Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001180-TA|BGIBMGA001180-PA|IPR001356|Homeobox,
IPR000047|Helix-turn-helix motif, lambda-like repressor,
IPR009057|Homeodomain-like
(132 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g46680.1 68415.m05825 homeobox-leucine zipper protein 7 (HB-7... 44 4e-05
At3g61890.1 68416.m06951 homeobox-leucine zipper protein 12 (HB-... 42 1e-04
At1g26960.1 68414.m03287 homeobox-leucine zipper protein, putati... 42 2e-04
At5g65310.1 68418.m08216 homeobox-leucine zipper protein 5 (HB-5... 40 4e-04
At5g15150.1 68418.m01775 homeobox-leucine zipper protein 7 (HAT7... 40 4e-04
At2g22430.1 68415.m02660 homeobox-leucine zipper protein 6 (HB-6... 40 4e-04
At4g40060.1 68417.m05672 homeobox-leucine zipper protein 16 (HB-... 40 5e-04
At3g01470.1 68416.m00071 homeobox-leucine zipper protein 5 (HAT5... 40 5e-04
At1g69780.1 68414.m08029 homeobox-leucine zipper protein 13 (HB-... 40 5e-04
At3g01220.1 68416.m00028 homeobox-leucine zipper protein, putati... 40 7e-04
At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putati... 40 7e-04
At1g17920.1 68414.m02218 homeobox-leucine zipper family protein ... 40 7e-04
At2g18550.1 68415.m02161 homeobox-leucine zipper family protein ... 38 0.002
At5g53980.1 68418.m06715 homeobox-leucine zipper family protein ... 38 0.003
At4g36740.1 68417.m05213 homeobox-leucine zipper family protein ... 38 0.003
At5g52170.1 68418.m06476 homeobox-leucine zipper family protein ... 37 0.005
At4g17460.1 68417.m02612 homeobox-leucine zipper protein 1 (HAT1... 37 0.005
At3g60390.1 68416.m06754 homeobox-leucine zipper protein 3 (HAT3... 36 0.007
At2g44910.1 68415.m05590 homeobox-leucine zipper protein 4 (HB-4... 36 0.009
At1g34650.1 68414.m04309 homeobox-leucine zipper family protein ... 36 0.009
At5g66700.1 68418.m08408 homeobox-leucine zipper family protein ... 36 0.012
At5g46880.1 68418.m05777 homeobox-leucine zipper family protein ... 36 0.012
At5g03790.1 68418.m00346 homeobox-leucine zipper family protein ... 36 0.012
At4g16780.1 68417.m02535 homeobox-leucine zipper protein 4 (HAT4... 36 0.012
At1g79840.1 68414.m09327 homeobox-leucine zipper protein 10 (HB-... 35 0.016
At1g73360.1 68414.m08491 homeobox-leucine zipper family protein ... 35 0.016
At1g28420.1 68414.m03494 homeobox transcription factor, putative... 35 0.016
At5g47370.1 68418.m05838 homeobox-leucine zipper protein 2 (HAT2... 35 0.021
At5g06710.1 68418.m00758 homeobox-leucine zipper protein 14 (HAT... 34 0.027
At1g27050.1 68414.m03298 homeobox-leucine zipper family protein ... 33 0.048
At4g04890.1 68417.m00712 homeobox-leucine zipper protein protode... 33 0.083
At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identica... 33 0.083
At4g37790.1 68417.m05348 homeobox-leucine zipper protein 22 (HAT... 32 0.11
At3g61150.1 68416.m06843 homeobox-leucine zipper family protein ... 32 0.11
At2g36610.1 68415.m04488 homeobox-leucine zipper family protein ... 32 0.15
At2g22800.1 68415.m02706 homeobox-leucine zipper protein 9 (HAT9... 32 0.15
At2g01430.1 68415.m00066 homeobox-leucine zipper protein 17 (HB-... 32 0.15
At4g21750.1 68417.m03148 L1 specific homeobox gene (ML1) / ovule... 31 0.19
At4g03250.1 68417.m00444 homeobox-leucine zipper family protein ... 31 0.19
At2g32370.1 68415.m03956 homeobox-leucine zipper family protein ... 31 0.19
At4g17710.1 68417.m02645 homeobox-leucine zipper family protein ... 31 0.34
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 30 0.44
At4g25530.1 68417.m03681 homeodomain protein (FWA) identical to ... 30 0.59
At1g05230.2 68414.m00529 homeobox-leucine zipper family protein ... 28 2.4
At1g05230.1 68414.m00528 homeobox-leucine zipper family protein ... 28 2.4
At5g60690.1 68418.m07616 homeodomain-leucine zipper protein Revo... 27 3.1
At1g52150.2 68414.m05885 homeobox-leucine zipper family protein ... 27 3.1
