI 104
V G+++ AT C + EK + TL+ + A N+ Y Q KR +L +
Sbjct: 355 VGRDGVHYSATKCTKYTISTEKVMITLIHGKQVLEAVNNPYGQKKRCLRRTLTV 408
>03_01_0166 + 1362254-1363138,1363225-1363545
Length = 401
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTSGINH 58
P CG+A H V + ++F+YG + TS H
Sbjct: 41 PACGEAFPSPDTHEVVVFSHFFYGGFALPTSKFFH 75
>01_01_1082 - 8516525-8517409
Length = 294
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 40 PACGEAFPTSDMHEVVVFSHFFYGGFSLPTS 70
>06_03_0271 - 19041491-19042069
Length = 192
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 17 PACGEAFPTPDTHEVVVFSHFFYGGFSLPTS 47
>05_04_0117 + 18136189-18137073,18137160-18137516
Length = 413
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPSPDTHEVAVFSHFFYGGFALPTS 71
>12_02_0278 - 16693580-16693591,16693592-16694476
Length = 298
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPSPDTHEVVVFSHFFYGGFALPTS 71
>12_01_0977 -
9900073-9900521,9900594-9900698,9900770-9900959,
9901035-9901093,9901297-9901688,9901770-9902059,
9902146-9903030
Length = 789
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPTPDTHEVVVFSHFFYGGFALPTS 71
>10_08_0231 -
16045293-16045309,16045377-16045677,16045764-16046648
Length = 400
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPSPDTHEVVVFSHFFYGGFALPTS 71
>10_05_0111 + 9257161-9257931
Length = 256
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPTPDTHEVVVFSHFFYGGFALPTS 71
>09_03_0200 + 13452247-13453170
Length = 307
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPTPDTHEVVVFSHFFYGGFALPTS 71
>08_02_0397 + 16664990-16665874,16665961-16666005
Length = 309
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPTPDTHEVVVFSHFFYGGFALPTS 71
>08_01_0761 -
7296069-7296169,7296516-7296703,7297016-7297026,
7297521-7297811,7298623-7298665,7309343-7309632,
7309719-7310603
Length = 602
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPSPDTHEVVVFSHFFYGGFALPTS 71
>07_01_1077 -
9687394-9687515,9696615-9696733,9696815-9697104,
9697191-9698075
Length = 471
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPSPDTHEVVVFSHFFYGGFALPTS 71
>06_03_0573 + 22407489-22408373,22408460-22408795
Length = 406
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPTPDTHEVVVFSHFFYGGFALPTS 71
>06_03_0121 + 16864735-16865619,16865706-16866026
Length = 401
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPSPDTHEVVVFSHFFYGGFALPTS 71
>04_04_1671 + 35231546-35232430,35232517-35232837
Length = 401
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPSPDTHEVVVFSHFFYGGFALPTS 71
>04_03_0155 - 11960973-11961896
Length = 307
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPTPDTHEVVVFSHFFYGGFALPTS 71
>04_01_0451 +
5845249-5846133,5846220-5846509,5855590-5856060,
5856898-5857063,5857100-5857498,5858031-5858075
Length = 751
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPSPDTHEVVVFSHFFYGGFALPTS 71
>08_02_1029 - 23768228-23768548,23768635-23769519
Length = 401
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG + TS
Sbjct: 41 PACGEAFPSPDTHEVVVFSHFFYGGFALLTS 71
>11_06_0642 + 25755000-25755896
Length = 298
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H + ++F+YG + TS
Sbjct: 41 PACGEAFPTPDTHEAVVFSHFFYGSFALPTS 71
>10_08_1022 + 22337332-22339398
Length = 688
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 5 TIESCLQGARYNFDAVRPAPICGDANQPGQCHNVHI 40
T++S ++ + DA PAP G + +CH V I
Sbjct: 571 TLQSQMESLKKERDARPPAPSGGGGDGGARCHAVEI 606
>08_01_0831 +
8086470-8087354,8087441-8087730,8096373-8096412,
8096878-8096957,8099643-8099733,8099989-8100052,
8100553-8100818
Length = 571
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + ++F+YG TS
Sbjct: 41 PACGEAFPTPDTHEVVVFSHFFYGGFAPPTS 71
>07_03_0423 +
18035688-18036572,18036659-18036978,18052618-18052724,
18053001-18053104,18054129-18054328,18054422-18054522,
18054695-18054841,18055007-18055166,18055287-18055368,
18056070-18056336,18056846-18056973,18057513-18057672
Length = 886
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H V + + F+YG + TS
Sbjct: 41 PACGEAFPSPDTHEVVVFSYFFYGGFALPTS 71
>04_04_0719 +
27541129-27541520,27541607-27541965,27542061-27542189,
27542278-27542409,27542522-27542794,27542899-27543299,
27543424-27543567
Length = 609
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 87 DNSGYPQSKRFREGSLQIHY 106
D GY +S RFR G IHY
Sbjct: 109 DGHGYLRSFRFRPGDRTIHY 128
>08_02_0542 + 18374810-18375694,18375781-18376098
Length = 400
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H + ++F+YG + TS
Sbjct: 41 PACGEAFPTPDTHEAVVFSHFFYGGFALPTS 71
>07_01_1151 - 10822616-10823863
Length = 415
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+ H V + ++F+YG + TS
Sbjct: 17 PACGEMFPTPDTHKVVVFSHFFYGGFSLPTS 47
>05_03_0148 + 8922959-8923855
Length = 298
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H + ++F+YG + TS
Sbjct: 41 PACGEAFPTPDTHETVVFSHFFYGGFALPTS 71
>04_04_0957 - 29670097-29670135,29670136-29671020
Length = 307
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H + ++F+YG + TS
Sbjct: 41 PACGEAFPTPDIHEAVVFSHFFYGGFALPTS 71
>04_01_0291 + 3848091-3848975,3849062-3849351,3858003-3858339
Length = 503
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H + ++F+YG + TS
Sbjct: 41 PACGEAFPTPDTHEAVVFSHFFYGGFALPTS 71
>03_03_0153 -
14910420-14910769,14910946-14911008,14911084-14911339,
14911432-14911522,14911798-14912096,14912177-14912295,
14922536-14922594,14922676-14922965,14923052-14923567,
14923634-14923936
Length = 781
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H + ++F+YG + TS
Sbjct: 41 PACGEAFPTPDTHEAVVFSHFFYGGFALPTS 71
>01_01_0649 - 4939939-4940835
Length = 298
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 24 PICGDANQPGQCHNVHISTNFYYGFHEVKTS 54
P CG+A H + ++F+YG + TS
Sbjct: 41 PACGEAFPTPDTHETVVFSHFFYGGFALPTS 71
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.133 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,231,257
Number of Sequences: 37544
Number of extensions: 116050
Number of successful extensions: 232
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 201
Number of HSP's gapped (non-prelim): 31
length of query: 109
length of database: 14,793,348
effective HSP length: 72
effective length of query: 37
effective length of database: 12,090,180
effective search space: 447336660
effective search space used: 447336660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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