Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001188-TA|BGIBMGA001188-PA|IPR001247|Exoribonuclease,
IPR012462|Protein of unknown function DUF1671
(805 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70854-2|AAO91721.1| 575|Caenorhabditis elegans Hypothetical pr... 269 5e-72
U70854-1|AAB09146.1| 589|Caenorhabditis elegans Hypothetical pr... 269 5e-72
U00033-15|AAC48298.2| 434|Caenorhabditis elegans Hypothetical p... 97 3e-20
Z92838-10|CAB07412.2| 312|Caenorhabditis elegans Hypothetical p... 50 5e-06
Z92832-9|CAB07377.2| 312|Caenorhabditis elegans Hypothetical pr... 50 5e-06
U39999-1|AAK93855.1| 277|Caenorhabditis elegans Hypothetical pr... 39 0.012
Z81096-8|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 36 0.15
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 36 0.15
Z73422-8|CAA97771.3| 240|Caenorhabditis elegans Hypothetical pr... 32 1.4
Z68320-5|CAA92705.4| 448|Caenorhabditis elegans Hypothetical pr... 31 3.2
AL008881-4|CAH10844.2| 448|Caenorhabditis elegans Hypothetical ... 31 3.2
Z81581-15|CAI46620.1| 656|Caenorhabditis elegans Hypothetical p... 30 5.6
Z81581-14|CAI46619.1| 729|Caenorhabditis elegans Hypothetical p... 30 5.6
Z81143-11|CAI46592.1| 656|Caenorhabditis elegans Hypothetical p... 30 5.6
Z81143-10|CAB03514.2| 729|Caenorhabditis elegans Hypothetical p... 30 5.6
DQ372920-1|ABD16184.1| 729|Caenorhabditis elegans Krev interact... 30 5.6
AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical ... 30 5.6
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 30 5.6
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 30 7.5
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 30 7.5
Z78062-2|CAB01499.2| 689|Caenorhabditis elegans Hypothetical pr... 30 7.5
Z75553-6|CAA99951.1| 534|Caenorhabditis elegans Hypothetical pr... 30 7.5
Z75529-9|CAA99789.1| 534|Caenorhabditis elegans Hypothetical pr... 30 7.5
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 30 7.5
>U70854-2|AAO91721.1| 575|Caenorhabditis elegans Hypothetical
protein F38A5.1b protein.
Length = 575
Score = 269 bits (660), Expect = 5e-72
Identities = 123/242 (50%), Positives = 158/242 (65%), Gaps = 9/242 (3%)
Query: 566 RRTLHEQLGLPLHRPVFRRGNAF-IDKSGGYLVN------PHEAMPIQASKSDVTVALVR 618
R LH+ LP +PV R A + L N PH ++ ++T V
Sbjct: 330 RIRLHKLFNLPSSKPVLRLSQALALHSESARLTNKKLIREPHLSITNYQPVGEITT--VN 387
Query: 619 GRYAYHHYMQDNFNDDGWGCAYRSMQTIFSWFRYQGYTDVEVPTHKEIQQCLVKIGDKQS 678
G Y YHHYMQD +D GWGCAYRS QTI+SWF GYTD VP+H+EIQQ LV I DKQ+
Sbjct: 388 GPYNYHHYMQDGIDDSGWGCAYRSFQTIWSWFILNGYTDKPVPSHREIQQALVDIQDKQA 447
Query: 679 TFIGSKQWIGSTEVMFCLETLLGVQSRIIFANTGTELQSYAPELVHHFQTHGSPIMIGGG 738
F+GS+QWIGSTE+ F L LL ++ R I N+G E+ EL HF+T G+P+MIGG
Sbjct: 448 KFVGSRQWIGSTEISFVLNELLKLECRFIATNSGAEVVERVRELARHFETSGTPVMIGGN 507
Query: 739 VLAHTILGIEYNSITNETRYLILDPHYTGAEDITTVINKGWCGWKSSDFWNKTAHYNLCL 798
+LAHTILG+++N T ET++L+LDPHYTG+EDI T+ +KGWC WK + FW+K YN+ L
Sbjct: 508 MLAHTILGVDFNDTTGETKFLVLDPHYTGSEDIKTITSKGWCAWKPASFWSKDHFYNMVL 567
Query: 799 PQ 800
PQ
Sbjct: 568 PQ 569
>U70854-1|AAB09146.1| 589|Caenorhabditis elegans Hypothetical
protein F38A5.1a protein.