At1g52150.1 68414.m05884 homeobox-leucine zipper family protein ... 27 3.1
At3g43150.1 68416.m04546 hypothetical protein 27 5.5
At3g03260.1 68416.m00322 homeobox-leucine zipper family protein ... 27 5.5
At5g65200.1 68418.m08200 armadillo/beta-catenin repeat family pr... 26 9.6
>At2g46680.1 68415.m05825 homeobox-leucine zipper protein 7 (HB-7)
/ HD-ZIP transcription factor 7 identical to
homeobox-leucine zipper protein ATHB-7 (HD-ZIP protein
ATHB-7) (SP:P46897) [Arabidopsis thaliana];
Length = 258
Score = 43.6 bits (98), Expect = 4e-05
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 1 MSRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
M + K+ R +SD Q LE F + R+K +LA LGL RQV IWFQN
Sbjct: 23 MKKSNHNKNNQRR-FSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQN 79
>At3g61890.1 68416.m06951 homeobox-leucine zipper protein 12
(HB-12) / HD-ZIP transcription factor 12 identical to
homeobox-leucine zipper protein ATHB-12 (GI:6899887)
[Arabidopsis thaliana]
Length = 235
Score = 42.3 bits (95), Expect = 1e-04
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 1 MSRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
M++K K + +S+ Q LE F + R+K ++A LGL RQV IWFQN
Sbjct: 20 MNKKKMKKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQN 77
>At1g26960.1 68414.m03287 homeobox-leucine zipper protein, putative
/ HD-ZIP transcription factor, putative similar to
homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7)
(HD-ZIP protein ATHB-3 (SP:Q00466| [Arabidopsis
thaliana]; similar to Helianthus annuus gi|349379, and
carrot, gi|1435022. Contains Homeobox domain motif
Length = 255
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LEK+F + RK ELA +LGL RQ+ IWFQN
Sbjct: 83 LEKDFELGNKLESDRKLELARALGLQPRQIAIWFQN 118
>At5g65310.1 68418.m08216 homeobox-leucine zipper protein 5 (HB-5) /
HD-ZIP transcription factor 5 identical to
homeobox-leucine zipper protein ATHB-5 (HD-ZIP protein
ATHB-5) (SP:P46667) [Arabidopsis thaliana]
Length = 312
Score = 40.3 bits (90), Expect = 4e-04
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LEK F + RK +LA LGL RQV IWFQN
Sbjct: 84 LEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQN 119
>At5g15150.1 68418.m01775 homeobox-leucine zipper protein 7 (HAT7) /
HD-ZIP protein 7 / HD-ZIP protein (HB-3) identical to
homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7)
(HD-ZIP protein ATHB-3) (SP:Q00466) [Arabidopsis
thaliana]
Length = 314
Score = 40.3 bits (90), Expect = 4e-04
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LEK F + RK +LA +LGL RQ+ IWFQN
Sbjct: 127 LEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQN 162
>At2g22430.1 68415.m02660 homeobox-leucine zipper protein 6 (HB-6) /
HD-ZIP transcription factor 6 identical to
homeobox-leucine zipper protein ATHB-6 (HD-ZIP protein
ATHB-6) (SP:P46668) [Arabidopsis thaliana]
Length = 311
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S +Q LEK F + RK +LA LGL RQV +WFQN
Sbjct: 67 SINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQN 109
>At4g40060.1 68417.m05672 homeobox-leucine zipper protein 16 (HB-16)
/ HD-ZIP transcription factor 16 identical to
homeodomain leucine-zipper protein ATHB-16 (GP:5668909|)
{Arabidopsis thaliana}
Length = 294
Score = 39.9 bits (89), Expect = 5e-04
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LEK F + RK +LA LGL RQV +WFQN
Sbjct: 71 LEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQN 106
>At3g01470.1 68416.m00071 homeobox-leucine zipper protein 5 (HAT5) /
HD-ZIP protein 5 / HD-ZIP protein (HB-1) identical to
homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5)
(HD-ZIP protein ATHB-1) GB:Q02283 [Arabidopsis thaliana]
Length = 272
Score = 39.9 bits (89), Expect = 5e-04
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LEK F + RK +LA LGL RQV +WFQN
