Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001180-TA|BGIBMGA001180-PA|IPR001356|Homeobox,
IPR000047|Helix-turn-helix motif, lambda-like repressor,
IPR009057|Homeodomain-like
(132 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0134 + 26161904-26162776 43 9e-05
07_03_0126 - 13797395-13797451,13797590-13797707,13797802-13798004 42 1e-04
03_02_0033 - 5148513-5148806,5148928-5149271,5149391-5149472 42 1e-04
04_04_0667 + 27097741-27098085,27098203-27098547 42 2e-04
10_07_0134 + 13289641-13290216,13290435-13290914 41 4e-04
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 40 5e-04
07_03_1043 + 23506148-23506226,23506344-23506693,23506782-23507075 40 7e-04
09_06_0034 + 20370672-20371109,20371120-20371515 40 9e-04
09_04_0468 + 17848144-17848174,17849032-17849378,17849505-17849921 40 9e-04
02_05_0618 + 30400338-30400452,30400553-30400692,30400805-304010... 40 9e-04
08_02_1031 - 23796755-23797171,23797243-23797595,23797676-23797715 39 0.001
04_04_0710 - 27453135-27453480,27453647-27453726,27453893-274541... 39 0.001
01_06_0040 - 25874308-25874611,25875743-25875822,25876764-258769... 39 0.001
08_02_0670 - 19877091-19877618,19880033-19880436,19880505-19880622 39 0.002
02_01_0380 + 2757691-2758080,2758389-2758712 39 0.002
01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387 38 0.002
04_04_0841 - 28574497-28574883,28575815-28576188,28576262-285764... 38 0.003
08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160 37 0.005
06_01_0290 + 2122758-2123015,2123128-2123544 37 0.005
03_01_0630 + 4635297-4636220 37 0.005
09_03_0144 - 12728697-12729238,12729312-12729432 37 0.006
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 37 0.006
08_01_0574 + 5103466-5103534,5104526-5104806,5104959-5105127 36 0.008
04_04_1231 - 31934745-31935125,31935230-31935325,31936215-319362... 36 0.008
02_04_0278 - 21507288-21507726,21507893-21507972,21508587-215088... 36 0.008
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 36 0.011
10_08_0929 + 21633179-21633377,21633466-21633809,21633905-21634297 36 0.014
10_08_1025 - 22391267-22391767,22392641-22392736,22392838-223931... 35 0.019
10_06_0180 + 11526139-11526172,11526365-11527218 35 0.024
09_06_0020 - 20267190-20267612,20269086-20269495,20269573-202697... 35 0.024
06_01_0292 + 2136637-2137050,2137162-2137671 35 0.024
09_04_0318 - 16620177-16620582,16620686-16620765,16620873-166212... 34 0.032
06_03_1261 - 28814617-28814890,28814989-28815068,28815287-28815703 34 0.032
03_02_0256 + 6899424-6899876,6900084-6900163,6900475-6900820 34 0.032
06_01_0741 - 5510159-5510581,5510862-5511124,5511223-5511400,551... 32 0.13
08_02_0940 - 22822391-22822781,22822875-22823053,22823079-228234... 30 0.53
01_06_1818 - 40093327-40093384,40093501-40093580,40093661-400939... 30 0.53
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 29 1.2
08_02_0052 + 11699468-11699700,11699799-11699916,11699991-117006... 29 1.6
03_05_0648 - 26403249-26403357,26405142-26405284,26405425-264056... 27 4.9
01_06_0968 + 33466574-33466607,33467087-33467115,33467438-334675... 27 4.9
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673... 26 8.6
05_03_0501 + 14744913-14745107,14745545-14745571,14746002-147460... 26 8.6
>02_05_0134 + 26161904-26162776
Length = 290
Score = 42.7 bits (96), Expect = 9e-05
Identities = 23/45 (51%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 15 YSDHQRLELEKEFHYSRY-ITIRRKAELAVSLGLSERQVKIWFQN 58
+++ Q LE FH R + R KAELA LGL RQV IWFQN
Sbjct: 68 FTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQN 112
>07_03_0126 - 13797395-13797451,13797590-13797707,13797802-13798004
Length = 125
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 15 YSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
++D Q LE F Y+ ++ +LA LG+ ERQVK WFQN
Sbjct: 58 HTDDQIKHLESVFERCTYLGGNQRVQLAKKLGMEERQVKFWFQN 101
>03_02_0033 - 5148513-5148806,5148928-5149271,5149391-5149472
Length = 239
Score = 42.3 bits (95), Expect = 1e-04
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
SD Q LE F R + RK +LA LGL +QV +WFQN
Sbjct: 66 SDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQN 108
>04_04_0667 + 27097741-27098085,27098203-27098547
Length = 229
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 15 YSDHQRLELEKEFH-YSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+++ Q LE FH + + R KAELA LGL RQV IWFQN
