Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001180-TA|BGIBMGA001180-PA|IPR001356|Homeobox,
IPR000047|Helix-turn-helix motif, lambda-like repressor,
IPR009057|Homeodomain-like
(132 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 110 5e-27
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 94 4e-22
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 73 7e-16
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 73 7e-16
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 73 7e-16
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 69 2e-14
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 69 2e-14
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 69 2e-14
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 68 3e-14
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 68 3e-14
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 68 3e-14
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 68 3e-14
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 68 3e-14
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 68 3e-14
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 68 3e-14
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 68 3e-14
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 68 3e-14
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 65 2e-13
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 65 2e-13
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 64 3e-13
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 64 3e-13
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 64 3e-13
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 64 5e-13
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 64 5e-13
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 60 7e-12
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 60 7e-12
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 60 9e-12
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 58 2e-11
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 58 2e-11
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 58 2e-11
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 58 2e-11
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 58 2e-11
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 56 1e-10
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 54 6e-10
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 54 6e-10
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 52 2e-09
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 50 5e-09
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 48 2e-08
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 47 5e-08
AY563109-1|AAS99587.1| 46|Tribolium castaneum aristaless protein. 43 8e-07
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 42 2e-06
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 35 3e-04
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 34 4e-04
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 26 0.13
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 22 2.2
AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like pr... 21 5.0
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 110 bits (264), Expect = 5e-27
Identities = 51/55 (92%), Positives = 54/55 (98%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
KTRTKDKYRVVY+DHQR+ELEKEF+YSRYITIRRKAELA SLGLSERQVKIWFQN
Sbjct: 152 KTRTKDKYRVVYTDHQRVELEKEFYYSRYITIRRKAELANSLGLSERQVKIWFQN 206
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 93.9 bits (223), Expect = 4e-22
Identities = 44/56 (78%), Positives = 52/56 (92%), Gaps = 1/56 (1%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHY-SRYITIRRKAELAVSLGLSERQVKIWFQN 58
KTRTKDKYRVVY+D QR+ELEKEF + S+YITI+RK+ELA +LGLSERQ+KIWFQN
Sbjct: 152 KTRTKDKYRVVYTDLQRIELEKEFTFVSKYITIKRKSELAENLGLSERQIKIWFQN 207
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 73.3 bits (172), Expect = 7e-16
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ R Y+ HQ LELEKEFHY+RY+T RR+ E+A +L LSERQ+KIWFQN
Sbjct: 235 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQN 283
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 73.3 bits (172), Expect = 7e-16
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ R Y+ HQ LELEKEFHY+RY+T RR+ E+A +L LSERQ+KIWFQN
Sbjct: 235 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQN 283
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 73.3 bits (172), Expect = 7e-16
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ R Y+ HQ LELEKEFHY+RY+T RR+ E+A +L LSERQ+KIWFQN
Sbjct: 235 RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQN 283
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 68.5 bits (160), Expect = 2e-14
Identities = 29/47 (61%), Positives = 39/47 (82%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R Y+ +Q LELEKEFH+++Y+T RR+ E+A SL L+ERQ+KIWFQN
Sbjct: 187 RQTYTRYQTLELEKEFHFNKYLTRRRRIEIAESLRLTERQIKIWFQN 233
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 68.5 bits (160), Expect = 2e-14
Identities = 29/47 (61%), Positives = 39/47 (82%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R Y+ +Q LELEKEFH+++Y+T RR+ E+A SL L+ERQ+KIWFQN
Sbjct: 187 RQTYTRYQTLELEKEFHFNKYLTRRRRIEIAESLRLTERQIKIWFQN 233
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 68.5 bits (160), Expect = 2e-14
Identities = 29/47 (61%), Positives = 39/47 (82%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R Y+ +Q LELEKEFH+++Y+T RR+ E+A SL L+ERQ+KIWFQN