Length = 589
Score = 269 bits (660), Expect = 5e-72
Identities = 123/242 (50%), Positives = 158/242 (65%), Gaps = 9/242 (3%)
Query: 566 RRTLHEQLGLPLHRPVFRRGNAF-IDKSGGYLVN------PHEAMPIQASKSDVTVALVR 618
R LH+ LP +PV R A + L N PH ++ ++T V
Sbjct: 344 RIRLHKLFNLPSSKPVLRLSQALALHSESARLTNKKLIREPHLSITNYQPVGEITT--VN 401
Query: 619 GRYAYHHYMQDNFNDDGWGCAYRSMQTIFSWFRYQGYTDVEVPTHKEIQQCLVKIGDKQS 678
G Y YHHYMQD +D GWGCAYRS QTI+SWF GYTD VP+H+EIQQ LV I DKQ+
Sbjct: 402 GPYNYHHYMQDGIDDSGWGCAYRSFQTIWSWFILNGYTDKPVPSHREIQQALVDIQDKQA 461
Query: 679 TFIGSKQWIGSTEVMFCLETLLGVQSRIIFANTGTELQSYAPELVHHFQTHGSPIMIGGG 738
F+GS+QWIGSTE+ F L LL ++ R I N+G E+ EL HF+T G+P+MIGG
Sbjct: 462 KFVGSRQWIGSTEISFVLNELLKLECRFIATNSGAEVVERVRELARHFETSGTPVMIGGN 521
Query: 739 VLAHTILGIEYNSITNETRYLILDPHYTGAEDITTVINKGWCGWKSSDFWNKTAHYNLCL 798
+LAHTILG+++N T ET++L+LDPHYTG+EDI T+ +KGWC WK + FW+K YN+ L
Sbjct: 522 MLAHTILGVDFNDTTGETKFLVLDPHYTGSEDIKTITSKGWCAWKPASFWSKDHFYNMVL 581
Query: 799 PQ 800
PQ
Sbjct: 582 PQ 583
>U00033-15|AAC48298.2| 434|Caenorhabditis elegans Hypothetical
protein F37C12.13a protein.
Length = 434
Score = 97.5 bits (232), Expect = 3e-20
Identities = 67/260 (25%), Positives = 128/260 (49%), Gaps = 11/260 (4%)
Query: 18 ISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTTVVCGIKLELAVPKAEEPDLG 77
+ I R D R+ +E R++KL V + +A+ GNT V+ + E+A P + P G
Sbjct: 18 LKIGKRFDFRSLEEFRDVKLVVGA---EVGTAICTIGNTKVMAAVSAEIAEPSSMRPHKG 74
Query: 78 FLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCIVPDKLAWVVYC 137
+ +V+L + + + ++ II++S+CID++ LCI K W +
Sbjct: 75 VINIDVDLSPMANYANEHDRLGSKGMELIRLLELIIRDSRCIDVEALCIRAGKEIWKIRV 134
Query: 138 DMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIKVETNER-INLKIHGLPVAT 196
D+ +D DGSL+D +A I + + P+V + I E + + L I+ +P+ T
Sbjct: 135 DVRILDEDGSLLDCACLAAITALQHFRRPNVTLEPHHTLIYSEYEKAPVPLNIYHMPICT 194
Query: 197 SFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIISYNKGL-LCGIQKLGGGSLSTENNE 255
+ + + + QI+++ DPT+ E G +++++ NK +C + + LST+ E
Sbjct: 195 TIGLLD--KGQIVVI-DPTDKETACLDG---SIVVACNKRREVCALHQSTNLILSTKQIE 248
Query: 256 EAIRLAEQHTIAVEKRLSKI 275
++LA A+ +S +
Sbjct: 249 RCVKLAMARAEALTAVVSDV 268
>Z92838-10|CAB07412.2| 312|Caenorhabditis elegans Hypothetical
protein F31D4.1 protein.