Sbjct: 80 LEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQN 115
>At1g69780.1 68414.m08029 homeobox-leucine zipper protein 13 (HB-13)
/ HD-ZIP transcription factor 13 identical to homeobox
gene 13 protein (GP:12325190) [Arabidopsis thaliana]
Length = 294
Score = 39.9 bits (89), Expect = 5e-04
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LEK F + RK +LA +LGL RQ+ IWFQN
Sbjct: 97 LEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQN 132
>At3g01220.1 68416.m00028 homeobox-leucine zipper protein, putative
/ HD-ZIP transcription factor, putative similar to
homeobox-leucine zipper protein, HAT7 (GB:Q00466)
[Arabidopsis thaliana]
Length = 286
Score = 39.5 bits (88), Expect = 7e-04
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LEK F + RK +LA +LG+ RQ+ IWFQN
Sbjct: 99 LEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQN 134
>At1g70920.1 68414.m08183 homeobox-leucine zipper protein, putative
/ HD-ZIP transcription factor, putative similar to
homeodomain leucine zipper protein GI:5006851 from
[Oryza sativa]
Length = 206
Score = 39.5 bits (88), Expect = 7e-04
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LE+ F + +T ++K +LA L LS+RQV++WFQN
Sbjct: 81 LEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQN 116
>At1g17920.1 68414.m02218 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar
to A20 (GI:1881536) [Arabidopsis thaliana]; similar to
homeobox protein GI:1173622 from [Phalaenopsis sp.
SM9108]
Length = 687
Score = 39.5 bits (88), Expect = 7e-04
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+K + K ++ ++ HQ LE F+ ++ +++ +L+ LGL+ RQ+K WFQN
Sbjct: 17 KKNKKKKRFHR-HTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQIKFWFQN 71
>At2g18550.1 68415.m02161 homeobox-leucine zipper family protein
similar to CRHB6 (GI:3868839) [Ceratopteris richardii];
contains Pfam PF00046: Homeobox domain
Length = 220
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/43 (46%), Positives = 22/43 (51%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
SD Q LE F + RK LA LGL RQV +WFQN
Sbjct: 66 SDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQN 108
>At5g53980.1 68418.m06715 homeobox-leucine zipper family protein
contains Pfam PF00046: Homeobox domain; similar to
homeobox protein PpHB5 (GI:7415622) [Physcomitrella
patens]
Length = 156
Score = 37.5 bits (83), Expect = 0.003
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 4 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+++ K+K + + D R +LEK F ++ + K +L+ LGL +RQV +WFQN
Sbjct: 5 QSQGKNKKKRLTQDQVR-QLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQN 58
>At4g36740.1 68417.m05213 homeobox-leucine zipper family protein
similar to CRHB7 (GP:3868841) {Ceratopteris richardii}
and to homeotic protein VAHOX1 (PIR:T07734)
[Lycopersicon esculentum]
Length = 217
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/43 (44%), Positives = 22/43 (51%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+D Q LE F + RK LA LGL RQV +WFQN
Sbjct: 61 TDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQN 103
>At5g52170.1 68418.m06476 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
Anthocyaninless2 (ANL2) (GP:5702094) [Arabidopsis
thaliana]; contains Pfam PF00046: Homeobox domain and
Pfam PF01852: START domain
Length = 682
Score = 36.7 bits (81), Expect = 0.005
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+K + K KY ++ +Q ELE F + +++ EL L L +Q+K WFQN
Sbjct: 53 KKKKRKTKYHR-HTSYQIQELESFFKECPHPNEKQRLELGKKLTLESKQIKFWFQN 107
>At4g17460.1 68417.m02612 homeobox-leucine zipper protein 1 (HAT1) /
HD-ZIP protein 1 identical to Homeobox-leucine zipper
protein HAT1 (SP:P46600) [Arabidopsis thaliana]
Length = 282
Score = 36.7 bits (81), Expect = 0.005
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S Q LE F + ++K LA LGL+ RQV++WFQN
Sbjct: 140 SKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQN 182
