Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001187-TA|BGIBMGA001187-PA|undefined
(834 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 27 0.40
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 27 0.40
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 27 0.40
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 27 0.40
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 27 0.40
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 27 0.40
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 27 0.40
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 27 0.52
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 23 8.5
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.5 bits (58), Expect = 0.40
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 456 DTALKQQPSPTTPRLSPQASTNQLLAQQLTNP----PQPLNTPKMQSAIIHIQHPLMSTA 511
D + P +TP LS +++N + LT+P P P +A ++ P ST+
Sbjct: 115 DLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTS 174
Query: 512 SATQVQ 517
S + +
Sbjct: 175 STSSTE 180
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 27.5 bits (58), Expect = 0.40
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 456 DTALKQQPSPTTPRLSPQASTNQLLAQQLTNP----PQPLNTPKMQSAIIHIQHPLMSTA 511
D + P +TP LS +++N + LT+P P P +A ++ P ST+
Sbjct: 115 DLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTS 174
Query: 512 SATQVQ 517
S + +
Sbjct: 175 STSSTE 180
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.5 bits (58), Expect = 0.40
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 456 DTALKQQPSPTTPRLSPQASTNQLLAQQLTNP----PQPLNTPKMQSAIIHIQHPLMSTA 511
D + P +TP LS +++N + LT+P P P +A ++ P ST+
Sbjct: 115 DLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTS 174
Query: 512 SATQVQ 517
S + +
Sbjct: 175 STSSTE 180
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 27.5 bits (58), Expect = 0.40
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 456 DTALKQQPSPTTPRLSPQASTNQLLAQQLTNP----PQPLNTPKMQSAIIHIQHPLMSTA 511
D + P +TP LS +++N + LT+P P P +A ++ P ST+
Sbjct: 115 DLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTS 174
Query: 512 SATQVQ 517
S + +
Sbjct: 175 STSSTE 180
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 27.5 bits (58), Expect = 0.40
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 456 DTALKQQPSPTTPRLSPQASTNQLLAQQLTNP----PQPLNTPKMQSAIIHIQHPLMSTA 511
D + P +TP LS +++N + LT+P P P +A ++ P ST+
Sbjct: 71 DLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTS 130
Query: 512 SATQVQ 517
S + +
Sbjct: 131 STSSTE 136
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 27.5 bits (58), Expect = 0.40
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 456 DTALKQQPSPTTPRLSPQASTNQLLAQQLTNP----PQPLNTPKMQSAIIHIQHPLMSTA 511
D + P +TP LS +++N + LT+P P P +A ++ P ST+
Sbjct: 115 DLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTS 174
Query: 512 SATQVQ 517
S + +
Sbjct: 175 STSSTE 180
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 27.5 bits (58), Expect = 0.40
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 456 DTALKQQPSPTTPRLSPQASTNQLLAQQLTNP----PQPLNTPKMQSAIIHIQHPLMSTA 511
D + P +TP LS +++N + LT+P P P +A ++ P ST+
Sbjct: 115 DLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTS 174
Query: 512 SATQVQ 517
S + +
Sbjct: 175 STSSTE 180
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 27.1 bits (57), Expect = 0.52
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 456 DTALKQQPSPTTPRLSPQASTNQLLAQQLTNPPQPLNTPKMQSAIIHIQHPLMSTASAT 514
D + P +TP LS +++N + LT+P +P + A L S AS+T
Sbjct: 115 DLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASST 173
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 23.0 bits (47), Expect = 8.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 459 LKQQPSPTTPRLSPQASTNQLLAQQLTNPPQP 490
+KQQ +P P +P S + L L+ P P
Sbjct: 66 VKQQTAPHGPPYAPHPSLSSGLGGGLSGMPMP 97
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.315 0.130 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,129
Number of Sequences: 317
Number of extensions: 4829
Number of successful extensions: 38
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 24
length of query: 834
length of database: 114,650
effective HSP length: 63
effective length of query: 771
effective length of database: 94,679
effective search space: 72997509
effective search space used: 72997509
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)
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