GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001185-TA|BGIBMGA001185-PA|IPR011059|Metal-dependent
hydrolase, composite, IPR003764|N-acetylglucosamine-6-phosphate
deacetylase, IPR006680|Amidohydrolase 1
         (398 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   5.1  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   5.1  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
          castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 47 SDITVDCEDLLIAPGFIDIQIN 68
          SDI  +CE  L   GF  +QI+
Sbjct: 38 SDIADECERFLAPKGFGGVQIS 59


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
          protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 47 SDITVDCEDLLIAPGFIDIQIN 68
          SDI  +CE  L   GF  +QI+
Sbjct: 39 SDIADECERFLAPKGFGGVQIS 60


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.138    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,176
Number of Sequences: 317
Number of extensions: 4007
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 398
length of database: 114,650
effective HSP length: 58
effective length of query: 340
effective length of database: 96,264
effective search space: 32729760
effective search space used: 32729760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)