GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001185-TA|BGIBMGA001185-PA|IPR011059|Metal-dependent
hydrolase, composite, IPR003764|N-acetylglucosamine-6-phosphate
deacetylase, IPR006680|Amidohydrolase 1
         (398 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089672-1|AAL90410.1|  417|Drosophila melanogaster RH44722p pro...   464   e-131
AE014298-3001|AAF50923.1|  417|Drosophila melanogaster CG17065-P...   464   e-131
AY119103-1|AAM50963.1|  853|Drosophila melanogaster RE06730p pro...    33   0.91 
AE014297-2882|AAF55818.1|  853|Drosophila melanogaster CG3822-PA...    33   0.91 
BT003750-1|AAO41414.1|  380|Drosophila melanogaster RH26374p pro...    32   1.6  
AY058557-1|AAL13786.1|  380|Drosophila melanogaster LD24887p pro...    32   1.6  
AE014296-3361|AAF51596.1|  380|Drosophila melanogaster CG5231-PA...    32   1.6  
Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protei...    30   4.9  
AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p pro...    30   4.9  
AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA...    30   4.9  

>AY089672-1|AAL90410.1|  417|Drosophila melanogaster RH44722p
           protein.
          Length = 417

 Score =  464 bits (1145), Expect = e-131
 Identities = 222/398 (55%), Positives = 294/398 (73%), Gaps = 6/398 (1%)

Query: 1   MKSKSGLTRFHNCYILRDRKIIKEDLWIRDGKIENPERVFYVEQLESDITVDCEDLLIAP 60
           + S   L +F NC ++RD +II +DLW+RDG+I NPE VF+ E+ ++   +DC   +IAP
Sbjct: 20  LASSQRLLQFTNCRLVRDHRIIHDDLWVRDGRIVNPEPVFFDERTKAHCRIDCGGAIIAP 79

Query: 61  GFIDIQINGGWGVDFSRDSDNIEEGVAKVAKNLLAHGVTAFCPTMITSDQEIYRQILPRI 120
           G+ID+QINGG+GVDFS D++ IEEGVA VA+ L+  GVT+FCPT++TS  + Y  ILPRI
Sbjct: 80  GYIDLQINGGYGVDFSYDTETIEEGVATVARGLVKSGVTSFCPTLVTSPSDSYHTILPRI 139

Query: 121 KKTQGNKNGATVLGVHLEGPFISPTKKGAHVESYIKNPHRGIDTIREVYGSLDNVVIITL 180
                   GA +LG+H EGPFI+P KKGAH E  I+   +G+ T++E YGSL+ + IITL
Sbjct: 140 PAEV--PKGAGILGIHAEGPFINPQKKGAHPEHCIQTIDKGLSTLKETYGSLERIKIITL 197

Query: 181 APELPGCFEAIKDLTNLGIKVALGHSIASLAEGEKAVECGANLITHLFNAMLPFHHRDPG 240
           APE     E I  L   GI VALGHS+ASL++GE+AV+ GA LITHLFNAMLPFHHRDPG
Sbjct: 198 APEKVTDPEVIGQLVERGITVALGHSMASLSDGERAVQQGATLITHLFNAMLPFHHRDPG 257

Query: 241 LVGLLASTM---KKQVYYGIIADGIHTHPAALRIANRTNPEGLVLVSDAVPAQGLPDGNH 297
           LVGLLAS      + VY+GII+DG+HTHPAALRIA RT+P+GL+LV+DA+ A GL +G H
Sbjct: 258 LVGLLASDAVPHGRTVYFGIISDGVHTHPAALRIAYRTHPQGLILVTDAISALGLEEGVH 317

Query: 298 RIGPQIVTVEDGCAYVTGTKTLCGSTTALDSCIVKFKDSIECSLEYALEAASLHPAKALG 357
            IG   + V+ G A++ GT+TLCGS   +D C+  F+ + +CS+ YA+EAA+LHPA+ L 
Sbjct: 318 HIGQLPLQVKQGKAFIAGTETLCGSIAPMDECVRIFQKATDCSVVYAIEAATLHPAQCLK 377

Query: 358 IDDKKGNLNFDSDADFVILHPKTLKVQSTWIAGECVYK 395
           I+ +KG L+F SDADFV+L  + L+V STWIAG CV++
Sbjct: 378 IEKQKGTLDFGSDADFVLLDDQ-LRVLSTWIAGVCVHR 414


