Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001180-TA|BGIBMGA001180-PA|IPR001356|Homeobox,
IPR000047|Helix-turn-helix motif, lambda-like repressor,
IPR009057|Homeodomain-like
(132 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46241-10|CAH19082.1| 268|Caenorhabditis elegans Hypothetical p... 84 3e-17
Z46241-9|CAA86322.2| 270|Caenorhabditis elegans Hypothetical pr... 84 3e-17
X62782-1|CAA44619.1| 208|Caenorhabditis elegans pal-1 protein. 84 3e-17
X57140-1|CAA40419.1| 71|Caenorhabditis elegans ceh-3 protein. 84 3e-17
M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein ( C.ele... 66 8e-12
L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal p... 66 8e-12
AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein. 66 8e-12
L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protei... 65 1e-11
L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protei... 65 1e-11
AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell... 65 1e-11
Z77133-5|CAB00867.3| 232|Caenorhabditis elegans Hypothetical pr... 59 1e-09
AY205144-1|AAO46042.1| 156|Caenorhabditis elegans NK-2 family h... 59 1e-09
X17077-1|CAA34929.1| 202|Caenorhabditis elegans ceh-13 homeodom... 58 3e-09
AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical ... 58 3e-09
AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain p... 58 3e-09
AC006679-1|AAK84466.1| 202|Caenorhabditis elegans C.elegans hom... 58 3e-09
Z48621-10|CAA88539.1| 225|Caenorhabditis elegans Hypothetical p... 56 6e-09
AF286218-1|AAF88063.1| 225|Caenorhabditis elegans VAB-15 protein. 56 6e-09
Z81036-5|CAB02740.2| 134|Caenorhabditis elegans Hypothetical pr... 54 4e-08
L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeo... 53 6e-08
AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene... 53 6e-08
U55856-2|AAA98021.1| 197|Caenorhabditis elegans Touch abnormal ... 53 8e-08
AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans hom... 53 8e-08
AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans hom... 53 8e-08
Z32680-4|CAA83601.1| 273|Caenorhabditis elegans Hypothetical pr... 51 2e-07
Z11795-1|CAA77838.1| 130|Caenorhabditis elegans pceh16-1 protei... 51 2e-07
Z11794-1|CAA77837.1| 66|Caenorhabditis elegans ceh16-1 protein... 51 2e-07
U40933-7|AAA81676.4| 122|Caenorhabditis elegans C.elegans homeo... 51 2e-07
U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeo... 51 2e-07
AJ312288-1|CAC41972.1| 278|Caenorhabditis elegans putative tran... 51 2e-07
X52811-1|CAB57217.1| 60|Caenorhabditis elegans protein ( Caeno... 51 3e-07
Z82279-3|CAD62039.1| 106|Caenorhabditis elegans Hypothetical pr... 50 4e-07
Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical pr... 50 4e-07
AY151210-1|AAN72827.1| 106|Caenorhabditis elegans COG-1B protein. 50 4e-07
AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein. 50 4e-07
Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical pr... 50 5e-07
AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class ho... 50 5e-07
X52810-1|CAB57215.1| 67|Caenorhabditis elegans protein ( Caeno... 50 7e-07
U55376-2|AAA98004.1| 132|Caenorhabditis elegans C.elegans homeo... 50 7e-07
U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal line... 49 1e-06
AY246429-1|AAO91836.1| 209|Caenorhabditis elegans homeodomain p... 49 1e-06
AY246428-1|AAO91835.1| 209|Caenorhabditis elegans homeodomain p... 49 1e-06
AL033514-3|CAC70124.1| 218|Caenorhabditis elegans Hypothetical ... 49 1e-06
AF172090-1|AAD48874.1| 218|Caenorhabditis elegans homeodomain p... 49 1e-06
AF003137-4|AAB93639.2| 209|Caenorhabditis elegans C.elegans hom... 49 1e-06
Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical pr... 49 1e-06
Z73974-7|CAL90892.1| 283|Caenorhabditis elegans Hypothetical pr... 49 1e-06
Z73974-6|CAL90891.1| 215|Caenorhabditis elegans Hypothetical pr... 49 1e-06
Z73974-5|CAA98272.1| 346|Caenorhabditis elegans Hypothetical pr... 49 1e-06
U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeo... 49 1e-06
U10081-1|AAA20841.1| 346|Caenorhabditis elegans CEH-22 homeopro... 49 1e-06
U10080-1|AAA20840.1| 346|Caenorhabditis elegans CEH-22 homeopro... 49 1e-06
Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical pr... 47 4e-06
X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein. 47 4e-06
U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective phary... 47 4e-06
M72149-1|AAA28063.1| 60|Caenorhabditis elegans ceh-15 protein. 47 4e-06
AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein. 47 4e-06
AL033514-2|CAA22093.2| 233|Caenorhabditis elegans Hypothetical ... 47 5e-06
AF172091-1|AAD48875.1| 233|Caenorhabditis elegans NOB-1B protei... 47 5e-06
X17075-1|CAA34927.1| 75|Caenorhabditis elegans ceh-11 protein. 46 9e-06
L19247-1|AAC37166.1| 223|Caenorhabditis elegans homeobox protei... 46 9e-06
L15201-6|AAP82660.1| 222|Caenorhabditis elegans Egg laying defe... 46 9e-06
L15201-5|AAA27943.2| 219|Caenorhabditis elegans Egg laying defe... 46 9e-06
L15201-4|AAN84878.1| 223|Caenorhabditis elegans Egg laying defe... 46 9e-06
L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protei... 46 1e-05
L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeo... 46 1e-05
Z68008-6|CAA92001.1| 362|Caenorhabditis elegans Hypothetical pr... 44 3e-05
X52812-1|CAB57216.1| 66|Caenorhabditis elegans protein ( Caeno... 43 8e-05
U50184-2|AAB93323.1| 344|Caenorhabditis elegans C.elegans homeo... 43 8e-05
U19995-1|AAA93063.1| 344|Caenorhabditis elegans ceh-10 protein. 43 8e-05
AC006835-2|AAF40014.1| 229|Caenorhabditis elegans Hypothetical ... 43 8e-05
Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical pr... 42 1e-04
Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical pr... 42 1e-04
U41545-3|ABN43093.1| 152|Caenorhabditis elegans Hypothetical pr... 42 1e-04
L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain pro... 42 1e-04
Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical pr... 42 1e-04
AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein. 42 2e-04
AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans hom... 42 2e-04
Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical p... 39 0.001
Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical p... 39 0.001
AL132853-1|CAB60440.1| 234|Caenorhabditis elegans Hypothetical ... 39 0.001
Z66494-8|CAA91264.1| 84|Caenorhabditis elegans Hypothetical pr... 38 0.002
U64600-5|AAK39202.2| 223|Caenorhabditis elegans C.elegans homeo... 38 0.002
AF091459-1|AAC36745.1| 84|Caenorhabditis elegans homeodomain p... 38 0.002
U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical pr... 38 0.002
Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical pr... 38 0.003
X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein. 38 0.003
Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical pr... 36 0.013
