GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001189-TA|BGIBMGA001189-PA|undefined
         (109 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           22   5.7  
AY745208-1|AAU93475.1|  103|Anopheles gambiae cytochrome P450 pr...    22   5.7  
EF519490-1|ABP68539.1|  176|Anopheles gambiae ENSANGG00000019219...    21   7.5  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    21   10.0 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            21   10.0 

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 55  GINHMATDCEMQEVPIEKNVNTLVTTARKRS 85
           GI  MA  CE  ++   ++    VT A KRS
Sbjct: 193 GITAMAWSCEKFKMEEGEDTEPGVTNASKRS 223


>AY745208-1|AAU93475.1|  103|Anopheles gambiae cytochrome P450
          protein.
          Length = 103

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 48 FHEVKTSGINHMATDCEMQEVPIEKNVNTLV 78
          FH V  SG      DC +    + K+   L+
Sbjct: 10 FHIVPVSGPRRTLADCSLGGYRVPKDTTVLI 40


>EF519490-1|ABP68539.1|  176|Anopheles gambiae
           ENSANGG00000019219-like protein.
          Length = 176

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 10  LQGARYNFDAVRPAPICGDANQPGQ 34
           + G  Y  D ++  PI   A  PGQ
Sbjct: 144 VDGRLYELDGLKEGPIDHGAXGPGQ 168


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 21.0 bits (42), Expect = 10.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 72   KNVNTLVTTARKRSADNSGYP 92
            +N N    TAR+R    +G P
Sbjct: 1111 RNANRRAATARRREERRAGLP 1131


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.0 bits (42), Expect = 10.0
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 36   HNVHISTNFYYGFHEVKTSGINHMATDCEMQEVPIEKN 73
            H+  I   +++G  E+K + + H     E++ +   K+
Sbjct: 2286 HDQLIKAKYFHGLEELKLAPLTHHTFHKEIKGIDEAKS 2323


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.133    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,936
Number of Sequences: 2123
Number of extensions: 4610
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 5
length of query: 109
length of database: 516,269
effective HSP length: 56
effective length of query: 53
effective length of database: 397,381
effective search space: 21061193
effective search space used: 21061193
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)