Sbjct: 30 FTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQN 74
>10_07_0134 + 13289641-13290216,13290435-13290914
Length = 351
Score = 40.7 bits (91), Expect = 4e-04
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LE+ F + RKA+LA +LGL RQV IWFQN
Sbjct: 116 LERSFESGNKLEPERKAQLARALGLQPRQVAIWFQN 151
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 40.3 bits (90), Expect = 5e-04
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LEK F + RK +LA +LGL RQV IWFQN
Sbjct: 142 LEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQN 177
>07_03_1043 + 23506148-23506226,23506344-23506693,23506782-23507075
Length = 240
Score = 39.9 bits (89), Expect = 7e-04
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
SD Q LE F R + RK LA LGL +QV +WFQN
Sbjct: 67 SDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQN 109
>09_06_0034 + 20370672-20371109,20371120-20371515
Length = 277
Score = 39.5 bits (88), Expect = 9e-04
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 15 YSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+S+ Q LE F + R+K +LA LGL RQV IWFQN
Sbjct: 34 FSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQN 77
>09_04_0468 +
17848144-17848174,17849032-17849378,17849505-17849921
Length = 264
Score = 39.5 bits (88), Expect = 9e-04
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LE+ F + RKA LA LGL RQV +WFQN
Sbjct: 50 LERSFEVENKLEPERKARLARDLGLQPRQVAVWFQN 85
>02_05_0618 +
30400338-30400452,30400553-30400692,30400805-30401044,
30401157-30401693
Length = 343
Score = 39.5 bits (88), Expect = 9e-04
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LE+ F + RK ELA LGL RQV +WFQN
Sbjct: 89 LERSFEEENKLEPERKTELARKLGLQPRQVAVWFQN 124
>08_02_1031 -
23796755-23797171,23797243-23797595,23797676-23797715
Length = 269
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LE+ F + RKA LA LGL RQV +WFQN
Sbjct: 55 LERSFETENKLEPERKARLARDLGLQPRQVAVWFQN 90
>04_04_0710 -
27453135-27453480,27453647-27453726,27453893-27454107,
27454227-27454329
Length = 247
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S Q LE F + R+KA LA LGL RQV++WFQN
Sbjct: 87 SKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQN 129
>01_06_0040 -
25874308-25874611,25875743-25875822,25876764-25876996,
25877285-25877354
Length = 228
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S Q LE+ F + +T ++K LA+ L L RQV++WFQN
Sbjct: 82 SKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQN 124
>08_02_0670 - 19877091-19877618,19880033-19880436,19880505-19880622
Length = 349
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LE+ F + RK ELA LG++ RQV +WFQN
Sbjct: 98 LERSFEEENKLEPERKTELARRLGMAPRQVAVWFQN 133
>02_01_0380 + 2757691-2758080,2758389-2758712
Length = 237
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LE F ++ K ELA LGLS RQV++WFQN
Sbjct: 118 LEDSFRAHNILSHAEKQELAGKLGLSARQVEVWFQN 153
>01_06_0212 +
27575406-27575604,27575723-27576241,27576371-27576387
Length = 244
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWF 56
R++ S +Q LEK + +Y + +AEL+ +GLS+RQ+++WF
Sbjct: 50 RMMKSPYQLEVLEKTYAVEQYPSETLRAELSAKIGLSDRQLQMWF 94
>04_04_0841 -
28574497-28574883,28575815-28576188,28576262-28576439,
28576816-28576896,28578134-28578361,28578460-28578579,
28578646-28579353,28579471-28579588,28579686-28579978,
28580101-28580169
Length = 851
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 15 YSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
++ Q ELE F + +++AEL+ LGL RQVK WFQN
Sbjct: 111 HTPQQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQN 154
>08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160
Length = 749
Score = 37.1 bits (82), Expect = 0.005
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+++ R K +R ++ HQ ELE F + +++ EL+ LGL QVK WFQN
Sbjct: 84 NQRPRKKRYHR--HTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 138
>06_01_0290 + 2122758-2123015,2123128-2123544
Length = 224
Score = 37.1 bits (82), Expect = 0.005
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S Q LE+ F +T ++K LA SL L RQV++WFQN
Sbjct: 67 SKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQN 109
>03_01_0630 + 4635297-4636220
Length = 307
Score = 37.1 bits (82), Expect = 0.005
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LE+ F + RKA +A LGL RQV +WFQN