>At3g60390.1 68416.m06754 homeobox-leucine zipper protein 3 (HAT3) /
HD-ZIP protein 3 identical to Homeobox-leucine zipper
protein HAT3 (SP:P46602) [Arabidopsis thaliana]
Length = 315
Score = 36.3 bits (80), Expect = 0.007
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S Q L LE+ F + ++K LA L L RQV++WFQN
Sbjct: 167 SKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQN 209
>At2g44910.1 68415.m05590 homeobox-leucine zipper protein 4 (HB-4) /
HD-ZIP protein 4 identical to Homeobox-leucine zipper
protein ATHB-4 (HD-ZIP protein ATHB-4) (SP:P92953)
[Arabidopsis thaliana]
Length = 318
Score = 35.9 bits (79), Expect = 0.009
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S Q L LE+ F + ++K LA L L RQV++WFQN
Sbjct: 168 SKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQN 210
>At1g34650.1 68414.m04309 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar
to homeobox 1 (GP:12002853) {Picea abies}; contains
Pfam PF00046: Homeobox domain and Pfam PF01852: START
domain
Length = 708
Score = 35.9 bits (79), Expect = 0.009
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 15 YSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+S+HQ LE FH + ++ +L L L +Q+K WFQN
Sbjct: 23 HSNHQVQRLEAFFHECPHPDDSQRRQLGNELNLKHKQIKFWFQN 66
>At5g66700.1 68418.m08408 homeobox-leucine zipper family protein
similar to Homeobox-leucine zipper protein HAT5 (HD-ZIP
protein 5) (SP:Q02283) [Arabidopsis thaliana]; contains
Pfam PF00046: Homeobox domain
Length = 228
Score = 35.5 bits (78), Expect = 0.012
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+D Q LE F + RK ++A LGL RQV +WFQN
Sbjct: 76 TDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQN 118
>At5g46880.1 68418.m05777 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
HD-Zip homeo domain OCL4 protein GI:8920425 from [Zea
mays]; contains Pfam PF00046: Homeobox domain and Pfam
PF01852: START domain
Length = 820
Score = 35.5 bits (78), Expect = 0.012
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 15 YSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+++ Q E+E F + + +++ L+ LGL RQVK WFQN
Sbjct: 118 HTNRQIQEMEALFKENPHPDDKQRKRLSAELGLKPRQVKFWFQN 161
>At5g03790.1 68418.m00346 homeobox-leucine zipper family protein
similar to homeobox-leucine zipper protein Athb-7
(SP:P46897) [Arabidopsis thaliana]; contains Pfam
PF00046: Homeobox domain
Length = 236
Score = 35.5 bits (78), Expect = 0.012
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 19 QRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
Q LE+ F + RK +L+ LGL RQ+ +WFQN
Sbjct: 86 QLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQN 125
>At4g16780.1 68417.m02535 homeobox-leucine zipper protein 4 (HAT4) /
HD-ZIP protein 4 SP|Q05466|HAT4_ARATH Homeobox-leucine
zipper protein HAT4 (HD-ZIP protein 4) (SP:Q05466)
[Arabidopsis thaliana] (HD-ZIP homeotic protein Athb-2
Length = 284
Score = 35.5 bits (78), Expect = 0.012
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S Q LE+ F + ++K LA LGL RQV++WFQN
Sbjct: 134 SKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQN 176
>At1g79840.1 68414.m09327 homeobox-leucine zipper protein 10 (HB-10)
/ HD-ZIP transcription factor 10 / homeobox protein
(GLABRA2) identical to homeobox protein (GLABRA2)
(homeobox-leucine zipper protein ATHB-10) (HD-ZIP
protein ATHB-10) GB:P46607 [Arabidopsis thaliana]
Length = 747
Score = 35.1 bits (77), Expect = 0.016
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 6 RTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R + KY +D R +E F + + +++ +L+ LGL+ RQVK WFQN
Sbjct: 100 RKRKKYHRHTTDQIR-HMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFWFQN 151
>At1g73360.1 68414.m08491 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein
protodermal factor2 (GI:14276060) [Arabidopsis
thaliana]; similar to homeobox protein GI:1173621 from
[ Phalaenopsis sp.]