>AE014298-3001|AAF50923.1|  417|Drosophila melanogaster CG17065-PA
           protein.
          Length = 417

 Score =  464 bits (1145), Expect = e-131
 Identities = 222/398 (55%), Positives = 294/398 (73%), Gaps = 6/398 (1%)

Query: 1   MKSKSGLTRFHNCYILRDRKIIKEDLWIRDGKIENPERVFYVEQLESDITVDCEDLLIAP 60
           + S   L +F NC ++RD +II +DLW+RDG+I NPE VF+ E+ ++   +DC   +IAP
Sbjct: 20  LASSQRLLQFTNCRLVRDHRIIHDDLWVRDGRIVNPEPVFFDERTKAHCRIDCGGAIIAP 79

Query: 61  GFIDIQINGGWGVDFSRDSDNIEEGVAKVAKNLLAHGVTAFCPTMITSDQEIYRQILPRI 120
           G+ID+QINGG+GVDFS D++ IEEGVA VA+ L+  GVT+FCPT++TS  + Y  ILPRI
Sbjct: 80  GYIDLQINGGYGVDFSYDTETIEEGVATVARGLVKSGVTSFCPTLVTSPSDSYHTILPRI 139

Query: 121 KKTQGNKNGATVLGVHLEGPFISPTKKGAHVESYIKNPHRGIDTIREVYGSLDNVVIITL 180
                   GA +LG+H EGPFI+P KKGAH E  I+   +G+ T++E YGSL+ + IITL
Sbjct: 140 PAEV--PKGAGILGIHAEGPFINPQKKGAHPEHCIQTIDKGLSTLKETYGSLERIKIITL 197

Query: 181 APELPGCFEAIKDLTNLGIKVALGHSIASLAEGEKAVECGANLITHLFNAMLPFHHRDPG 240
           APE     E I  L   GI VALGHS+ASL++GE+AV+ GA LITHLFNAMLPFHHRDPG
Sbjct: 198 APEKVTDPEVIGQLVERGITVALGHSMASLSDGERAVQQGATLITHLFNAMLPFHHRDPG 257

Query: 241 LVGLLASTM---KKQVYYGIIADGIHTHPAALRIANRTNPEGLVLVSDAVPAQGLPDGNH 297
           LVGLLAS      + VY+GII+DG+HTHPAALRIA RT+P+GL+LV+DA+ A GL +G H
Sbjct: 258 LVGLLASDAVPHGRTVYFGIISDGVHTHPAALRIAYRTHPQGLILVTDAISALGLEEGVH 317

Query: 298 RIGPQIVTVEDGCAYVTGTKTLCGSTTALDSCIVKFKDSIECSLEYALEAASLHPAKALG 357
            IG   + V+ G A++ GT+TLCGS   +D C+  F+ + +CS+ YA+EAA+LHPA+ L 
Sbjct: 318 HIGQLPLQVKQGKAFIAGTETLCGSIAPMDECVRIFQKATDCSVVYAIEAATLHPAQCLK 377

Query: 358 IDDKKGNLNFDSDADFVILHPKTLKVQSTWIAGECVYK 395
           I+ +KG L+F SDADFV+L  + L+V STWIAG CV++
Sbjct: 378 IEKQKGTLDFGSDADFVLLDDQ-LRVLSTWIAGVCVHR 414


>AY119103-1|AAM50963.1|  853|Drosophila melanogaster RE06730p
           protein.
          Length = 853

 Score = 32.7 bits (71), Expect = 0.91
 Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)

Query: 58  IAPGFIDIQINGGWGVDFSRDSDNIEEGVAKVAKNLLAHGVTAFCPTM-ITSDQEIYRQI 116
           ++  ++DI  + GW   F+   +N  +G+ ++ + L AHG+T F  T+   SD   YR +
Sbjct: 144 LSKAYVDIVRHWGWKT-FTIIYEN-NDGIVRLQELLKAHGMTPFPITVRQLSDSGDYRPL 201

Query: 117 LPRIKKT 123
           L +IK +
Sbjct: 202 LKQIKNS 208


>AE014297-2882|AAF55818.1|  853|Drosophila melanogaster CG3822-PA
           protein.
          Length = 853

 Score = 32.7 bits (71), Expect = 0.91
 Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)

