Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001179-TA|BGIBMGA001179-PA|undefined
         (117 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    33   7e-04
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    33   7e-04
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    20   5.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   7.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    20   7.2  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    19   9.5  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    19   9.5  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    19   9.5  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      19   9.5  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 33.1 bits (72), Expect = 7e-04
 Identities = 11/15 (73%), Positives = 14/15 (93%)

Query: 100 YEWMKKPNYQTQPNP 114
           YEW+KK +YQ+QPNP
Sbjct: 124 YEWIKKTSYQSQPNP 138


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 33.1 bits (72), Expect = 7e-04
 Identities = 11/15 (73%), Positives = 14/15 (93%)

Query: 100 YEWMKKPNYQTQPNP 114
           YEW+KK +YQ+QPNP
Sbjct: 124 YEWIKKTSYQSQPNP 138


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 49  PDPHHFPKREPGEREIADMPSP 70
           P PHH P R P      D+ +P
Sbjct: 739 PHPHHQPPRNPVGTNPHDINNP 760


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 49  PDPHHFPKREPGEREIADMPSP 70
           P PHH P R P      D+ +P
Sbjct: 631 PHPHHQPPRNPVGTNPHDINNP 652


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 54  FPKREPGEREIADMPSPARGDLA 76
           +P+  P  +E+    S +RG +A
Sbjct: 253 YPEEAPQRKELLRFASESRGSVA 275


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 45   GEWTPDPHH 53
            G++ PDPH+
Sbjct: 1106 GQYVPDPHN 1114


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 27  HQNLEEQQWCAWNGAPATGEWTPDPHHFP 55
           H  L+EQQ    N A A     P P+  P
Sbjct: 88  HCLLQEQQQAGANMAAAANLLRPHPYLSP 116


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
          peptide isoform C protein.
          Length = 136

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 51 PHHFPKR 57
          PHHF KR
Sbjct: 40 PHHFTKR 46


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
          peptide isoform B protein.
          Length = 120

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 51 PHHFPKR 57
          PHHF KR
Sbjct: 40 PHHFTKR 46


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
          peptide isoform A protein.
          Length = 140

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 51 PHHFPKR 57
          PHHF KR
Sbjct: 40 PHHFTKR 46


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 55  PKREPGEREIADMPSPA 71
           PK +PGER+   + + A
Sbjct: 105 PKAKPGERKFIKVTTKA 121


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.134    0.468 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,286
Number of Sequences: 317
Number of extensions: 826
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of query: 117
length of database: 114,650
effective HSP length: 50
effective length of query: 67
effective length of database: 98,800
effective search space:  6619600
effective search space used:  6619600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.2 bits)
S2: 38 (19.4 bits)