U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-1... 36 0.013
U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable abnorm... 36 0.013
U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein. 36 0.013
U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein. 36 0.013
U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain fami... 35 0.022
AL132858-4|CAB60479.2| 338|Caenorhabditis elegans Hypothetical ... 33 0.067
AL132858-3|CAB60478.2| 391|Caenorhabditis elegans Hypothetical ... 33 0.067
AF381629-1|AAL12002.1| 223|Caenorhabditis elegans homeodomain p... 33 0.067
AF381628-1|AAL12001.1| 372|Caenorhabditis elegans homeodomain p... 33 0.067
AF381627-1|AAL12000.1| 332|Caenorhabditis elegans homeodomain p... 33 0.067
Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical pr... 33 0.088
AF038608-13|AAC25819.1| 253|Caenorhabditis elegans Hypothetical... 33 0.088
Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical pr... 32 0.12
AL031620-3|CAA20928.1| 310|Caenorhabditis elegans Hypothetical ... 32 0.15
Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical pr... 30 0.47
Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 30 0.47
U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative transc... 30 0.47
U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain fami... 30 0.47
M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein ( C.ele... 30 0.47
L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 30 0.47
Z95623-1|CAB09133.1| 314|Caenorhabditis elegans Hypothetical pr... 30 0.62
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 29 0.82
Z81124-12|CAI46579.2| 489|Caenorhabditis elegans Hypothetical p... 29 0.82
U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein. 29 1.1
U41550-4|AAP31434.2| 514|Caenorhabditis elegans Hypothetical pr... 29 1.1
AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain fa... 29 1.1
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 29 1.4
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 1.4
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 1.4
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 28 1.9
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 28 1.9
Z49908-6|CAA90100.3| 327|Caenorhabditis elegans Hypothetical pr... 28 2.5
U80839-15|AAB37911.1| 430|Caenorhabditis elegans Hypothetical p... 28 2.5
U70857-9|AAB09174.1| 261|Caenorhabditis elegans C.elegans homeo... 28 2.5
Z48783-8|CAA88702.2| 308|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z48582-6|CAA88468.2| 308|Caenorhabditis elegans Hypothetical pr... 27 3.3
AF025454-2|AAC71153.2| 186|Caenorhabditis elegans Hypothetical ... 27 3.3
Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical pr... 27 4.4
X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein ... 27 4.4
AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein. 27 4.4
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 27 5.8
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 27 5.8
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 27 5.8
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 26 7.7
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 26 7.7
>Z46241-10|CAH19082.1| 268|Caenorhabditis elegans Hypothetical
protein C38D4.6b protein.
Length = 268
Score = 84.2 bits (199), Expect = 3e-17
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ RT DKYR+VYSD+QRLELEKEFH S +IT RK++L+ L L+ERQ+KIWFQN
Sbjct: 200 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQN 254
>Z46241-9|CAA86322.2| 270|Caenorhabditis elegans Hypothetical
protein C38D4.6a protein.
Length = 270
Score = 84.2 bits (199), Expect = 3e-17
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ RT DKYR+VYSD+QRLELEKEFH S +IT RK++L+ L L+ERQ+KIWFQN
Sbjct: 202 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQN 256
>X62782-1|CAA44619.1| 208|Caenorhabditis elegans pal-1 protein.
Length = 208
Score = 84.2 bits (199), Expect = 3e-17
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ RT DKYR+VYSD+QRLELEKEFH S +IT RK++L+ L L+ERQ+KIWFQN
Sbjct: 140 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQN 194
>X57140-1|CAA40419.1| 71|Caenorhabditis elegans ceh-3 protein.
Length = 71
Score = 84.2 bits (199), Expect = 3e-17
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ RT DKYR+VYSD+QRLELEKEFH S +IT RK++L+ L L+ERQ+KIWFQN
Sbjct: 5 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQN 59
>M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein (
C.elegans DNA-bindingprotein (mab5) mRNA, 3' end. ).
Length = 211
Score = 66.1 bits (154), Expect = 8e-12
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R YS Q LELEKEFHY +Y+T +R+ E++ +L L+ERQVKIWFQN
Sbjct: 132 RQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQN 178
>L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal
protein 5 protein.
Length = 200
Score = 66.1 bits (154), Expect = 8e-12
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R YS Q LELEKEFHY +Y+T +R+ E++ +L L+ERQVKIWFQN
Sbjct: 121 RQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQN 167
>AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein.
Length = 200
Score = 66.1 bits (154), Expect = 8e-12
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R YS Q LELEKEFHY +Y+T +R+ E++ +L L+ERQVKIWFQN
Sbjct: 121 RQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQN 167
>L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 65.3 bits (152), Expect = 1e-11
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 5 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+R + + R Y+ +Q LELEKEFH +Y+T +R+ E+A SL L+ERQVKIWFQN
Sbjct: 162 SRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQN 215
>L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 65.3 bits (152), Expect = 1e-11
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 5 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+R + + R Y+ +Q LELEKEFH +Y+T +R+ E+A SL L+ERQVKIWFQN
Sbjct: 162 SRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQN 215
>AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell
lineage protein 39 protein.
Length = 253
Score = 65.3 bits (152), Expect = 1e-11
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 5 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+R + + R Y+ +Q LELEKEFH +Y+T +R+ E+A SL L+ERQVKIWFQN
Sbjct: 162 SRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQN 215
>Z77133-5|CAB00867.3| 232|Caenorhabditis elegans Hypothetical
protein K03A11.3 protein.
Length = 232
Score = 58.8 bits (136), Expect = 1e-09
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R + K K RV+++ HQ ELE+ F RY+T + ELA LGL+ QVKIWFQN
Sbjct: 130 RSQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQN 185
>AY205144-1|AAO46042.1| 156|Caenorhabditis elegans NK-2 family
homeodomain factorCEH-28 protein.