Length = 312
Score = 50.4 bits (115), Expect = 5e-06
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 23 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTT-VVCGIKLELAVPKAE---EPDLGF 78
R DGR+ + R I L + + S V+ G TT V+ GIKLEL AE EP
Sbjct: 22 RNDGRSCQDFRQIILERGVLSGTNGSCRVQLGQTTDVLAGIKLELESYDAETEKEPKQPI 81
Query: 79 LITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCI---VPDKLAWVV 135
NV+ A SS++ +YA+ ++ SK +D+ + D W +
Sbjct: 82 NF-NVDFSANASSQFAGKGGDEYAEELSAAFQAAY--SKALDIMPNLAKTQLADGYRWKI 138
Query: 136 YCDMVCIDHDGSLVDACIIALIASFKTLLLP 166
D+ + DGS+ DA IA+I + L P
Sbjct: 139 NVDISVLQWDGSVSDAISIAIIGALSDLEFP 169
>Z92832-9|CAB07377.2| 312|Caenorhabditis elegans Hypothetical
protein F31D4.1 protein.
Length = 312
Score = 50.4 bits (115), Expect = 5e-06
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 23 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTT-VVCGIKLELAVPKAE---EPDLGF 78
R DGR+ + R I L + + S V+ G TT V+ GIKLEL AE EP
Sbjct: 22 RNDGRSCQDFRQIILERGVLSGTNGSCRVQLGQTTDVLAGIKLELESYDAETEKEPKQPI 81
Query: 79 LITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDLKDLCI---VPDKLAWVV 135
NV+ A SS++ +YA+ ++ SK +D+ + D W +
Sbjct: 82 NF-NVDFSANASSQFAGKGGDEYAEELSAAFQAAY--SKALDIMPNLAKTQLADGYRWKI 138
Query: 136 YCDMVCIDHDGSLVDACIIALIASFKTLLLP 166
D+ + DGS+ DA IA+I + L P
Sbjct: 139 NVDISVLQWDGSVSDAISIAIIGALSDLEFP 169
>U39999-1|AAK93855.1| 277|Caenorhabditis elegans Hypothetical
protein F41G3.14 protein.
Length = 277
Score = 39.1 bits (87), Expect = 0.012
Identities = 42/183 (22%), Positives = 75/183 (40%), Gaps = 9/183 (4%)
Query: 2 SEVYKLIHPVKHFNDYISIKTRLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTTVVCG 61
SEV + I P +F +I DGR + + + S+VV TV C
Sbjct: 3 SEVLRGIDPRGYFATFIKEGVYPDGRGLLDEQKLVFKQGECGGV-GSSVVSTQGVTVSCS 61
Query: 62 IKLELAVPKAEEPDLGFLITNVELPALCSSKYRPGPPSDYAQVINNIVSEIIKNSKCIDL 121
I+ +++ D + +E S K S + N +N +C+D+
Sbjct: 62 IQASVSLVS----DAPLVDIKIEGSQQLSEKDAEDCNSVLLSLFTNNCFVRRENLRCLDV 117
Query: 122 KDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYD-TETEEIKVE 180
C P L W ++ + + +G+ +DA + AL A+ LPS+ + +E +E +E
Sbjct: 118 ---CGKPLPLEWQLHIIVKVLSLEGNFLDAAVCALGAALVDAKLPSIVLNHSEGDESTIE 174
Query: 181 TNE 183
+
Sbjct: 175 KTQ 177
>Z81096-8|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 35.5 bits (78), Expect = 0.15
Identities = 62/252 (24%), Positives = 102/252 (40%), Gaps = 32/252 (12%)
Query: 170 YDTETEEIKVETNERINLKIHGLPVATSFAVYEHFQSQIILL-TDPTNYEEEMCGGN--- 225
Y + T + NE++ + I + Y H ++ I + T T Y+ E+ G +
Sbjct: 1088 YKSSTHLVNKLMNEQV-IFIDDYRWTSQLRYYWHLENVFIRVGTVSTRYDYEVQGVDCMI 1146
Query: 226 GSNLIISYNKGLLCGIQKLGGGSLSTENNEEAIRLAEQHTIAVEKRLSKIDTTESTGCLY 285
+ L+ K +C + G N + LA Q A+ K + DT + C
Sbjct: 1147 DNQLVDEAVKYFIC-MNHFGFNGFV---NGMDVNLARQIAGALGKPFAICDTEQEIDCKM 1202
Query: 286 ----GLMYDGTLLVVGFSLESFETETEKNSY-----SQLLLNFPAEIELCGVVKFGETLT 336