Query: 58  IAPGFIDIQINGGWGVDFSRDSDNIEEGVAKVAKNLLAHGVTAFCPTM-ITSDQEIYRQI 116
           ++  ++DI  + GW   F+   +N  +G+ ++ + L AHG+T F  T+   SD   YR +
Sbjct: 144 LSKAYVDIVRHWGWKT-FTIIYEN-NDGIVRLQELLKAHGMTPFPITVRQLSDSGDYRPL 201

Query: 117 LPRIKKT 123
           L +IK +
Sbjct: 202 LKQIKNS 208


>BT003750-1|AAO41414.1|  380|Drosophila melanogaster RH26374p
           protein.
          Length = 380

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 163 DTIREVYGSLDNVVIITLAPELPGCFEAIKDLTNLGIKVALGHSIASL 210
           +T+RE+     N+ +  L P+  G  E +K + N G+ V   H+I ++
Sbjct: 195 ETVREIKARNSNIFVECLVPDFRGNLECVKTIANSGLDV-YAHNIETV 241


>AY058557-1|AAL13786.1|  380|Drosophila melanogaster LD24887p
           protein.
          Length = 380

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 163 DTIREVYGSLDNVVIITLAPELPGCFEAIKDLTNLGIKVALGHSIASL 210
           +T+RE+     N+ +  L P+  G  E +K + N G+ V   H+I ++
Sbjct: 195 ETVREIKARNSNIFVECLVPDFRGNLECVKTIANSGLDV-YAHNIETV 241


>AE014296-3361|AAF51596.1|  380|Drosophila melanogaster CG5231-PA,
           isoform A protein.
          Length = 380

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 163 DTIREVYGSLDNVVIITLAPELPGCFEAIKDLTNLGIKVALGHSIASL 210
           +T+RE+     N+ +  L P+  G  E +K + N G+ V   H+I ++
Sbjct: 195 ETVREIKARNSNIFVECLVPDFRGNLECVKTIANSGLDV-YAHNIETV 241


>Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protein
           SA protein.
          Length = 1116

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 20/77 (25%), Positives = 31/77 (40%)

Query: 74  DFSRDSDNIEEGVAKVAKNLLAHGVTAFCPTMITSDQEIYRQILPRIKKTQGNKNGATVL 133
           D   +S +  +   K    L A G     P +I  D++ +   + R +KT   + G T  
Sbjct: 14  DALNESTSDADSPTKRMTRLRARGGVRDKPPIIDDDEDDFFAPIARKRKTPATRKGPTER 73

Query: 134 GVHLEGPFISPTKKGAH 150
              +E P   P  KG H
Sbjct: 74  KERVERPRKEPVDKGHH 90


>AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p
           protein.
          Length = 1127

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 20/77 (25%), Positives = 31/77 (40%)

Query: 74  DFSRDSDNIEEGVAKVAKNLLAHGVTAFCPTMITSDQEIYRQILPRIKKTQGNKNGATVL 133
           D   +S +  +   K    L A G     P +I  D++ +   + R +KT   + G T  
Sbjct: 25  DALNESTSDADSPTKRMTRLRARGGVRDKPPIIDDDEDDFFAPIARKRKTPATRKGPTER 84

Query: 134 GVHLEGPFISPTKKGAH 150
              +E P   P  KG H
Sbjct: 85  KERVERPRKEPVDKGHH 101


>AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA
           protein.
          Length = 1127

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 20/77 (25%), Positives = 31/77 (40%)

Query: 74  DFSRDSDNIEEGVAKVAKNLLAHGVTAFCPTMITSDQEIYRQILPRIKKTQGNKNGATVL 133
           D   +S +  +   K    L A G     P +I  D++ +   + R +KT   + G T  
Sbjct: 25  DALNESTSDADSPTKRMTRLRARGGVRDKPPIIDDDEDDFFAPIARKRKTPATRKGPTER 84

Query: 134 GVHLEGPFISPTKKGAH 150
              +E P   P  KG H
Sbjct: 85  KERVERPRKEPVDKGHH 101


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.138    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,861,447
Number of Sequences: 52641
Number of extensions: 848991
Number of successful extensions: 1579
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1565
Number of HSP's gapped (non-prelim): 10
length of query: 398
length of database: 24,830,863
effective HSP length: 87
effective length of query: 311
effective length of database: 20,251,096
effective search space: 6298090856
effective search space used: 6298090856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)