Length = 722
Score = 35.1 bits (77), Expect = 0.016
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S R K +Y ++ Q LE F + +++ +L+ LGL+ RQ+K WFQN
Sbjct: 27 SETDRKKKRYHR-HTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIKFWFQN 82
>At1g28420.1 68414.m03494 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7 GI:19486
[Lycopersicon peruvianum]
Length = 1703
Score = 35.1 bits (77), Expect = 0.016
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWF 56
S+ R K K R + + Q LEK + +Y + +AEL+ L LS+RQ+++WF
Sbjct: 32 SKDGRVKPK-RQMKTPFQLETLEKVYSEEKYPSEATRAELSEKLDLSDRQLQMWF 85
>At5g47370.1 68418.m05838 homeobox-leucine zipper protein 2 (HAT2) /
HD-ZIP protein 2 identical to homeobox-leucine zipper
protein HAT2 (HD-ZIP protein 2) [Arabidopsis thaliana]
SP:P46601; contains Pfam profiles PF04618: HD-ZIP
protein N terminus, PF02183: Homeobox associated leucine
zipper, PF00046: Homeobox domain
Length = 283
Score = 34.7 bits (76), Expect = 0.021
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 16 SDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S Q LE+ F + ++K LA L L+ RQV++WFQN
Sbjct: 135 SKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQN 177
>At5g06710.1 68418.m00758 homeobox-leucine zipper protein 14 (HAT14)
/ HD-ZIP protein 14 contains similarity to homeodomain
leucine zipper protein
Length = 336
Score = 34.3 bits (75), Expect = 0.027
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 7 TKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
T+ K R+ S Q LE F + ++K LA L L RQV++WFQN
Sbjct: 188 TRKKLRL--SKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQN 237
>At1g27050.1 68414.m03298 homeobox-leucine zipper family protein
contains Pfam profile:PF00046 Homeobox domain and Pfam
profile:PF00076 RNA recognition motif
Length = 444
Score = 33.5 bits (73), Expect = 0.048
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LE+ F + + RK LA LGL QV +WFQN
Sbjct: 29 LEESFEEEKRLEPDRKLWLAEKLGLQPSQVAVWFQN 64
>At4g04890.1 68417.m00712 homeobox-leucine zipper protein
protodermal factor 2 (PDF2) identical to GP|14276060|
protodermal factor2 (GI:14276060)
Length = 743
Score = 32.7 bits (71), Expect = 0.083
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
S++ K +Y ++ Q ELE F + +++ EL+ L L QVK WFQN
Sbjct: 57 SQRPNKKKRYHR-HTQRQIQELESFFKECPHPDDKQRKELSRDLNLEPLQVKFWFQN 112
>At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identical
to Anthocyaninless2 [Arabidopsis thaliana] GI:5702094
Length = 802
Score = 32.7 bits (71), Expect = 0.083
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 15 YSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
++ Q ELE F + +++ EL+ L L RQVK WFQN
Sbjct: 141 HTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
>At4g37790.1 68417.m05348 homeobox-leucine zipper protein 22 (HAT22)
/ HD-ZIP protein 22 identical to homeobox-leucine zipper
protein HAT22 (HD-ZIP protein 22) (SP:P46604)
[Arabidopsis thaliana]
Length = 278
Score = 32.3 bits (70), Expect = 0.11
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LE F + ++K LA L L RQV++WFQN
Sbjct: 138 LEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQN 173
>At3g61150.1 68416.m06843 homeobox-leucine zipper family protein /
homeodomain GLABRA2 like protein 1 (HD-GL2-1) similar to
Anthocyaninless2 (ANL2) (GP:5702094) Arabidopsis
thaliana, EMBL:AF077335
Length = 808
Score = 32.3 bits (70), Expect = 0.11
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 3 RKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
R + K +Y ++ Q +LE F + +++ +L+ L L RQVK WFQN
Sbjct: 106 RPLKKKKRYHR-HTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVKFWFQN 160
>At2g36610.1 68415.m04488 homeobox-leucine zipper family protein
similar to homeobox protein PpHB8 (GP:7415628)
[Physcomitrella patens]; contains PfamPF00046: Homeobox
domain
Length = 185
Score = 31.9 bits (69), Expect = 0.15
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 37 RKAELAVSLGLSERQVKIWFQN 58