L++ GT+ + +LE TEK+ Y S L +F +EI L F L+
Sbjct: 1203 LIEGALLFGGTVFIEEKNLEELWKSTEKDVYTCHSLSNLKYHFESEITLNSSFMF--LLS 1260
Query: 337 TDSTTKEILQDVDITDNPLI-------IIINREKDMKAHFIVHDKFEETKYEVFSPEELW 389
+ T LQ + + N +I I +REK ++ I+ D FE F LW
Sbjct: 1261 SSFQTARSLQFGNSSYNKVIDEKLSLNSIAHREKKVQKFQIISD-FE----NYFGSRGLW 1315
Query: 390 KQFLHVRLNTVL 401
K +L + +L
Sbjct: 1316 KNYLEAMICRIL 1327
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 35.5 bits (78), Expect = 0.15
Identities = 62/252 (24%), Positives = 102/252 (40%), Gaps = 32/252 (12%)
Query: 170 YDTETEEIKVETNERINLKIHGLPVATSFAVYEHFQSQIILL-TDPTNYEEEMCGGN--- 225
Y + T + NE++ + I + Y H ++ I + T T Y+ E+ G +
Sbjct: 1088 YKSSTHLVNKLMNEQV-IFIDDYRWTSQLRYYWHLENVFIRVGTVSTRYDYEVQGVDCMI 1146
Query: 226 GSNLIISYNKGLLCGIQKLGGGSLSTENNEEAIRLAEQHTIAVEKRLSKIDTTESTGCLY 285
+ L+ K +C + G N + LA Q A+ K + DT + C
Sbjct: 1147 DNQLVDEAVKYFIC-MNHFGFNGFV---NGMDVNLARQIAGALGKPFAICDTEQEIDCKM 1202
Query: 286 ----GLMYDGTLLVVGFSLESFETETEKNSY-----SQLLLNFPAEIELCGVVKFGETLT 336
L++ GT+ + +LE TEK+ Y S L +F +EI L F L+
Sbjct: 1203 LIEGALLFGGTVFIEEKNLEELWKSTEKDVYTCHSLSNLKYHFESEITLNSSFMF--LLS 1260
Query: 337 TDSTTKEILQDVDITDNPLI-------IIINREKDMKAHFIVHDKFEETKYEVFSPEELW 389
+ T LQ + + N +I I +REK ++ I+ D FE F LW
Sbjct: 1261 SSFQTARSLQFGNSSYNKVIDEKLSLNSIAHREKKVQKFQIISD-FE----NYFGSRGLW 1315
Query: 390 KQFLHVRLNTVL 401
K +L + +L
Sbjct: 1316 KNYLEAMICRIL 1327
>Z73422-8|CAA97771.3| 240|Caenorhabditis elegans Hypothetical
protein B0564.1a protein.
Length = 240
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 23 RLDGRNFDEHRNIKLNVNSIKTADASAVVKCGNTTVVCGI 62
R+DGR + RNI + + A+ S ++ GNT V+C +
Sbjct: 10 RIDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAV 49
>Z68320-5|CAA92705.4| 448|Caenorhabditis elegans Hypothetical
protein W07A12.4 protein.
Length = 448
Score = 31.1 bits (67), Expect = 3.2
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 119 IDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIK 178
IDLK+L V W Y + SL+ +C+ A+ F+TLL + ++ + +E+
Sbjct: 147 IDLKELFSV-----WFSYATKA---YHPSLIKSCMQAIALEFETLL--TEEWEKDWQELH 196
Query: 179 VETNERINLKIHGLPVATSFAVYEHFQSQI 208
+ I LK + L VA+ F ++E Q I
Sbjct: 197 RDQMIEI-LKCNNLKVASEFKLWEALQKWI 225
>AL008881-4|CAH10844.2| 448|Caenorhabditis elegans Hypothetical
protein W07A12.4 protein.
Length = 448
Score = 31.1 bits (67), Expect = 3.2
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 119 IDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIK 178
IDLK+L V W Y + SL+ +C+ A+ F+TLL + ++ + +E+
Sbjct: 147 IDLKELFSV-----WFSYATKA---YHPSLIKSCMQAIALEFETLL--TEEWEKDWQELH 196
Query: 179 VETNERINLKIHGLPVATSFAVYEHFQSQI 208
+ I LK + L VA+ F ++E Q I
Sbjct: 197 RDQMIEI-LKCNNLKVASEFKLWEALQKWI 225
>Z81581-15|CAI46620.1| 656|Caenorhabditis elegans Hypothetical
protein ZK265.1b protein.
