Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001189-TA|BGIBMGA001189-PA|undefined
(109 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 0.92
Z82055-1|CAB04843.1| 405|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 27 3.7
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 26 4.9
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 26 4.9
U55364-1|AAA97970.2| 226|Caenorhabditis elegans Hypothetical pr... 26 6.5
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr... 25 8.6
AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective spe... 25 8.6
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.7 bits (61), Expect = 0.92
Identities = 15/58 (25%), Positives = 31/58 (53%)
Query: 37 NVHISTNFYYGFHEVKTSGINHMATDCEMQEVPIEKNVNTLVTTARKRSADNSGYPQS 94
NV IS + V G +++ ++ ++P +KNVN+++T+ +D + PQ+
Sbjct: 127 NVQISALRQGSDNSVVAIGNGAISSTSDLGQMPTDKNVNSVITSDNTTYSDVTTAPQA 184
>Z82055-1|CAB04843.1| 405|Caenorhabditis elegans Hypothetical
protein T26H2.1 protein.
Length = 405
Score = 27.5 bits (58), Expect = 2.1
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 37 NVHISTNFYYGFHEVKTSGINHMATDCEMQEVPIEKNVNTLVTTARKRSADNSGYPQSK 95
++ IS NF F I+ + + C+ VP++ + V T+ + AD+ G SK
Sbjct: 80 HITISMNFDNSFQVYFYLNIDALESTCQNSIVPLKLGIPNRVETSFDKIADDYGTAYSK 138
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
protein H19N07.2c protein.
Length = 1135
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 12 GARYNFDAVRPAPICGDANQPGQCHNVHISTNFYYGFHEVKTSGINHMATDCEMQEVPIE 71
GA Y +D+ R G NQ C+ I +FY+ T+G + ++ P E
Sbjct: 179 GANYMWDSKRHTGCIGLRNQGATCYMNSILQSFYF------TTGFRRAVYNMDVGTEPNE 232
Query: 72 KNV 74
N+
Sbjct: 233 SNI 235
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
protein H19N07.2b protein.
Length = 1130
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 12 GARYNFDAVRPAPICGDANQPGQCHNVHISTNFYYGFHEVKTSGINHMATDCEMQEVPIE 71
GA Y +D+ R G NQ C+ I +FY+ T+G + ++ P E
Sbjct: 179 GANYMWDSKRHTGCIGLRNQGATCYMNSILQSFYF------TTGFRRAVYNMDVGTEPNE 232
Query: 72 KNV 74
N+
Sbjct: 233 SNI 235
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
protein H19N07.2a protein.
Length = 1133
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 12 GARYNFDAVRPAPICGDANQPGQCHNVHISTNFYYGFHEVKTSGINHMATDCEMQEVPIE 71
GA Y +D+ R G NQ C+ I +FY+ T+G + ++ P E
Sbjct: 179 GANYMWDSKRHTGCIGLRNQGATCYMNSILQSFYF------TTGFRRAVYNMDVGTEPNE 232
Query: 72 KNV 74
N+
Sbjct: 233 SNI 235
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 7 ESCLQGARYNFDAVRPAPICGDANQP 32
ESC N +A PAPI GD ++P
Sbjct: 191 ESCSSSRPENLNASIPAPIPGDDSRP 216
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 7 ESCLQGARYNFDAVRPAPICGDANQP 32
ESC N +A PAPI GD ++P
Sbjct: 191 ESCSSSRPENLNASIPAPIPGDDSRP 216
>U55364-1|AAA97970.2| 226|Caenorhabditis elegans Hypothetical
protein F21C10.10 protein.
Length = 226
Score = 25.8 bits (54), Expect = 6.5
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 19 AVRPAPICGDANQPGQCHNVHISTNFYYGFHEVKTSGINHMATDCEMQEVPIEKNVNTLV 78
AV A I + H+ H+S Y HE KT+ M T+ ++ + +E+ VN L+
Sbjct: 112 AVPNATIISLNGEKSPIHSNHVSVKMYSPIHETKTA---KMFTNSKVSKKTLEE-VNQLL 167
>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical protein
F16B12.6 protein.
Length = 1392
Score = 25.4 bits (53), Expect = 8.6
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 17 FDAVRPAPICGDANQPGQCHNVHISTNFYYGFHEVKTSGINHMATDCEMQE 67
F ++ AP+ A Q H +HIS N + + SG +H D + E
Sbjct: 1153 FHLLKTAPVNETAKIIHQEHGIHISPNMLFSLKRRELSG-SHADNDTFVTE 1202
>AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective
spermatogenesis protein 8 protein.
Length = 512
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/12 (75%), Positives = 11/12 (91%)
Query: 47 GFHEVKTSGINH 58
GFHE++TSGI H
Sbjct: 480 GFHEIETSGILH 491
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.133 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,869,262
Number of Sequences: 27539
Number of extensions: 110165
Number of successful extensions: 240
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 233
Number of HSP's gapped (non-prelim): 12
length of query: 109
length of database: 12,573,161
effective HSP length: 72
effective length of query: 37
effective length of database: 10,590,353
effective search space: 391843061
effective search space used: 391843061
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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