GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001182-TA|BGIBMGA001182-PA|IPR010736|Protein of unknown
function DUF1309
         (1316 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      32   0.035
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   7.1  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   7.1  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   7.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   7.1  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    24   9.4  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      24   9.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   9.4  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 31.9 bits (69), Expect = 0.035
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 190 DRILHQSAPSF-SMRSKDVVDKVEHTPAPNMYS 221
           DR LH ++PSF S  S+D    +  TP+P MYS
Sbjct: 117 DRRLHDNSPSFLSDHSRDQEQNLYLTPSPQMYS 149


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 7.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query: 983 EKGYKLILTYSPKHT 997
           EKG K+IL + P HT
Sbjct: 111 EKGLKIILDFVPNHT 125


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
          protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 7.1
 Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 4/71 (5%)

Query: 13 KRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVP 72
          K+  P  S+T   + ++A+    G    + D +  +++   P   +    ++KP TA++ 
Sbjct: 3  KKEKPMMSVTAIIQGTQAQHWSRGNTWLSLDNSNMSMSSVGPQSPL----DMKPDTASLI 58

Query: 73 GPGVYCPEKTN 83
           PG + P   N
Sbjct: 59 NPGNFSPSGPN 69


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
          protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 7.1
 Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 4/71 (5%)

Query: 13 KRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPRRELKPPTAAVP 72
          K+  P  S+T   + ++A+    G    + D +  +++   P   +    ++KP TA++ 
Sbjct: 3  KKEKPMMSVTAIIQGTQAQHWSRGNTWLSLDNSNMSMSSVGPQSPL----DMKPDTASLI 58

Query: 73 GPGVYCPEKTN 83
           PG + P   N
Sbjct: 59 NPGNFSPSGPN 69


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 7.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query: 983 EKGYKLILTYSPKHT 997
           EKG K+IL + P HT
Sbjct: 111 EKGLKIILDFVPNHT 125


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 23.8 bits (49), Expect = 9.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 841 PEKSENLVHEHSPSYSFRPKFTDE 864
           PE  ++L +++ P   FR KF +E
Sbjct: 99  PELWDSLANKYDPDKKFRVKFEEE 122


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 9.4
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 28  SEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAP--RRELKPPTAAVPGPG 75
           SEAK   P PG++    AA A T+  P     P     L+PP  A    G
Sbjct: 296 SEAKIFPPTPGSFNFSMAALA-TEHTPLSVKFPGMGHGLQPPDLAGTSQG 344


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 9.4
 Identities = 13/36 (36%), Positives = 15/36 (41%)

Query: 1078 VTPPRRIERQNTHEVTNPSTNLSRTPDLNGIKENRS 1113
            V P  R E   TH         SR+ DLN  +E  S
Sbjct: 69   VYPLLRFENPETHHPIRHGRRQSRSMDLNAHREQMS 104


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.309    0.131    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,233
Number of Sequences: 429
Number of extensions: 32916
Number of successful extensions: 61
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 57
Number of HSP's gapped (non-prelim): 9
length of query: 1316
length of database: 140,377
effective HSP length: 66
effective length of query: 1250
effective length of database: 112,063
effective search space: 140078750
effective search space used: 140078750
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 49 (23.8 bits)