Length = 156
Score = 58.8 bits (136), Expect = 1e-09
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R + K K RV+++ HQ ELE+ F RY+T + ELA LGL+ QVKIWFQN
Sbjct: 86 RSQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQN 141
>X17077-1|CAA34929.1| 202|Caenorhabditis elegans ceh-13 homeodomain
protein protein.
Length = 202
Score = 57.6 bits (133), Expect = 3e-09
Identities = 25/47 (53%), Positives = 33/47 (70%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R ++ HQ ELEKEFH ++Y+ R+ E+A +L L E QVKIWFQN
Sbjct: 118 RTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKIWFQN 164
>AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical
protein Y75B8A.1 protein.
Length = 275
Score = 57.6 bits (133), Expect = 3e-09
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K R Y+ Q LELEKEF Y+ Y++ +++ ELA L L+ERQVKIWFQN
Sbjct: 201 KKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQN 249
>AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain
protein PHP-3 protein.
Length = 275
Score = 57.6 bits (133), Expect = 3e-09
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K R Y+ Q LELEKEF Y+ Y++ +++ ELA L L+ERQVKIWFQN
Sbjct: 201 KKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQN 249
>AC006679-1|AAK84466.1| 202|Caenorhabditis elegans C.elegans
homeobox protein 13 protein.
Length = 202
Score = 57.6 bits (133), Expect = 3e-09
Identities = 25/47 (53%), Positives = 33/47 (70%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R ++ HQ ELEKEFH ++Y+ R+ E+A +L L E QVKIWFQN
Sbjct: 118 RTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKIWFQN 164
>Z48621-10|CAA88539.1| 225|Caenorhabditis elegans Hypothetical
protein R07B1.1 protein.
Length = 225
Score = 56.4 bits (130), Expect = 6e-09
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 1 MSRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
M RK + K R +S Q + LE++F +Y++I +AE + SL L+E QVKIWFQN
Sbjct: 122 MLRKHKNNRKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSASLQLTETQVKIWFQN 179
>AF286218-1|AAF88063.1| 225|Caenorhabditis elegans VAB-15 protein.
Length = 225
Score = 56.4 bits (130), Expect = 6e-09
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 1 MSRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
M RK + K R +S Q + LE++F +Y++I +AE + SL L+E QVKIWFQN
Sbjct: 122 MLRKHKNNRKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSASLQLTETQVKIWFQN 179
>Z81036-5|CAB02740.2| 134|Caenorhabditis elegans Hypothetical
protein C16C2.1 protein.
Length = 134
Score = 53.6 bits (123), Expect = 4e-08
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R V++D Q +LE+ F+ S Y++ +A+LA SLGLS+ QVK+WFQN
Sbjct: 39 RTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQN 85
>L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeobox
protein 16 protein.
Length = 187
Score = 53.2 bits (122), Expect = 6e-08
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S + + + R ++ Q L+ EF SRY+T +R+ ELA LGL+E Q+KIWFQN
Sbjct: 81 SGSSEEEKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIKIWFQN 137
>AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene 16
protein.
Length = 187
Score = 53.2 bits (122), Expect = 6e-08
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S + + + R ++ Q L+ EF SRY+T +R+ ELA LGL+E Q+KIWFQN
Sbjct: 81 SGSSEEEKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIKIWFQN 137
>U55856-2|AAA98021.1| 197|Caenorhabditis elegans Touch abnormal
protein 1 protein.
Length = 197
Score = 52.8 bits (121), Expect = 8e-08
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 7 TKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
++ K R V+SD Q LE+ F RY++ + ELA +L LSE QVK WFQN
Sbjct: 119 SRRKARTVFSDQQLQGLERRFESQRYLSTPERIELANALNLSETQVKTWFQN 170
>AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans
homeobox protein 12 protein.
Length = 180
Score = 52.8 bits (121), Expect = 8e-08
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R +S Q ++LEK+F +RY++ R+ +LA L LSE Q+KIWFQN
Sbjct: 114 RTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQN 160
>AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans
homeobox protein 9 protein.
Length = 147
Score = 52.8 bits (121), Expect = 8e-08
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+KT+ K K R +S Q ELEK+F +Y++ ++ELA L ++E QVKIWFQN
Sbjct: 66 QKTKRK-KARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQN 120
>Z32680-4|CAA83601.1| 273|Caenorhabditis elegans Hypothetical
protein C28A5.4 protein.
Length = 273
Score = 51.2 bits (117), Expect = 2e-07
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K + K R +Y+ Q L+K+F ++Y+ + +A LA LGLS+ QVKIWFQN
Sbjct: 98 KGKKMRKPRTIYNSSQLQMLQKKFQKTQYLALPDRAALAHELGLSQTQVKIWFQN 152
>Z11795-1|CAA77838.1| 130|Caenorhabditis elegans pceh16-1 protein
protein.
Length = 130
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
SRK+ + K R YS Q LE EF +Y+++ ++ +L+ +L L+E Q+K WFQN
Sbjct: 19 SRKSVCERKPRQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQN 75
>Z11794-1|CAA77837.1| 66|Caenorhabditis elegans ceh16-1 protein
protein.
Length = 66
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
SRK+ + K R YS Q LE EF +Y+++ ++ +L+ +L L+E Q+K WFQN
Sbjct: 8 SRKSVCERKPRQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQN 64
>U40933-7|AAA81676.4| 122|Caenorhabditis elegans C.elegans
homeobox protein 19,isoform a protein.
Length = 122
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
SRK+ + K R YS Q LE EF +Y+++ ++ +L+ +L L+E Q+K WFQN
Sbjct: 11 SRKSVCERKPRQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQN 67
>U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeobox
protein 19,isoform b protein.
Length = 199
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
SRK+ + K R YS Q LE EF +Y+++ ++ +L+ +L L+E Q+K WFQN
Sbjct: 88 SRKSVCERKPRQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQN 144
>AJ312288-1|CAC41972.1| 278|Caenorhabditis elegans putative
transcription factor protein.
Length = 278
Score = 51.2 bits (117), Expect = 2e-07
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K + K R +Y+ Q L+K+F ++Y+ + +A LA LGLS+ QVKIWFQN
Sbjct: 103 KGKKMRKPRTIYNSSQLQMLQKKFQKTQYLALPDRAALAHELGLSQTQVKIWFQN 157
>X52811-1|CAB57217.1| 60|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-9 gene, unknown homeobox. ).
Length = 60
Score = 50.8 bits (116), Expect = 3e-07
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 8 KDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ K R +S Q ELEK+F +Y++ ++ELA L ++E QVKIWFQN
Sbjct: 1 RKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQN 51
>Z82279-3|CAD62039.1| 106|Caenorhabditis elegans Hypothetical
protein R03C1.3b protein.
