GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001189-TA|BGIBMGA001189-PA|undefined
         (109 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060713-1|AAL28261.1|  596|Drosophila melanogaster GH15479p pro...    26   8.9  
AE014296-3503|AAF51694.1|  596|Drosophila melanogaster CG9389-PA...    26   8.9  

>AY060713-1|AAL28261.1|  596|Drosophila melanogaster GH15479p
           protein.
          Length = 596

 Score = 26.2 bits (55), Expect = 8.9
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 32  PGQCHNVHISTNFYYGFHEVKTSGINHMATDCEMQEVPIEKNVNTLVT 79
           P Q     + T F     EVK +G   +A + + QE   +K+ N +VT
Sbjct: 268 PDQFSASDLDTLFLLACREVKKAGAIALAENKKNQEYTTKKHTNDIVT 315


>AE014296-3503|AAF51694.1|  596|Drosophila melanogaster CG9389-PA
           protein.
          Length = 596

 Score = 26.2 bits (55), Expect = 8.9
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 32  PGQCHNVHISTNFYYGFHEVKTSGINHMATDCEMQEVPIEKNVNTLVT 79
           P Q     + T F     EVK +G   +A + + QE   +K+ N +VT
Sbjct: 268 PDQFSASDLDTLFLLACREVKKAGAIALAENKKNQEYTTKKHTNDIVT 315


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.133    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,667,689
Number of Sequences: 52641
Number of extensions: 218679
Number of successful extensions: 483
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 481
Number of HSP's gapped (non-prelim): 2
length of query: 109
length of database: 24,830,863
effective HSP length: 75
effective length of query: 34
effective length of database: 20,882,788
effective search space: 710014792
effective search space used: 710014792
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)