Length = 656
Score = 30.3 bits (65), Expect = 5.6
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 454 EATVGELVDSMSPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLVKTAVKMMTTQRK 513
EATVGE++D ++ E +++ N + S+ L++ D L D +K K TT RK
Sbjct: 448 EATVGEVLDRLAEETQLNREQMNCFALFVYSESMSLQLQPDSLIDGKLKVD-KWNTTIRK 506
>Z81581-14|CAI46619.1| 729|Caenorhabditis elegans Hypothetical
protein ZK265.1a protein.
Length = 729
Score = 30.3 bits (65), Expect = 5.6
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 454 EATVGELVDSMSPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLVKTAVKMMTTQRK 513
EATVGE++D ++ E +++ N + S+ L++ D L D +K K TT RK
Sbjct: 448 EATVGEVLDRLAEETQLNREQMNCFALFVYSESMSLQLQPDSLIDGKLKVD-KWNTTIRK 506
>Z81143-11|CAI46592.1| 656|Caenorhabditis elegans Hypothetical
protein ZK265.1b protein.
Length = 656
Score = 30.3 bits (65), Expect = 5.6
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 454 EATVGELVDSMSPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLVKTAVKMMTTQRK 513
EATVGE++D ++ E +++ N + S+ L++ D L D +K K TT RK
Sbjct: 448 EATVGEVLDRLAEETQLNREQMNCFALFVYSESMSLQLQPDSLIDGKLKVD-KWNTTIRK 506
>Z81143-10|CAB03514.2| 729|Caenorhabditis elegans Hypothetical
protein ZK265.1a protein.
Length = 729
Score = 30.3 bits (65), Expect = 5.6
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 454 EATVGELVDSMSPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLVKTAVKMMTTQRK 513
EATVGE++D ++ E +++ N + S+ L++ D L D +K K TT RK
Sbjct: 448 EATVGEVLDRLAEETQLNREQMNCFALFVYSESMSLQLQPDSLIDGKLKVD-KWNTTIRK 506
>DQ372920-1|ABD16184.1| 729|Caenorhabditis elegans Krev interaction
trapped/cerebralcavernous malformation 1 isoform a
protein.
Length = 729
Score = 30.3 bits (65), Expect = 5.6
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 454 EATVGELVDSMSPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLVKTAVKMMTTQRK 513
EATVGE++D ++ E +++ N + S+ L++ D L D +K K TT RK
Sbjct: 448 EATVGEVLDRLAEETQLNREQMNCFALFVYSESMSLQLQPDSLIDGKLKVD-KWNTTIRK 506
>AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical
protein T05E7.3 protein.
Length = 997
Score = 30.3 bits (65), Expect = 5.6
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 239 CGIQKLGGGSLSTENNEEAIRLAEQHTIAVEKRLSKIDTTESTGCLYGLMYDGTLLVVGF 298
C + KL + S + + A R+A ++ A+EK L + + L+G+MY+ + +G
Sbjct: 530 CYMLKLKLSNFS-DKDHVASRIANTYSYALEKNLKTVLQSVPQH-LFGIMYNVIMPGLGK 587
Query: 299 SLESFETETEKNSYSQLLLN 318
+ E + +TE S+ + N
Sbjct: 588 TFEPYIEKTELRELSEFVTN 607
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 30.3 bits (65), Expect = 5.6
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Query: 119 IDLKDLCIVPDKLAWVVYCDMVCIDHDGSLVDACIIALIASFKTLLLPSVNYDTETEEIK 178
IDL D V + W D D +++ L++ ++ L ++ +T E I+
Sbjct: 87 IDLSDENCVEHLIRWKGIIDKNKSDFTSTIIVGNKHDLVSEKRSPRLTAIIRETNDEYIE 146
Query: 179 VETNERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYE 218
R N+K VA EH SQIILL +P E
Sbjct: 147 TSAKMRKNIKKLFSSVACR-PFPEHETSQIILLNEPRPVE 185
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 7.5
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Query: 447 GLTGTSTEATVGELVDSM-----SPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLV 501
GL T+A V EL D + + + K K + +AE L L + + + ++KL
Sbjct: 1200 GLRKKHTDA-VAELTDQLDQLNKAKAKVEKDKAQAVRDAEDLAAQLDQETSGKLNNEKLA 1258