RK +L+ LGL RQ+ +WFQN
Sbjct: 105 RKMKLSKELGLQPRQIAVWFQN 126
>At2g22800.1 68415.m02706 homeobox-leucine zipper protein 9 (HAT9) /
HD-ZIP protein 9 identical to GB:U09341
Length = 274
Score = 31.9 bits (69), Expect = 0.15
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LE+ F + ++K LA L L RQV++WFQN
Sbjct: 125 LEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQN 160
>At2g01430.1 68415.m00066 homeobox-leucine zipper protein 17 (HB-17)
/ HD-ZIP transcription factor 17 identical to
(GI:18857716) homeodomain-leucine zipper protein ATHB-17
(GI:18857716) [Arabidopsis thaliana]
Length = 275
Score = 31.9 bits (69), Expect = 0.15
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
LE F + + ++K LA L L RQ+++WFQN
Sbjct: 151 LEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQN 186
>At4g21750.1 68417.m03148 L1 specific homeobox gene (ML1) /
ovule-specific homeobox protein A20 nearly identical to
meristem L1 layer homeobox protein A20 (AtML1)
[Arabidopsis thaliana] GI:1881536, protodermal factor2
(PDF2) [Arabidopsis thaliana] GI:14276060
Length = 762
Score = 31.5 bits (68), Expect = 0.19
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 2 SRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+++ K +Y ++ Q ELE F + +++ EL+ L L QVK WFQN
Sbjct: 57 NQRPNKKKRYHR-HTQRQIQELESFFKECPHPDDKQRKELSRELSLEPLQVKFWFQN 112
>At4g03250.1 68417.m00444 homeobox-leucine zipper family protein
similar to homeobox transcription factor Hox7
[Lycopersicon peruvianum] GI:19486; contains Pfam
PF00046: Homeobox domain
Length = 476
Score = 31.5 bits (68), Expect = 0.19
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 21 LELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWF 56
+ LE ++ +Y T K +LA +GL+E+QV WF
Sbjct: 1 MALENFYNEHKYPTEEMKGKLAEEVGLTEKQVSGWF 36
>At2g32370.1 68415.m03956 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
HD-Zip homeo domain OCL5 protein (GI:8920427) [Zea
mays]; contains Pfam PF00046: Homeobox domain and Pfam
PF01852: START domain
Length = 721
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 15 YSDHQRL---ELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
Y+ H +L E+E F + +++ +L+ LGL Q+K WFQN
Sbjct: 72 YNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQLGLDPVQIKFWFQN 118
>At4g17710.1 68417.m02645 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
HD-Zip homeo domain OCL4 protein (GI:8920425) [Zea
mays]; contains Pfam PF00046: Homeobox domain and Pfam
PF01852: START domain
Length = 709
Score = 30.7 bits (66), Expect = 0.34
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 22 ELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
++E F + + + + L+ LGLS QVK WFQN
Sbjct: 102 QMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQN 138
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome
deletion transcript 9 [Homo sapiens]; contains Pfam
PF02791: DDT domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 30.3 bits (65), Expect = 0.44
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 23 LEKEFHYSRYITIRRKAELAVSLGLSERQVKIWF 56
LE + Y + +A+L+V L LS+RQ+++WF
Sbjct: 32 LENTYSAEPYPSEAIRADLSVKLNLSDRQLQMWF 65
>At4g25530.1 68417.m03681 homeodomain protein (FWA) identical to
Homeobox protein FWA (SP:Q9FVI6) [Arabidopsis
thaliana]; contains Pfam profiles PF01852: START domain
and PF00046: Homeobox domain; identical to cDNA
homeodomain-containing transcription factor FWA
(FWA)GI:13506819
Length = 686
Score = 29.9 bits (64), Expect = 0.59
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 18 HQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
+Q ELE + + + T ++ EL L + QVK WFQN
Sbjct: 50 YQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQN 90
>At1g05230.2 68414.m00529 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
homeobox 1 (GP:12002853) {Picea abies}; Strong
similarity to Phalaenopsis homeobox protein (gb|U34743)
Length = 721