Sbjct: 187 RQTYTRYQTLELEKEFHFNKYLTRRRRIEIAESLRLTERQIKIWFQN 233
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 68.1 bits (159), Expect = 3e-14
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ R Y+ +Q LELEKEFH++RY+T RR+ E+A +L L+ERQ+KIWFQN
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 270
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 68.1 bits (159), Expect = 3e-14
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ R Y+ +Q LELEKEFH++RY+T RR+ E+A +L L+ERQ+KIWFQN
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 270
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 68.1 bits (159), Expect = 3e-14
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ R Y+ +Q LELEKEFH++RY+T RR+ E+A +L L+ERQ+KIWFQN
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 270
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 68.1 bits (159), Expect = 3e-14
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ R Y+ +Q LELEKEFH++RY+T RR+ E+A +L L+ERQ+KIWFQN
Sbjct: 178 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 226
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 68.1 bits (159), Expect = 3e-14
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ R Y+ +Q LELEKEFH++RY+T RR+ E+A +L L+ERQ+KIWFQN
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 270
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 68.1 bits (159), Expect = 3e-14
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ R Y+ +Q LELEKEFH++RY+T RR+ E+A +L L+ERQ+KIWFQN
Sbjct: 10 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 58
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 68.1 bits (159), Expect = 3e-14
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ R Y+ +Q LELEKEFH++RY+T RR+ E+A +L L+ERQ+KIWFQN
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 270
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 67.7 bits (158), Expect = 3e-14
Identities = 29/47 (61%), Positives = 39/47 (82%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R Y+ +Q LELEKEFH++RY+T RR+ E+A +L L+ERQ+KIWFQN
Sbjct: 246 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 292
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 67.7 bits (158), Expect = 3e-14
Identities = 29/47 (61%), Positives = 39/47 (82%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R Y+ +Q LELEKEFH++RY+T RR+ E+A +L L+ERQ+KIWFQN
Sbjct: 248 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 294
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 64.9 bits (151), Expect = 2e-13
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQN
Sbjct: 6 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQN 54
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 64.9 bits (151), Expect = 2e-13
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ R Y++ Q LELEKEFH+++Y+ R+ E+A SL L+ERQVK+WFQN
Sbjct: 137 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQN 185
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 64.5 bits (150), Expect = 3e-13
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R Y+ Q LELEKEFH++ Y+T RR+ E+A +L L+ERQ+KIWFQN
Sbjct: 10 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 56
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 64.5 bits (150), Expect = 3e-13
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R Y+ Q LELEKEFH++ Y+T RR+ E+A +L L+ERQ+KIWFQN
Sbjct: 161 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 207
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 64.5 bits (150), Expect = 3e-13
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R Y+ Q LELEKEFH++ Y+T RR+ E+A +L L+ERQ+KIWFQN
Sbjct: 220 RQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 266
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 63.7 bits (148), Expect = 5e-13
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R Y+ +Q LELEKEFH + Y+T RR+ E+A +L L+ERQ+KIWFQN
Sbjct: 227 RQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQN 273
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 63.7 bits (148), Expect = 5e-13
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R Y+ +Q LELEKEFH + Y+T RR+ E+A +L L+ERQ+KIWFQN
Sbjct: 9 RQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQN 55
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 60.1 bits (139), Expect = 7e-12
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R Y+ Q +ELE+EFH+ +Y++ R+ ++A +L LSERQ+KIWFQN
Sbjct: 92 RTAYTSAQLVELEREFHHGKYLSRPRRIQIAENLNLSERQIKIWFQN 138
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 60.1 bits (139), Expect = 7e-12
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R Y+ Q +ELE+EFH+ +Y++ R+ ++A +L LSERQ+KIWFQN
Sbjct: 83 RTAYTSAQLVELEREFHHGKYLSRPRRIQIAENLNLSERQIKIWFQN 129
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 59.7 bits (138), Expect = 9e-12
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 7 TKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
T K R YS Q LELEKEF ++ Y++ +++ ELA +L L+ERQVKIWFQN
Sbjct: 242 TVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVKIWFQN 293
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 58.4 bits (135), Expect = 2e-11
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R +++ Q ELEKEFH+++Y+T R+ E+A +L L+E QVKIWFQN
Sbjct: 257 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQN 303
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 58.4 bits (135), Expect = 2e-11
