GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001187-TA|BGIBMGA001187-PA|undefined
         (834 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   3.5  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   8.2  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   8.2  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    25   8.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   8.2  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 3.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)

Query: 710 PGLSAPISLSLNVSGAPSG 728
           PGLSAP+ L +   G P G
Sbjct: 558 PGLSAPLGLGMRPQGGPLG 576


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 8.2
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 622 AATTASHTIPTYTQQGVGVQVMSGYTRDSEAINVSSSESALLERLIGSDAP 672
           A+   + T  T T    G    S  TRD  ++ V  S   + +  +GSD P
Sbjct: 36  ASPVPACTTTTSTTSTSGASAASSPTRDEMSVVVPISPLHIKQEPLGSDGP 86


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 8.2
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 622 AATTASHTIPTYTQQGVGVQVMSGYTRDSEAINVSSSESALLERLIGSDAP 672
           A+   + T  T T    G    S  TRD  ++ V  S   + +  +GSD P
Sbjct: 36  ASPVPACTTTTSTTSTSGASAASSPTRDEMSVVVPISPLHIKQEPLGSDGP 86


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 25.0 bits (52), Expect = 8.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 30  GYSLSLKVNGNMQYETLIETPRW 52
           GY L+L +    Q ETL+    W
Sbjct: 187 GYMLNLTIGSEPQIETLVSNSEW 209


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.0 bits (52), Expect = 8.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 42   QYETLIETPRWPYEEEELLSYIDNE 66
            QY T I  P+   E+  +L YI N+
Sbjct: 1619 QYSTFIHEPKHHQEDPPVLKYIKNQ 1643


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.130    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,941
Number of Sequences: 2123
Number of extensions: 19560
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 8
length of query: 834
length of database: 516,269
effective HSP length: 70
effective length of query: 764
effective length of database: 367,659
effective search space: 280891476
effective search space used: 280891476
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)