Length = 106
Score = 50.4 bits (115), Expect = 4e-07
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 8 KDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K + R ++ HQ +LE++F ++Y+ +A+LA L +SE QVK+WFQN
Sbjct: 19 KKQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKVWFQN 69
>Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical
protein R03C1.3a protein.
Length = 256
Score = 50.4 bits (115), Expect = 4e-07
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 8 KDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K + R ++ HQ +LE++F ++Y+ +A+LA L +SE QVK+WFQN
Sbjct: 169 KKQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKVWFQN 219
>AY151210-1|AAN72827.1| 106|Caenorhabditis elegans COG-1B
protein.
Length = 106
Score = 50.4 bits (115), Expect = 4e-07
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 8 KDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K + R ++ HQ +LE++F ++Y+ +A+LA L +SE QVK+WFQN
Sbjct: 19 KKQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKVWFQN 69
>AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein.
Length = 256
Score = 50.4 bits (115), Expect = 4e-07
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 8 KDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K + R ++ HQ +LE++F ++Y+ +A+LA L +SE QVK+WFQN
Sbjct: 169 KKQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKVWFQN 219
>Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical
protein F55B12.1 protein.
Length = 299
Score = 50.0 bits (114), Expect = 5e-07
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K RV++S Q ELE+ F ++Y+T + +LA S+ L+ QVKIWFQN
Sbjct: 152 KRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKIWFQN 200
>AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class
homeodomain protein protein.
Length = 298
Score = 50.0 bits (114), Expect = 5e-07
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K RV++S Q ELE+ F ++Y+T + +LA S+ L+ QVKIWFQN
Sbjct: 152 KRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKIWFQN 200
>X52810-1|CAB57215.1| 67|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-1 gene, unknown homeobox. ).
Length = 67
Score = 49.6 bits (113), Expect = 7e-07
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R ++ Q + LE +F SRY+++ + LA+ L LSE QVKIWFQN
Sbjct: 5 RTAFTYEQLVALENKFKTSRYLSVVERLNLAIQLQLSETQVKIWFQN 51
>U55376-2|AAA98004.1| 132|Caenorhabditis elegans C.elegans
homeobox protein 1 protein.
Length = 132
Score = 49.6 bits (113), Expect = 7e-07
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R ++ Q + LE +F SRY+++ + LA+ L LSE QVKIWFQN
Sbjct: 5 RTAFTYEQLVALENKFKTSRYLSVVERLNLAIQLQLSETQVKIWFQN 51
>U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal lineage
specificationprotein 2 protein.
Length = 341
Score = 49.2 bits (112), Expect = 1e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 8 KDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K K R V+S Q +LE F RY++ + ++ LA L L+E QVKIWFQN
Sbjct: 201 KKKTRTVFSRSQVSQLEMMFECKRYLSSQERSNLAQKLHLTETQVKIWFQN 251
>AY246429-1|AAO91836.1| 209|Caenorhabditis elegans homeodomain
protein CEH-2 protein.
Length = 209
Score = 49.2 bits (112), Expect = 1e-06
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R + R +S Q ++LEK F + Y+ + +LA L L+E QVK+WFQN
Sbjct: 124 RKNKRIRTAFSASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTETQVKVWFQN 176
>AY246428-1|AAO91835.1| 209|Caenorhabditis elegans homeodomain
protein CEH-2 protein.
Length = 209
Score = 49.2 bits (112), Expect = 1e-06
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R + R +S Q ++LEK F + Y+ + +LA L L+E QVK+WFQN
Sbjct: 124 RKNKRIRTAFSASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTETQVKVWFQN 176
>AL033514-3|CAC70124.1| 218|Caenorhabditis elegans Hypothetical
protein Y75B8A.2b protein.
Length = 218
Score = 49.2 bits (112), Expect = 1e-06
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K R Y Q LE E+ ++Y+T +R++EL+ L L E+QVK+WFQN
Sbjct: 139 KKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQN 187
>AF172090-1|AAD48874.1| 218|Caenorhabditis elegans homeodomain
protein NOB-1A protein.
Length = 218
Score = 49.2 bits (112), Expect = 1e-06
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K R Y Q LE E+ ++Y+T +R++EL+ L L E+QVK+WFQN
Sbjct: 139 KKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQN 187
>AF003137-4|AAB93639.2| 209|Caenorhabditis elegans C.elegans
homeobox protein 2 protein.
Length = 209
Score = 49.2 bits (112), Expect = 1e-06
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R + R +S Q ++LEK F + Y+ + +LA L L+E QVK+WFQN
Sbjct: 124 RKNKRIRTAFSASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTETQVKVWFQN 176
>Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical
protein F46F3.1 protein.
Length = 263
Score = 48.8 bits (111), Expect = 1e-06
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 7 TKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
++ K RV++S Q LE++F +RY++ + LA S+ LS QVKIWFQN
Sbjct: 97 SRRKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQN 148
>Z73974-7|CAL90892.1| 283|Caenorhabditis elegans Hypothetical
protein F29F11.5c protein.
Length = 283
Score = 48.8 bits (111), Expect = 1e-06
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R K K RV+++ Q ELE+ F +Y++ + LA+ + L+ QVKIWFQN
Sbjct: 124 RKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKIWFQN 176
>Z73974-6|CAL90891.1| 215|Caenorhabditis elegans Hypothetical
protein F29F11.5b protein.
Length = 215
Score = 48.8 bits (111), Expect = 1e-06
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R K K RV+++ Q ELE+ F +Y++ + LA+ + L+ QVKIWFQN
Sbjct: 56 RKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKIWFQN 108
>Z73974-5|CAA98272.1| 346|Caenorhabditis elegans Hypothetical
protein F29F11.5a protein.
Length = 346
Score = 48.8 bits (111), Expect = 1e-06
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R K K RV+++ Q ELE+ F +Y++ + LA+ + L+ QVKIWFQN
Sbjct: 187 RKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKIWFQN 239
>U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeobox
protein 30 protein.
Length = 299
Score = 48.8 bits (111), Expect = 1e-06
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K R +++D Q ELE F +Y++++ + +LA +GL++ QVK W+QN
Sbjct: 159 KARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQN 207
>U10081-1|AAA20841.1| 346|Caenorhabditis elegans CEH-22
homeoprotein protein.
Length = 346
Score = 48.8 bits (111), Expect = 1e-06
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R K K RV+++ Q ELE+ F +Y++ + LA+ + L+ QVKIWFQN
Sbjct: 187 RKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKIWFQN 239
>U10080-1|AAA20840.1| 346|Caenorhabditis elegans CEH-22
homeoprotein protein.