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R Y+ Q +ELE+EFH S+Y+ R+ ++A +L L+ERQ+KIWFQN
Sbjct: 89 RTAYTSSQLVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQN 135
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 58.4 bits (135), Expect = 2e-11
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R Y+ Q +ELE+EFH S+Y+ R+ ++A +L L+ERQ+KIWFQN
Sbjct: 109 RTAYTSSQLVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQN 155
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 58.4 bits (135), Expect = 2e-11
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R +++ Q ELEKEFH+++Y+T R+ E+A +L L+E QVKIWFQN
Sbjct: 46 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQN 92
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 58.4 bits (135), Expect = 2e-11
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R +++ Q ELEKEFH+++Y+T R+ E+A +L L+E QVKIWFQN
Sbjct: 46 RTNFTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQN 92
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 55.6 bits (128), Expect = 1e-10
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K + K R +YS Q +L + F ++Y+ + +AELA SLGL++ QVKIWFQN
Sbjct: 117 KGKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQN 171
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 53.6 bits (123), Expect = 6e-10
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 5 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
T + + R +S Q L+ EF +RY+T RR+ +L+ LGL+E Q+KIWFQN
Sbjct: 225 TAEEKRPRTAFSGAQLARLKHEFAENRYLTERRRQQLSAELGLNEAQIKIWFQN 278
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 53.6 bits (123), Expect = 6e-10
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
RK + K R ++ Q L LEK+F +Y++I +AE + SL L+E QVKIWFQN
Sbjct: 110 RKHKPNRKPRTPFTTQQLLALEKKFRDKQYLSIAERAEFSSSLRLTEPQVKIWFQN 165
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 52.0 bits (119), Expect = 2e-09
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K + + ++ Q LELE+EF + Y++ R+ E+A L LSE+QVKIWFQN
Sbjct: 113 KDASSKRIXTAFTSTQLLELEREFASNMYLSRLRRIEIATCLRLSEKQVKIWFQN 167
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 50.4 bits (115), Expect = 5e-09
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+YR ++ Q LEKEF Y++ R+ ELA L L E +K+WFQN
Sbjct: 73 RYRTAFTREQLARLEKEFFKENYVSRPRRCELAAQLNLPESTIKVWFQN 121
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve
cord defective protein protein.
Length = 168
Score = 48.4 bits (110), Expect = 2e-08
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 8 KDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K K RV++S Q ELE+ F RY++ + LA + L+ QVKIWFQN
Sbjct: 40 KRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASIIRLTPTQVKIWFQN 90
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 47.2 bits (107), Expect = 5e-08
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQV 52
+ R Y+ +Q LELEKEFH++RY+T RR+ E+A +L L+ + +
Sbjct: 222 RQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTNKNL 264
>AY563109-1|AAS99587.1| 46|Tribolium castaneum aristaless
protein.
Length = 46
Score = 43.2 bits (97), Expect = 8e-07
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQ 57
R ++ +Q ELEK F + Y + + ELA+ +GL+E ++++WFQ
Sbjct: 1 RTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 46
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 41.5 bits (93), Expect = 2e-06
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R + + R ++ HQ ELEK F ++Y I + ELA L+E ++++WF N
Sbjct: 218 RKQRRSRTTFTAHQLDELEKAFERTQYPDIYTREELAQRTKLTEARIQVWFSN 270
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 34.7 bits (76), Expect = 3e-04
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R + + R ++ Q LE F +RY I + E+AV + L E +V++WF+N
Sbjct: 125 RKQRRERTTFTRAQLDLLEGLFAKTRYPDIFMREEVAVKINLPESRVQVWFKN 177
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 34.3 bits (75), Expect = 4e-04
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R + + R ++ Q LE F +RY I + E+A+ + L E +V++WF+N
Sbjct: 67 RKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKN 119
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 25.8 bits (54), Expect = 0.13
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Query: 19 QRLELEKEFHYSR----YITIRRKAELAVSLGLSERQVKIWFQN 58
Q E+ E+ YS Y + K ELA G++ QV WF N
Sbjct: 240 QASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGN 283
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.8 bits (44), Expect = 2.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 37 RKAELAVSLGLSERQVKIWFQN 58
+K +LA GL+ QV WF N
Sbjct: 366 QKKQLAQDTGLTILQVNNWFIN 387
>AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like
protein protein.
Length = 242
Score = 20.6 bits (41), Expect = 5.0
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 32 YITIRRKAELAVSLGLSERQVKIWFQN 58
Y T K LA+ ++ QV WF N
Sbjct: 111 YPTKGEKIMLAIITKMTLTQVSTWFAN 137
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.320 0.134 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,374
Number of Sequences: 317
Number of extensions: 315
Number of successful extensions: 47
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of query: 132
length of database: 114,650
effective HSP length: 51
effective length of query: 81
effective length of database: 98,483
effective search space: 7977123
effective search space used: 7977123
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.9 bits)
S2: 39 (19.8 bits)
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