GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001188-TA|BGIBMGA001188-PA|IPR001247|Exoribonuclease,
IPR012462|Protein of unknown function DUF1671
         (805 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    26   3.4  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    26   4.5  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    26   4.5  

>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 26.2 bits (55), Expect = 3.4
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 448 LTGTST---EATVGELVDSMSPEQPSKKKKYNINNAEILPVSLILKVTK 493
           LTGT+T   +   G +VD+ + +Q  K+K+ +     +L V L+  +T+
Sbjct: 285 LTGTATGLKQIVDGRVVDAKAGKQTDKEKQTDRTTRMLLAVLLLFLITE 333


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 25.8 bits (54), Expect = 4.5
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 6/80 (7%)

Query: 700 LGVQSRIIFANTGTELQSYAPELVHHFQTHGSPIMIGGGVLAHTILGIEYNSITNETRYL 759
           LG+  R ++    + L + +  + H  + +G P+++      H   G +       T  L
Sbjct: 383 LGLLERTLWLQHLSGLLAASMVVCHAIERNGRPVLV------HCSDGWDRTPQIVATAQL 436

Query: 760 ILDPHYTGAEDITTVINKGW 779
            LDP+Y   E    ++ + W
Sbjct: 437 CLDPYYRTIEGFRVLVEREW 456


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 25.8 bits (54), Expect = 4.5
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 6/80 (7%)

Query: 700 LGVQSRIIFANTGTELQSYAPELVHHFQTHGSPIMIGGGVLAHTILGIEYNSITNETRYL 759
           LG+  R ++    + L + +  + H  + +G P+++      H   G +       T  L
Sbjct: 383 LGLLERTLWLQHLSGLLAASMVVCHAIERNGRPVLV------HCSDGWDRTPQIVATAQL 436

Query: 760 ILDPHYTGAEDITTVINKGW 779
            LDP+Y   E    ++ + W
Sbjct: 437 CLDPYYRTIEGFRVLVEREW 456


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.135    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 828,424
Number of Sequences: 2123
Number of extensions: 34333
Number of successful extensions: 54
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 54
Number of HSP's gapped (non-prelim): 3
length of query: 805
length of database: 516,269
effective HSP length: 70
effective length of query: 735
effective length of database: 367,659
effective search space: 270229365
effective search space used: 270229365
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)