Length = 346
Score = 48.8 bits (111), Expect = 1e-06
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R K K RV+++ Q ELE+ F +Y++ + LA+ + L+ QVKIWFQN
Sbjct: 187 RKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKIWFQN 239
>Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical
protein M142.4 protein.
Length = 247
Score = 47.2 bits (107), Expect = 4e-06
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+YR +S Q LE+EF Y++ + + ELA L L E +K+WFQN
Sbjct: 70 RYRTAFSREQIGRLEREFAKENYVSRKTRGELAAELNLPEGTIKVWFQN 118
>X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein.
Length = 263
Score = 47.2 bits (107), Expect = 4e-06
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+YR +S Q LE+EF Y++ + + ELA L L E +K+WFQN
Sbjct: 86 RYRTAFSREQIGRLEREFAKENYVSRKTRGELAAELNLPEGTIKVWFQN 134
>U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective pharynx
development protein2 protein.
Length = 225
Score = 47.2 bits (107), Expect = 4e-06
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 1 MSRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
MS+ + + ++ +++ Q LE +F +Y++ + + +LA SL LSERQVK WFQN
Sbjct: 128 MSKSPQKRKGGQIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQN 185
>M72149-1|AAA28063.1| 60|Caenorhabditis elegans ceh-15 protein.
Length = 60
Score = 47.2 bits (107), Expect = 4e-06
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQ 51
+ R Y+ +Q LELEKEFH +Y+T +R+ E+A SL L+ERQ
Sbjct: 3 RQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQ 44
>AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein.
Length = 170
Score = 47.2 bits (107), Expect = 4e-06
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 1 MSRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
MS+ + + ++ +++ Q LE +F +Y++ + + +LA SL LSERQVK WFQN
Sbjct: 73 MSKSPQKRKGGQIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQN 130
>AL033514-2|CAA22093.2| 233|Caenorhabditis elegans Hypothetical
protein Y75B8A.2a protein.
Length = 233
Score = 46.8 bits (106), Expect = 5e-06
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQ 57
K R Y Q LE E+ ++Y+T +R++EL+ L L E+QVK+WFQ
Sbjct: 164 KKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQ 211
>AF172091-1|AAD48875.1| 233|Caenorhabditis elegans NOB-1B protein
protein.
Length = 233
Score = 46.8 bits (106), Expect = 5e-06
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQ 57
K R Y Q LE E+ ++Y+T +R++EL+ L L E+QVK+WFQ
Sbjct: 164 KKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQ 211
>X17075-1|CAA34927.1| 75|Caenorhabditis elegans ceh-11 protein.
Length = 75
Score = 46.0 bits (104), Expect = 9e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K R Y +Q LE +F S Y++ +++ EL + L++RQ+KIWFQN
Sbjct: 4 KGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKIWFQN 52
>L19247-1|AAC37166.1| 223|Caenorhabditis elegans homeobox protein
protein.
Length = 223
Score = 46.0 bits (104), Expect = 9e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K R Y +Q LE +F S Y++ +++ EL + L++RQ+KIWFQN
Sbjct: 114 KGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKIWFQN 162
>L15201-6|AAP82660.1| 222|Caenorhabditis elegans Egg laying
defective protein 5,isoform c protein.
Length = 222
Score = 46.0 bits (104), Expect = 9e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K R Y +Q LE +F S Y++ +++ EL + L++RQ+KIWFQN
Sbjct: 113 KGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKIWFQN 161
>L15201-5|AAA27943.2| 219|Caenorhabditis elegans Egg laying
defective protein 5,isoform a protein.
Length = 219
Score = 46.0 bits (104), Expect = 9e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K R Y +Q LE +F S Y++ +++ EL + L++RQ+KIWFQN
Sbjct: 110 KGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKIWFQN 158
>L15201-4|AAN84878.1| 223|Caenorhabditis elegans Egg laying
defective protein 5,isoform b protein.
Length = 223
Score = 46.0 bits (104), Expect = 9e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K R Y +Q LE +F S Y++ +++ EL + L++RQ+KIWFQN
Sbjct: 114 KGRQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKIWFQN 162
>L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protein
protein.
Length = 303
Score = 45.6 bits (103), Expect = 1e-05
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
SR+ K R +Y Q +LE F Y+ + LA LGLS QV+IWFQN
Sbjct: 203 SRRAANHRKARTIYGTTQTQQLEDMFKGQMYVVGAERENLAQRLGLSPSQVRIWFQN 259
>L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeobox
protein 23 protein.
Length = 305
Score = 45.6 bits (103), Expect = 1e-05
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
SR+ K R +Y Q +LE F Y+ + LA LGLS QV+IWFQN
Sbjct: 205 SRRAANHRKARTIYGTTQTQQLEDMFKGQMYVVGAERENLAQRLGLSPSQVRIWFQN 261
>Z68008-6|CAA92001.1| 362|Caenorhabditis elegans Hypothetical
protein R08B4.2 protein.
Length = 362
Score = 44.4 bits (100), Expect = 3e-05
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R + +YR +S Q ELEK F + Y + + ELA + L+E +V++WFQN
Sbjct: 115 RKQRRYRTTFSAFQLDELEKVFARTHYPDVFTREELATRVQLTEARVQVWFQN 167
>X52812-1|CAB57216.1| 66|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-10 gene, unknown homeobox. ).
Length = 66
Score = 42.7 bits (96), Expect = 8e-05
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R K ++R +++ +Q ELEK F S Y I + LA L E ++++WFQN
Sbjct: 5 RKKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQVWFQN 57
>U50184-2|AAB93323.1| 344|Caenorhabditis elegans C.elegans homeobox
protein 10 protein.
Length = 344
Score = 42.7 bits (96), Expect = 8e-05
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R K ++R +++ +Q ELEK F S Y I + LA L E ++++WFQN
Sbjct: 134 RKKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQVWFQN 186
>U19995-1|AAA93063.1| 344|Caenorhabditis elegans ceh-10 protein.
Length = 344
Score = 42.7 bits (96), Expect = 8e-05
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R K ++R +++ +Q ELEK F S Y I + LA L E ++++WFQN
Sbjct: 134 RKKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQVWFQN 186
>AC006835-2|AAF40014.1| 229|Caenorhabditis elegans Hypothetical
protein ZK993.1 protein.
