Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001186-TA|BGIBMGA001186-PA|IPR009018|Signal recognition
particle, 9 kDa and 14 kDa protein, IPR008832|Signal recognition
particle 9 kDa
(78 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071180-1|AAL48802.1| 77|Drosophila melanogaster RE23260p pro... 95 8e-21
AE014296-1346|AAF50504.1| 77|Drosophila melanogaster CG8268-PA... 95 8e-21
AE014134-2953|AAN11009.1| 838|Drosophila melanogaster CG31791-P... 27 4.1
AY060743-1|AAL28291.1| 509|Drosophila melanogaster GH19637p pro... 26 5.5
AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro... 26 5.5
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P... 26 5.5
AE013599-3103|AAM68189.1| 509|Drosophila melanogaster CG30291-P... 26 5.5
X52286-1|CAA36529.1| 506|Drosophila melanogaster catalase protein. 26 7.2
U00145-1|AAC13738.1| 506|Drosophila melanogaster catalase protein. 26 7.2
AY084154-1|AAL89892.1| 506|Drosophila melanogaster RE33242p pro... 26 7.2
AE014296-3061|AAF49228.1| 506|Drosophila melanogaster CG6871-PA... 26 7.2
AE014296-1382|AAF50478.1| 283|Drosophila melanogaster CG13675-P... 26 7.2
AY226550-1|AAO47376.1| 502|Drosophila melanogaster pickpocket 2... 25 9.6
AY071339-1|AAL48961.1| 587|Drosophila melanogaster RE37593p pro... 25 9.6
AE014298-2578|AAX52503.1| 502|Drosophila melanogaster CG8527-PB... 25 9.6
AE014296-2427|AAF49707.2| 587|Drosophila melanogaster CG9384-PA... 25 9.6
>AY071180-1|AAL48802.1| 77|Drosophila melanogaster RE23260p
protein.
Length = 77
Score = 95.5 bits (227), Expect = 8e-21
Identities = 42/77 (54%), Positives = 56/77 (72%)
Query: 1 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 60
M FV NW++FE A E +YL +P N R ++KY+HSKG +K+TDN KC+QYK E D+R
Sbjct: 1 MVFVKNWDDFEIAVENMYLANPQNCRLTMKYAHSKGHILLKMTDNVKCVQYKAENMPDLR 60
Query: 61 KIDKFMSNLLRHMASND 77
KI+K SNL+ HMAS +
Sbjct: 61 KIEKITSNLVGHMASKE 77
>AE014296-1346|AAF50504.1| 77|Drosophila melanogaster CG8268-PA
protein.
Length = 77
Score = 95.5 bits (227), Expect = 8e-21
Identities = 42/77 (54%), Positives = 56/77 (72%)
Query: 1 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 60
M FV NW++FE A E +YL +P N R ++KY+HSKG +K+TDN KC+QYK E D+R
Sbjct: 1 MVFVKNWDDFEIAVENMYLANPQNCRLTMKYAHSKGHILLKMTDNVKCVQYKAENMPDLR 60
Query: 61 KIDKFMSNLLRHMASND 77
KI+K SNL+ HMAS +
Sbjct: 61 KIEKITSNLVGHMASKE 77
>AE014134-2953|AAN11009.1| 838|Drosophila melanogaster CG31791-PA
protein.
Length = 838
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 19 LQDPINTRYSVKYSHS----KGAFNVKITD--NKKCLQYKTEVQQDV 59
L DPI RY +K+ +S + N K D K+ ++ KT+++QD+
Sbjct: 668 LTDPIQMRYHIKWVNSCMDQRLMLNCKREDLLRKELMELKTKLEQDM 714
>AY060743-1|AAL28291.1| 509|Drosophila melanogaster GH19637p
protein.
Length = 509
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 55 VQQDVRKIDKFMSNLLRHMASND 77
VQQ++R+I + +SN L+ M SN+
Sbjct: 29 VQQELREIHRKISNALQDMPSNE 51
>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire protein.
Length = 5233
Score = 26.2 bits (55), Expect = 5.5
Identities = 12/25 (48%), Positives = 12/25 (48%)
Query: 6 NWEEFEKAAEMLYLQDPINTRYSVK 30
N EF LY QDP N RY K
Sbjct: 2669 NCVEFSLETASLYAQDPHNNRYGFK 2693
>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
protein.