Query: 502 KTAVKMMTTQRKPAFYISMPLRIDTLAMIHRNTKLLDLYIVL--VEAACRSLRLMESVLI 559
K +T + A S L+ T +++ DL L E+ L ++S L
Sbjct: 1259 KQFELQLTELQSKADEQSRQLQDFTSLKGRLHSENGDLVRQLEDAESQVNQLTRLKSQLT 1318
Query: 560 EQLEKERRTLHEQ 572
QLE+ RRT E+
Sbjct: 1319 SQLEEARRTADEE 1331
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 7.5
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Query: 447 GLTGTSTEATVGELVDSM-----SPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLV 501
GL T+A V EL D + + + K K + +AE L L + + + ++KL
Sbjct: 1200 GLRKKHTDA-VAELTDQLDQLNKAKAKVEKDKAQAVRDAEDLAAQLDQETSGKLNNEKLA 1258
Query: 502 KTAVKMMTTQRKPAFYISMPLRIDTLAMIHRNTKLLDLYIVL--VEAACRSLRLMESVLI 559
K +T + A S L+ T +++ DL L E+ L ++S L
Sbjct: 1259 KQFELQLTELQSKADEQSRQLQDFTSLKGRLHSENGDLVRQLEDAESQVNQLTRLKSQLT 1318
Query: 560 EQLEKERRTLHEQ 572
QLE+ RRT E+
Sbjct: 1319 SQLEEARRTADEE 1331
>Z78062-2|CAB01499.2| 689|Caenorhabditis elegans Hypothetical
protein F16D3.2 protein.
Length = 689
Score = 29.9 bits (64), Expect = 7.5
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 462 DSMSPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLVKTAVKMM 508
D+ SP+ +++N ++ + P L + D+LS K+ K K+M
Sbjct: 284 DASSPDLADLARRFNSSSINVQPQPLESVASSDVLSKKIAKAVRKIM 330
>Z75553-6|CAA99951.1| 534|Caenorhabditis elegans Hypothetical
protein ZC443.6 protein.
Length = 534
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 173 ETEEIKVETNERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIIS 232
+TE I+ E+ +L I +FA+++ + ++ D T Y M G G IS
Sbjct: 129 QTELIEQLRKEKFDLAITESLFLGAFALFDEIGIRSVINADSTLYMGGMKGALGEPAAIS 188
Query: 233 YNKGLLCGI 241
Y GL I
Sbjct: 189 YYPGLFSSI 197
>Z75529-9|CAA99789.1| 534|Caenorhabditis elegans Hypothetical
protein ZC443.6 protein.
Length = 534
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 173 ETEEIKVETNERINLKIHGLPVATSFAVYEHFQSQIILLTDPTNYEEEMCGGNGSNLIIS 232
+TE I+ E+ +L I +FA+++ + ++ D T Y M G G IS
Sbjct: 129 QTELIEQLRKEKFDLAITESLFLGAFALFDEIGIRSVINADSTLYMGGMKGALGEPAAIS 188
Query: 233 YNKGLLCGI 241
Y GL I
Sbjct: 189 YYPGLFSSI 197
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 29.9 bits (64), Expect = 7.5
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Query: 447 GLTGTSTEATVGELVDSM-----SPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLV 501
GL T+A V EL D + + + K K + +AE L L + + + ++KL
Sbjct: 1203 GLRKKHTDA-VAELTDQLDQLNKAKAKVEKDKAQAVRDAEDLAAQLDQETSGKLNNEKLA 1261
Query: 502 KTAVKMMTTQRKPAFYISMPLRIDTLAMIHRNTKLLDLYIVL--VEAACRSLRLMESVLI 559
K +T + A S L+ T +++ DL L E+ L ++S L
Sbjct: 1262 KQFELQLTELQSKADEQSRQLQDFTSLKGRLHSENGDLVRQLEDAESQVNQLTRLKSQLT 1321
Query: 560 EQLEKERRTLHEQ 572
QLE+ RRT E+
Sbjct: 1322 SQLEEARRTADEE 1334
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.135 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,116,053
Number of Sequences: 27539
Number of extensions: 877889
Number of successful extensions: 2219
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2204
Number of HSP's gapped (non-prelim): 26
length of query: 805
length of database: 12,573,161
effective HSP length: 87
effective length of query: 718
effective length of database: 10,177,268
effective search space: 7307278424
effective search space used: 7307278424
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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