Length = 229
Score = 42.7 bits (96), Expect = 8e-05
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 5 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+R K ++R ++S+ Q LE F + Y + ELAV L E +V++WF+N
Sbjct: 106 SRRKRRHRTIFSEEQLNILETTFSTTHYPDATTREELAVQCSLKEERVEVWFKN 159
>Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical
protein B0564.10b protein.
Length = 323
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K + + R ++ HQ ELE F +RY + + E+AV + L+E +V++WF+N
Sbjct: 108 KIQKPRRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRVWFKN 162
>Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical
protein B0564.10a protein.
Length = 319
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K + + R ++ HQ ELE F +RY + + E+AV + L+E +V++WF+N
Sbjct: 108 KIQKPRRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRVWFKN 162
>U41545-3|ABN43093.1| 152|Caenorhabditis elegans Hypothetical
protein C02F12.10 protein.
Length = 152
Score = 42.3 bits (95), Expect = 1e-04
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K + R ++ Q LE EF + YI R+ ELA ++ L+E QVK WFQN
Sbjct: 37 KRSNRPTKRTTFTSEQVTLLELEFAKNEYICKDRRGELAQTIELTECQVKTWFQN 91
>L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain
protein protein.
Length = 319
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K + + R ++ HQ ELE F +RY + + E+AV + L+E +V++WF+N
Sbjct: 108 KIQKPRRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRVWFKN 162
>Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical
protein R06F6.6 protein.
Length = 416
Score = 41.9 bits (94), Expect = 1e-04
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ K+R K R +S Q LE E+ Y+ ++ LA SL LSE QVK WFQN
Sbjct: 127 NEKSRRK---RTTFSPEQATRLEAEYIGDSYMAREKRHLLAQSLKLSENQVKTWFQN 180
>AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein.
Length = 237
Score = 41.5 bits (93), Expect = 2e-04
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R + + R ++ Q ELE+ F + Y I + E+A+ + L+E +V++WFQN
Sbjct: 147 RKQRRIRTTFTSGQLKELERSFCETHYPDIYTREEIAMRIDLTEARVQVWFQN 199
>AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans
homeobox protein 17 protein.
Length = 237
Score = 41.5 bits (93), Expect = 2e-04
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R + + R ++ Q ELE+ F + Y I + E+A+ + L+E +V++WFQN
Sbjct: 147 RKQRRIRTTFTSGQLKELERSFCETHYPDIYTREEIAMRIDLTEARVQVWFQN 199
>Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 5 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
T + ++R ++ Q EL+ F S Y I + ELA L+E ++++WFQN
Sbjct: 82 TPARRRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQVWFQN 135
>Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 5 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
T + ++R ++ Q EL+ F S Y I + ELA L+E ++++WFQN
Sbjct: 82 TPARRRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQVWFQN 135
>AL132853-1|CAB60440.1| 234|Caenorhabditis elegans Hypothetical
protein Y80D3A.3 protein.
Length = 234
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R +SD Q L F I + + +L +GLS Q+KIWFQN
Sbjct: 151 RTPFSDSQLYALRTRFEQCDTIKVDERRKLGAVIGLSPEQIKIWFQN 197
>Z66494-8|CAA91264.1| 84|Caenorhabditis elegans Hypothetical
protein C34C6.8 protein.
Length = 84
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R ++ Q LE F S+Y+ + LA L L E QVKIWFQN
Sbjct: 27 RTTFTVEQLYLLEMYFAQSQYVGCDERERLARILSLDEYQVKIWFQN 73
>U64600-5|AAK39202.2| 223|Caenorhabditis elegans C.elegans
homeobox protein 31 protein.
Length = 223
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQV 52
S+K R K R +++D Q ELE F +Y++++ + ELA +GL++ Q+
Sbjct: 35 SKKAR---KARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQI 82
>AF091459-1|AAC36745.1| 84|Caenorhabditis elegans homeodomain
protein CEH-7 protein.
Length = 84
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R ++ Q LE F S+Y+ + LA L L E QVKIWFQN
Sbjct: 27 RTTFTVEQLYLLEMYFAQSQYVGCDERERLARILSLDEYQVKIWFQN 73
>U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical
protein T13C5.4 protein.
Length = 220
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 8 KDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
K + R+ + +Q E+EK F ++Y + +LA + L E +V+IWFQN
Sbjct: 44 KKRNRITFDANQIDEMEKVFAENQYPDTMSREKLANKIQLHEERVQIWFQN 94
>Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical
protein F26C11.2 protein.
Length = 252
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R +S Q ELE F S Y + + LA+ L L E +V++WFQN
Sbjct: 92 RTNFSGWQLEELESAFEASHYPDVFMREALAMRLDLLESRVQVWFQN 138
>X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein.
Length = 184
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R +S Q ELE F S Y + + LA+ L L E +V++WFQN
Sbjct: 56 RTNFSGWQLEELESAFEASHYPDVFMREALAMRLDLLESRVQVWFQN 102
>Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical
protein F14F3.1c protein.
Length = 296
Score = 35.5 bits (78), Expect = 0.013
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R R + R ++ Q LEKEF + Y + + LA + L E ++++WF N
Sbjct: 53 RLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSN 108
>Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical
protein F14F3.1b protein.
Length = 269
Score = 35.5 bits (78), Expect = 0.013
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R R + R ++ Q LEKEF + Y + + LA + L E ++++WF N
Sbjct: 26 RLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSN 81
>Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical
protein F14F3.1a protein.
Length = 455
Score = 35.5 bits (78), Expect = 0.013
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R R + R ++ Q LEKEF + Y + + LA + L E ++++WF N
Sbjct: 212 RLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSN 267
>U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-18
protein.
Length = 261
Score = 35.5 bits (78), Expect = 0.013
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R R + R ++ Q LEKEF + Y + + LA + L E ++++WF N
Sbjct: 18 RLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSN 73
>U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable
abnormal-3 protein.
Length = 455
Score = 35.5 bits (78), Expect = 0.013
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R R + R ++ Q LEKEF + Y + + LA + L E ++++WF N
Sbjct: 212 RLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSN 267
>U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein.
Length = 296
Score = 35.5 bits (78), Expect = 0.013
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R R + R ++ Q LEKEF + Y + + LA + L E ++++WF N
Sbjct: 53 RLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSN 108
>U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein.
Length = 284
Score = 35.5 bits (78), Expect = 0.013
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R R + R ++ Q LEKEF + Y + + LA + L E ++++WF N
Sbjct: 41 RLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSN 96
>U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain family
protein 6 protein.