Sbjct: 54 LERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQN 89
>09_03_0144 - 12728697-12729238,12729312-12729432
Length = 220
Score = 36.7 bits (81), Expect = 0.006
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 23 LEKEFHYS-RYITIRRKAELAVSLGLSERQVKIWFQN 58
LE+ F R + RK+ELA LG++ RQV +WFQN
Sbjct: 104 LERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQN 140
>05_07_0112 -
27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 36.7 bits (81), Expect = 0.006
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWF 56
RV+ + +Q LE+ + Y +AEL+V LGL++RQ+++WF
Sbjct: 60 RVMKTPYQLEVLERTYTEDPYPNETMRAELSVKLGLTDRQLQMWF 104
>08_01_0574 + 5103466-5103534,5104526-5104806,5104959-5105127
Length = 172
Score = 36.3 bits (80), Expect = 0.008
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+++ R K +R ++ HQ E+E F + +++ EL+ LGL QVK WFQN
Sbjct: 96 NQRPRKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 150
>04_04_1231 -
31934745-31935125,31935230-31935325,31936215-31936277,
31936393-31936593,31936738-31936839,31936972-31937430,
31937524-31937712,31938325-31938442,31939033-31939307,
31939853-31939930
Length = 653
Score = 36.3 bits (80), Expect = 0.008
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+++ R K +R ++ HQ E+E F + +++ EL+ LGL QVK WFQN
Sbjct: 97 NQRPRKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 151
>02_04_0278 -
21507288-21507726,21507893-21507972,21508587-21508840,
21508988-21509180
Length = 321
Score = 36.3 bits (80), Expect = 0.008
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S Q LE F +T ++K++LA L L RQV++WFQN
Sbjct: 130 SKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQN 172
>02_05_0286 -
27506925-27507278,27508439-27508812,27509041-27509218,
27510878-27511105,27511215-27511316,27511415-27512131,
27512270-27512387,27512500-27512744,27512854-27513054,
27513920-27514324
Length = 973
Score = 35.9 bits (79), Expect = 0.011
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S + K +Y ++ Q ELE F + +++AEL+ L L RQVK WFQN
Sbjct: 262 SNSRKRKKRYHR-HTPQQIQELEALFKECPHPDEKQRAELSRRLSLDARQVKFWFQN 317
>10_08_0929 + 21633179-21633377,21633466-21633809,21633905-21634297
Length = 311
Score = 35.5 bits (78), Expect = 0.014
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S Q LE F + ++KA LA L L RQV++WFQN
Sbjct: 162 SKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQN 204
>10_08_1025 -
22391267-22391767,22392641-22392736,22392838-22393106,
22393257-22393431,22393503-22393718,22393819-22393926,
22394020-22394544,22394631-22394819,22394924-22395041,
22395172-22395437,22395521-22395658
Length = 866
Score = 35.1 bits (77), Expect = 0.019
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 15 YSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
++ HQ ++E F + +++ +L+ LGL RQVK WFQN
Sbjct: 125 HTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQN 168
>10_06_0180 + 11526139-11526172,11526365-11527218
Length = 295
Score = 34.7 bits (76), Expect = 0.024
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LE+ F + RKA +A L L RQV +WFQN
Sbjct: 67 LERSFEADNKLDPERKARIARDLRLHPRQVAVWFQN 102
>09_06_0020 -
20267190-20267612,20269086-20269495,20269573-20269747,
20270833-20271066,20271164-20271265,20271354-20272091,
20272204-20272321,20272417-20272667,20272768-20272932
Length = 871
Score = 34.7 bits (76), Expect = 0.024
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R K K ++ Q ELE F + +++ EL+ L L RQVK WFQN
Sbjct: 120 RKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQN 172
>06_01_0292 + 2136637-2137050,2137162-2137671
Length = 307
Score = 34.7 bits (76), Expect = 0.024
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S Q LE+ F + ++K LA LGL RQV++WFQN
Sbjct: 119 SKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQN 161
>09_04_0318 -
16620177-16620582,16620686-16620765,16620873-16621213,
16621298-16621559
Length = 362
Score = 34.3 bits (75), Expect = 0.032
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S Q LE+ F + ++K LA L L RQV++WFQN
Sbjct: 182 SKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQN 224
>06_03_1261 - 28814617-28814890,28814989-28815068,28815287-28815703
Length = 256
Score = 34.3 bits (75), Expect = 0.032
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LE F ++ +K ELA L L RQV++WFQN