Length = 5233
Score = 26.2 bits (55), Expect = 5.5
Identities = 12/25 (48%), Positives = 12/25 (48%)
Query: 6 NWEEFEKAAEMLYLQDPINTRYSVK 30
N EF LY QDP N RY K
Sbjct: 2669 NCVEFSLETASLYAQDPHNNRYGFK 2693
>AE013599-3103|AAM68189.1| 509|Drosophila melanogaster CG30291-PA
protein.
Length = 509
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 55 VQQDVRKIDKFMSNLLRHMASND 77
VQQ++R+I + +SN L+ M SN+
Sbjct: 29 VQQELREIHRKISNALQDMPSNE 51
>X52286-1|CAA36529.1| 506|Drosophila melanogaster catalase protein.
Length = 506
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 18 YLQDPINTRYSVKYSHSKGAFNVKITDNK 46
YLQ P+N Y VK + + + +TDN+
Sbjct: 368 YLQIPVNCPYKVKIENFQRDGAMNVTDNQ 396
>U00145-1|AAC13738.1| 506|Drosophila melanogaster catalase protein.
Length = 506
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 18 YLQDPINTRYSVKYSHSKGAFNVKITDNK 46
YLQ P+N Y VK + + + +TDN+
Sbjct: 368 YLQIPVNCPYKVKIENFQRDGAMNVTDNQ 396
>AY084154-1|AAL89892.1| 506|Drosophila melanogaster RE33242p
protein.
Length = 506
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 18 YLQDPINTRYSVKYSHSKGAFNVKITDNK 46
YLQ P+N Y VK + + + +TDN+
Sbjct: 368 YLQIPVNCPYKVKIENFQRDGAMNVTDNQ 396
>AE014296-3061|AAF49228.1| 506|Drosophila melanogaster CG6871-PA
protein.
Length = 506
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 18 YLQDPINTRYSVKYSHSKGAFNVKITDNK 46
YLQ P+N Y VK + + + +TDN+
Sbjct: 368 YLQIPVNCPYKVKIENFQRDGAMNVTDNQ 396
>AE014296-1382|AAF50478.1| 283|Drosophila melanogaster CG13675-PA
protein.
Length = 283
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 6 NWEEFEKAAEMLYLQDPINTRYSVKYSHS 34
N +FE AE+ + I +Y++ Y HS
Sbjct: 243 NTNKFENDAELKDYKSKIKNKYNIDYDHS 271
>AY226550-1|AAO47376.1| 502|Drosophila melanogaster pickpocket 23
long form protein.
Length = 502
Score = 25.4 bits (53), Expect = 9.6
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 16 MLYLQDPINTRY-SVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVRKIDKFM 66
+LYL N S+K F IT+ K CLQ + + V IDK +
Sbjct: 366 LLYLTPKANVPMCSIKDFDCLDEFKSNITNIKDCLQCELSCSKTVFNIDKLI 417
>AY071339-1|AAL48961.1| 587|Drosophila melanogaster RE37593p
protein.
Length = 587
Score = 25.4 bits (53), Expect = 9.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 27 YSVKYSHSKGAFNVKITDN 45
Y + Y+HSKG F V++ D+
Sbjct: 270 YLMAYAHSKGTFYVQLEDD 288
>AE014298-2578|AAX52503.1| 502|Drosophila melanogaster CG8527-PB,
isoform B protein.
Length = 502
Score = 25.4 bits (53), Expect = 9.6
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 16 MLYLQDPINTRY-SVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVRKIDKFM 66
+LYL N S+K F IT+ K CLQ + + V IDK +
Sbjct: 366 LLYLTPKANVPMCSIKDFDCLDEFKSNITNIKDCLQCELSCSKTVFNIDKLI 417
>AE014296-2427|AAF49707.2| 587|Drosophila melanogaster CG9384-PA
protein.
Length = 587
Score = 25.4 bits (53), Expect = 9.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 27 YSVKYSHSKGAFNVKITDN 45
Y + Y+HSKG F V++ D+
Sbjct: 270 YLMAYAHSKGTFYVQLEDD 288
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.317 0.129 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,594,298
Number of Sequences: 52641
Number of extensions: 112244
Number of successful extensions: 317
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 304
Number of HSP's gapped (non-prelim): 16
length of query: 78
length of database: 24,830,863
effective HSP length: 58
effective length of query: 20
effective length of database: 21,777,685
effective search space: 435553700
effective search space used: 435553700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
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