Length = 287
Score = 34.7 bits (76), Expect = 0.022
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+T + R + + QR + + F S + + + +LA GLS R V++WFQN
Sbjct: 161 KTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQN 213
>AL132858-4|CAB60479.2| 338|Caenorhabditis elegans Hypothetical
protein Y113G7A.6b protein.
Length = 338
Score = 33.1 bits (72), Expect = 0.067
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 5 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+R + + R ++ +Q LE F +RY I + ++A + L E +V++WF+N
Sbjct: 143 SRKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKN 196
>AL132858-3|CAB60478.2| 391|Caenorhabditis elegans Hypothetical
protein Y113G7A.6a protein.
Length = 391
Score = 33.1 bits (72), Expect = 0.067
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 5 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+R + + R ++ +Q LE F +RY I + ++A + L E +V++WF+N
Sbjct: 196 SRKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKN 249
>AF381629-1|AAL12002.1| 223|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 223
Score = 33.1 bits (72), Expect = 0.067
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 5 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+R + + R ++ +Q LE F +RY I + ++A + L E +V++WF+N
Sbjct: 159 SRKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKN 212
>AF381628-1|AAL12001.1| 372|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 372
Score = 33.1 bits (72), Expect = 0.067
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 5 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+R + + R ++ +Q LE F +RY I + ++A + L E +V++WF+N
Sbjct: 177 SRKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKN 230
>AF381627-1|AAL12000.1| 332|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 332
Score = 33.1 bits (72), Expect = 0.067
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 5 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+R + + R ++ +Q LE F +RY I + ++A + L E +V++WF+N
Sbjct: 137 SRKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKN 190
>Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical
protein ZK265.4 protein.
Length = 276
Score = 32.7 bits (71), Expect = 0.088
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 2 SRKTRTK--DKY----RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIW 55
SRK R K DK R ++ Q LE F + Y + + LA + L E +V++W
Sbjct: 48 SRKNRDKIADKKQRRNRTTFTTFQLHALEAAFDKTHYPDVYARETLAAKVQLPEVRVQVW 107
Query: 56 FQN 58
FQN
Sbjct: 108 FQN 110
>AF038608-13|AAC25819.1| 253|Caenorhabditis elegans Hypothetical
protein C09G12.1 protein.
Length = 253
Score = 32.7 bits (71), Expect = 0.088
Identities = 13/49 (26%), Positives = 29/49 (59%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ R +S++Q LE+ F +Y ++++ L L+E ++++WF+N
Sbjct: 93 RLRTAFSENQLELLEEAFLKCQYPDVQQRETLGKQTELAEARIQVWFKN 141
>Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical
protein C37E2.5 protein.
Length = 278
Score = 32.3 bits (70), Expect = 0.12
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R + R YS Q LE F+ ++Y + + +A + L E ++++WF+N
Sbjct: 39 RKNRRERTTYSRQQLEILETLFNETQYPDVFARERVADQIRLQESRIQVWFKN 91
>AL031620-3|CAA20928.1| 310|Caenorhabditis elegans Hypothetical
protein C18B12.3 protein.
Length = 310
Score = 31.9 bits (69), Expect = 0.15
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 10 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
++R +++ Q LE F S Y + K +A L + E ++ +WFQN
Sbjct: 182 RFRTNFTELQSTFLEDSFKESHYPDHKAKKYMADFLKIPEDRITVWFQN 230
>Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical
protein F01D4.6b protein.
Length = 313
Score = 30.3 bits (65), Expect = 0.47
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 38 KAELAVSLGLSERQVKIWFQN 58
+A+LA+ GLS R +++WFQN
Sbjct: 239 RAKLALETGLSMRVIQVWFQN 259
>Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical
protein F01D4.6a protein.
Length = 321
Score = 30.3 bits (65), Expect = 0.47
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 38 KAELAVSLGLSERQVKIWFQN 58
+A+LA+ GLS R +++WFQN
Sbjct: 247 RAKLALETGLSMRVIQVWFQN 267
>U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative
transcription factor LIM-4 protein.
Length = 355
Score = 30.3 bits (65), Expect = 0.47
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S+K +TK + R +++ Q L+ F+ ++A GLS+R ++WFQN
Sbjct: 234 SQKAKTK-RVRTTFAEDQLSVLQTYFNRDSNPDGADLEKIASMTGLSKRVTQVWFQN 289
>U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain family
protein 4 protein.
Length = 355
Score = 30.3 bits (65), Expect = 0.47
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S+K +TK + R +++ Q L+ F+ ++A GLS+R ++WFQN
Sbjct: 234 SQKAKTK-RVRTTFAEDQLSVLQTYFNRDSNPDGADLEKIASMTGLSKRVTQVWFQN 289
>M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein (
C.elegans mec-3 geneencoding differentiation of the six
touch receptor neurons,complete cds. ).
Length = 313
Score = 30.3 bits (65), Expect = 0.47
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 38 KAELAVSLGLSERQVKIWFQN 58
+A+LA+ GLS R +++WFQN
Sbjct: 239 RAKLALETGLSMRVIQVWFQN 259
>L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein
protein.
Length = 321
Score = 30.3 bits (65), Expect = 0.47
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 38 KAELAVSLGLSERQVKIWFQN 58
+A+LA+ GLS R +++WFQN
Sbjct: 247 RAKLALETGLSMRVIQVWFQN 267
>Z95623-1|CAB09133.1| 314|Caenorhabditis elegans Hypothetical
protein Y53C12C.1 protein.
Length = 314
Score = 29.9 bits (64), Expect = 0.62
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R +++ Q LE+ F Y + +A+L L E ++++WF N
Sbjct: 207 RSTFTNEQLQSLEEVFLRDPYPSPNERADLVKRTNLPEARIQVWFSN 253
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 29.5 bits (63), Expect = 0.82
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 9 DKYRVVYS--DHQRLELEKEF-HYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
D +VYS D R L++ F + S Y T +K E++ + GL Q+ WF+N
Sbjct: 216 DGEEIVYSFKDSSRKFLKQFFRNVSEYPTQEQKREISRATGLKIVQISNWFKN 268
>Z81124-12|CAI46579.2| 489|Caenorhabditis elegans Hypothetical
protein T21B4.17 protein.
Length = 489
Score = 29.5 bits (63), Expect = 0.82
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQ 57
LE F +Y+T EL GL+E+Q+ W++
Sbjct: 85 LENAFKTHQYVTRELTKELTEKAGLNEKQIWFWYR 119
>U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein.