Sbjct: 127 LEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQN 162
>03_02_0256 + 6899424-6899876,6900084-6900163,6900475-6900820
Length = 292
Score = 34.3 bits (75), Expect = 0.032
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 7 TKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
T+ K R+ + Q LE F + ++K LA L L RQV++WFQN
Sbjct: 125 TRKKLRL--TKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQN 174
>06_01_0741 -
5510159-5510581,5510862-5511124,5511223-5511400,
5511411-5511698,5511801-5511899,5511973-5512440,
5512559-5512744,5512887-5513004,5513035-5513228
Length = 738
Score = 32.3 bits (70), Expect = 0.13
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 37 RKAELAVSLGLSERQVKIWFQN 58
++A+L+ LGL RQ+K WFQN
Sbjct: 77 QRAQLSRELGLEPRQIKFWFQN 98
>08_02_0940 -
22822391-22822781,22822875-22823053,22823079-22823428,
22823522-22823765
Length = 387
Score = 30.3 bits (65), Expect = 0.53
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 36 RRKAELAVSLGLSERQVKIWFQN 58
++K LA L L RQV++WFQN
Sbjct: 232 KQKVALAKQLNLRPRQVEVWFQN 254
>01_06_1818 - 40093327-40093384,40093501-40093580,40093661-40093946,
40095007-40095291,40095386-40095513,40095625-40096560,
40096650-40096712,40096801-40096854,40096963-40097139,
40097452-40097583,40097666-40097785,40097935-40098627,
40098760-40099158,40099263-40099271
Length = 1139
Score = 30.3 bits (65), Expect = 0.53
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S+ Q LE + + K LA L + RQV++WFQN
Sbjct: 1075 SEEQLTVLENMYEAGSNLDQALKQGLAEKLNIKPRQVEVWFQN 1117
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQ 57
LE+ + +Y AE A S+GL+ QV+IWF+
Sbjct: 443 LERFYSEVQYPQSEDIAEYATSVGLTYNQVRIWFK 477
>08_02_0052 +
11699468-11699700,11699799-11699916,11699991-11700659,
11700741-11700842,11700921-11701181,11701838-11702009,
11702128-11702528,11703171-11703587
Length = 790
Score = 28.7 bits (61), Expect = 1.6
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 1 MSRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
M TR K + + + Q+ L + F +LA L ++E Q+K WFQN
Sbjct: 54 MDTCTRKKPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKELNMTETQIKYWFQN 111
>03_05_0648 -
26403249-26403357,26405142-26405284,26405425-26405675,
26405707-26405713
Length = 169
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 28 HYS-RYITIRRKAELAVSLGLSERQVKIWFQN 58
HY Y + KA LA S GL ++QV WF N
Sbjct: 79 HYRWPYPSEAEKAALAESTGLDKKQVTNWFIN 110
>01_06_0968 +
33466574-33466607,33467087-33467115,33467438-33467595,
33468319-33468436,33468520-33468708,33469008-33469343,
33469468-33469569,33469696-33469890,33469993-33470155,
33470314-33470579,33470670-33470765,33470860-33471255,
33471403-33471501
Length = 726
Score = 27.1 bits (57), Expect = 4.9
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 2 SRKTRTKDKYRVVYSDHQRLE-LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S T K K R+ ++ E LE F + +K L+ + GL QVK WFQN
Sbjct: 50 SSNTNEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQN 107
>06_01_0878 +
6735266-6735340,6735946-6736041,6738610-6738720,
6738816-6739309,6739422-6739587,6739666-6739789,
6739874-6739986,6740085-6740693,6743095-6743385,
6743845-6743913,6744099-6744188,6744281-6744696,
6744882-6744969
Length = 913
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 21 LELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
L+L+ F Y + K LA LGL+ QV WF +
Sbjct: 716 LKLKAHFKEDPYPSRATKENLAQELGLTFNQVTKWFSS 753
>05_03_0501 +
14744913-14745107,14745545-14745571,14746002-14746097,
14746479-14746769
Length = 202
Score = 26.2 bits (55), Expect = 8.6
Identities = 9/21 (42%), Positives = 17/21 (80%)
Query: 36 RRKAELAVSLGLSERQVKIWF 56
+R+ E A LGL+++Q+++WF
Sbjct: 98 QRQVESAGELGLTDKQLQMWF 118
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.134 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,586,414
Number of Sequences: 37544
Number of extensions: 37789
Number of successful extensions: 110
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67
Number of HSP's gapped (non-prelim): 43
length of query: 132
length of database: 14,793,348
effective HSP length: 75
effective length of query: 57
effective length of database: 11,977,548
effective search space: 682720236
effective search space used: 682720236
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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