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 15 YSDHQRL---ELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
Y H +L E+E F + +++ +L+ L L QVK WFQN
Sbjct: 68 YHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELNLEPLQVKFWFQN 114
>At1g05230.1 68414.m00528 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
homeobox 1 (GP:12002853) {Picea abies}; Strong
similarity to Phalaenopsis homeobox protein (gb|U34743)
Length = 721
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 15 YSDHQRL---ELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
Y H +L E+E F + +++ +L+ L L QVK WFQN
Sbjct: 68 YHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELNLEPLQVKFWFQN 114
>At5g60690.1 68418.m07616 homeodomain-leucine zipper protein
Revoluta (REV) / fascicular fiberless 1 (IFL1)
identical to HD-zip transcription factor Revoluta
(GI:9759333) {Arabidopsis thaliana}; contains Pfam
profiles PF01852: START domain and PF00046: Homeobox
domain
Length = 842
Score = 27.5 bits (58), Expect = 3.1
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 1 MSRKTRTKDKYRVVYSDHQRLELEKEF-HYSRYITIRRKA---ELAVSLGLSERQVKIWF 56
M+R + KY V Y+ Q LE+ + + ++RR+ E ++ + +Q+K+WF
Sbjct: 16 MNRHLDSSGKY-VRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVWF 74
Query: 57 QN 58
QN
Sbjct: 75 QN 76
>At1g52150.2 68414.m05885 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar
to to HD-zip transcription factor (athb-8) (GI:7270235)
[Arabidopsis thaliana]; contains Pfam profiles PF01852:
START domain, PF00046: Homeobox domain
Length = 837
Score = 27.5 bits (58), Expect = 3.1
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 10 KYRVVYSDHQRLELEKEFH-YSRYITIRRKA---ELAVSLGLSERQVKIWFQN 58
KY V Y+ Q LE+ +H + +IRR+ E + + +Q+K+WFQN
Sbjct: 17 KY-VRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
>At1g52150.1 68414.m05884 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar
to to HD-zip transcription factor (athb-8) (GI:7270235)
[Arabidopsis thaliana]; contains Pfam profiles PF01852:
START domain, PF00046: Homeobox domain
Length = 836
Score = 27.5 bits (58), Expect = 3.1
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 10 KYRVVYSDHQRLELEKEFH-YSRYITIRRKA---ELAVSLGLSERQVKIWFQN 58
KY V Y+ Q LE+ +H + +IRR+ E + + +Q+K+WFQN
Sbjct: 17 KY-VRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQN 68
>At3g43150.1 68416.m04546 hypothetical protein
Length = 194
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 9 DKYRVVYSDHQRLELEKEFHYSRYITIRRK 38
DK+R +Y + QRL L+++ +R I RK
Sbjct: 68 DKHRRLYDERQRLGLKRQTLEARIARIERK 97
>At3g03260.1 68416.m00322 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar
to L1 specific homeobox gene ATML1/ovule-specific
homeobox protein A20, GB:CAB36819
Length = 699
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 15 YSDHQRLELEKEFHYSRYITIRRKAELAVSLGLSERQVKIWFQN 58
++ Q LE F + R++ +L L L Q+K WFQN
Sbjct: 30 HTPQQIQRLEAYFKECPHPDERQRNQLCRELKLEPDQIKFWFQN 73
>At5g65200.1 68418.m08200 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 556
Score = 25.8 bits (54), Expect = 9.6
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 1 MSRKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGLS 48
M + TRT D+ RV + L L K SRY ++ A LA + LS
Sbjct: 248 MRKMTRTNDEARVSLCSPRILSLLKNMIVSRYSLVQTNA-LASLVNLS 294
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.134 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,349,927
Number of Sequences: 28952
Number of extensions: 33917
Number of successful extensions: 144
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 97
Number of HSP's gapped (non-prelim): 51
length of query: 132
length of database: 12,070,560
effective HSP length: 74
effective length of query: 58
effective length of database: 9,928,112
effective search space: 575830496
effective search space used: 575830496
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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