Length = 452
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+K + + R V +++Q L + + K L GLS R +++WFQN
Sbjct: 260 KKDKQATRVRTVLNENQLKILRDCYSINSRPDATLKERLVEMTGLSARVIRVWFQN 315
>U41550-4|AAP31434.2| 514|Caenorhabditis elegans Hypothetical
protein R04A9.5 protein.
Length = 514
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWF 56
L K F + +R++ ++A LGLSERQV+ +F
Sbjct: 406 LNKYFAKNNKPGVRQREKIAKKLGLSERQVRNYF 439
>AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain
family protein 7 protein.
Length = 452
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+K + + R V +++Q L + + K L GLS R +++WFQN
Sbjct: 260 KKDKQATRVRTVLNENQLKILRDCYSINSRPDATLKERLVEMTGLSARVIRVWFQN 315
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R +D Q L+ F + + + + +A +G+++R V++WFQN
Sbjct: 227 RSFLNDSQVAVLQNHFKRNPFPSKYELSAVAEQIGVNKRVVQVWFQN 273
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R +D Q L+ F + + + + +A +G+++R V++WFQN
Sbjct: 227 RSFLNDSQVAVLQNHFKRNPFPSKYELSAVAEQIGVNKRVVQVWFQN 273
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R +D Q L+ F + + + + +A +G+++R V++WFQN
Sbjct: 227 RSFLNDSQVAVLQNHFKRNPFPSKYELSAVAEQIGVNKRVVQVWFQN 273
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S R+K + R + HQ ++ F + + +LA L++R +++WFQN
Sbjct: 287 SGSQRSK-RMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLTKRVLQVWFQN 342
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S R+K + R + HQ ++ F + + +LA L++R +++WFQN
Sbjct: 287 SGSQRSK-RMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLTKRVLQVWFQN 342
>Z49908-6|CAA90100.3| 327|Caenorhabditis elegans Hypothetical
protein C07E3.6 protein.
Length = 327
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITI--RRKAELAVSLGLSERQVKIWFQN 58
R+VYS + LEK + R++ + +L + ++K+WFQN
Sbjct: 253 RIVYSTQELNILEKYYEEDPNACADPRKRETMCKTLSIDYHRLKVWFQN 301
>U80839-15|AAB37911.1| 430|Caenorhabditis elegans Hypothetical
protein ZC204.2 protein.
Length = 430
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWF 56
LE F ++ T + AEL ++ L + Q+++WF
Sbjct: 314 LEAAFKRCQFATQQTMAELKLNTSLQKSQIRLWF 347
>U70857-9|AAB09174.1| 261|Caenorhabditis elegans C.elegans homeobox
protein 33 protein.
Length = 261
Score = 27.9 bits (59), Expect = 2.5
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 15 YSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ D R+ L + + Y + R K ELA L+ QV WF+N
Sbjct: 140 FRDKSRVLLRDWYCRNSYPSPREKRELAEKTHLTVTQVSNWFKN 183
>Z48783-8|CAA88702.2| 308|Caenorhabditis elegans Hypothetical
protein F27E5.2 protein.
Length = 308
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R ++ Q LE F Y + ++ GLSE ++ WF N
Sbjct: 191 RTSFTAEQLDVLENAFRADTYPHANARESISKETGLSEEKIMTWFSN 237
>Z48582-6|CAA88468.2| 308|Caenorhabditis elegans Hypothetical
protein F27E5.2 protein.
Length = 308
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R ++ Q LE F Y + ++ GLSE ++ WF N
Sbjct: 191 RTSFTAEQLDVLENAFRADTYPHANARESISKETGLSEEKIMTWFSN 237
>AF025454-2|AAC71153.2| 186|Caenorhabditis elegans Hypothetical
protein F34D6.2 protein.
Length = 186
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 14 VYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWF 56
VY+ Q L + F + +++ +LA GL+ QV WF
Sbjct: 79 VYTPEQHAVLREGFEHCSWLSKSTLNKLASESGLTRTQVSTWF 121
>Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical
protein ZC247.3 protein.
Length = 405
Score = 27.1 bits (57), Expect = 4.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 38 KAELAVSLGLSERQVKIWFQN 58
+ +LA GL+ R +++WFQN
Sbjct: 271 REQLAAETGLNMRVIQVWFQN 291
>Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical
protein W05E10.3 protein.
Length = 439
Score = 27.1 bits (57), Expect = 4.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 15 YSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ + R L + + Y +K ELA + GL++ QV WF+N
Sbjct: 192 FKERTRSLLREWYLKDPYPNPPKKKELANATGLTQMQVGNWFKN 235
>X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein
protein.
Length = 382
Score = 27.1 bits (57), Expect = 4.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 38 KAELAVSLGLSERQVKIWFQN 58
+ +LA GL+ R +++WFQN
Sbjct: 248 REQLAAETGLNMRVIQVWFQN 268
>AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein.
Length = 439
Score = 27.1 bits (57), Expect = 4.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 15 YSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+ + R L + + Y +K ELA + GL++ QV WF+N
Sbjct: 192 FKERTRSLLREWYLKDPYPNPPKKKELANATGLTQMQVGNWFKN 235
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 26.6 bits (56), Expect = 5.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWF 56
L+ F ++I K ELA L L+ QVK WF
Sbjct: 120 LDDVFINCQFINEETKKELAKELDLTTTQVKDWF 153
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 26.6 bits (56), Expect = 5.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWF 56
L+ F ++I K ELA L L+ QVK WF
Sbjct: 118 LDDVFINCQFINEETKKELAKELDLTTTQVKDWF 151
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 26.6 bits (56), Expect = 5.8
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 12 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R ++D Q L++ F Y L+ L LS R + +WFQN
Sbjct: 1043 RTRFTDFQLRTLQQFFDKQAYPKDDDLEALSKKLQLSPRVIVVWFQN 1089
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 26.2 bits (55), Expect = 7.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 38 KAELAVSLGLSERQVKIWFQN 58
+ +LA GL R V++WFQN
Sbjct: 210 REQLASETGLDMRVVQVWFQN 230
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 26.2 bits (55), Expect = 7.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 38 KAELAVSLGLSERQVKIWFQN 58
+ +LA GL R V++WFQN
Sbjct: 210 REQLASETGLDMRVVQVWFQN 230
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.134 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,398,344
Number of Sequences: 27539
Number of extensions: 36412
Number of successful extensions: 259
Number of sequences better than 10.0: 136
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 123
Number of HSP's gapped (non-prelim): 140
length of query: 132
length of database: 12,573,161
effective HSP length: 74
effective length of query: 58
effective length of database: 10,535,275
effective search space: 611045950
effective search space used: 611045950
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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