GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001185-TA|BGIBMGA001185-PA|IPR011059|Metal-dependent
hydrolase, composite, IPR003764|N-acetylglucosamine-6-phosphate
deacetylase, IPR006680|Amidohydrolase 1
         (398 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            27   0.91 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            27   0.91 
AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione S-tran...    26   2.1  
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    24   6.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   8.4  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    24   8.4  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    24   8.4  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 27.1 bits (57), Expect = 0.91
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 12 NCYILRDRKIIKEDLWIRDGKIENPERVF 40
          NCY L       + LWIRDG  +  +R F
Sbjct: 44 NCYRLEGESREWKALWIRDGFFDEKQREF 72


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 27.1 bits (57), Expect = 0.91
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 12 NCYILRDRKIIKEDLWIRDGKIENPERVF 40
          NCY L       + LWIRDG  +  +R F
Sbjct: 44 NCYRLEGESREWKALWIRDGFFDGKQREF 72


>AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione
           S-transferase E3 protein.
          Length = 223

 Score = 25.8 bits (54), Expect = 2.1
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 130 ATVLGVHLEGPFISPTKKGAHVESYIK-NPHRGIDTIRE 167
           A ++G+ L+  +I   KK    E Y+K NP   + T+ +
Sbjct: 22  AKMIGIELDVQYIDLAKKENMTEEYLKMNPMHTVPTVND 60


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 6.4
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 6/64 (9%)

Query: 179 TLAPE-LPGCFEAIKDLTNLGIKVALGHSIASLAEGEKAVECGANLITHLFNAMLPFHHR 237
           T  PE +P   EA K  T +         +  L +   ++  G+     +FNA LP H++
Sbjct: 87  TFKPETVPVQHEAYKSFTEVE-----SSKVNELQQALSSLNAGSGSCAEVFNAYLPVHNK 141

Query: 238 DPGL 241
             G+
Sbjct: 142 YIGV 145


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 8.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 235 HHRDPGLVGLLASTMKKQ 252
           HH  PGL GL+ +  ++Q
Sbjct: 164 HHHHPGLTGLMQAPSQQQ 181


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 8.4
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 241 LVGLLASTMKKQVYYGIIADGIHTHPAALRIANR 274
           L G+LA T++   YY  IA      P  L   NR
Sbjct: 313 LAGVLACTVESISYYPTIAQMCAAPPPPLHAINR 346


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 23.8 bits (49), Expect = 8.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 113 YRQILPRIKKTQGNKNGATV 132
           Y++IL  I+K Q N+   TV
Sbjct: 42  YKEILTTIRKPQANRRSGTV 61


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.138    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,362
Number of Sequences: 2123
Number of extensions: 17492
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 9
length of query: 398
length of database: 516,269
effective HSP length: 65
effective length of query: 333
effective length of database: 378,274
effective search space: 125965242
effective search space used: 125965242
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)