GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001181-TA|BGIBMGA001181-PA|undefined
         (77 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    19   5.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    19   5.4  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    19   9.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    19   9.4  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 19.4 bits (38), Expect = 5.4
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 32  TVTGDDQLDVRDATPASSQHEFLFFGRNGPI 62
           + T D   +  +    S QHEF+ F  + P+
Sbjct: 345 STTADVLQEEEEEYSPSVQHEFVTFDLDEPL 375


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.4 bits (38), Expect = 5.4
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 9   AKLFTTKVVNAVTAKEKRRCYFCTVTGDDQLDVRDATPASS 49
           AK++T+ V + +T  +        + GD  + V  +T  ++
Sbjct: 528 AKIYTSSVNSNLTVNQTVNPVAINIPGDTSIIVDSSTSGAT 568


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 18.6 bits (36), Expect = 9.4
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 2   ENAGQSAAKLFTTKVVNAVTAKEKRRCYFCTVTGDDQLD 40
           ++AG+ A  L     + ++  K     +F  + GD  +D
Sbjct: 376 DDAGRFAKLLLRLPAIRSIGLKCLEYLFFFKMIGDVPID 414


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 18.6 bits (36), Expect = 9.4
 Identities = 9/39 (23%), Positives = 18/39 (46%)

Query: 2   ENAGQSAAKLFTTKVVNAVTAKEKRRCYFCTVTGDDQLD 40
           ++AG+ A  L     + ++  K     +F  + GD  +D
Sbjct: 376 DDAGRFAKLLLRLPAIRSIGLKCLEYLFFFKMIGDVPID 414


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.135    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,859
Number of Sequences: 429
Number of extensions: 685
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 77
length of database: 140,377
effective HSP length: 46
effective length of query: 31
effective length of database: 120,643
effective search space:  3739933
effective search space used:  3739933
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.6 bits)
S2: 36 (18.6 bits)