GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001179-TA|BGIBMGA001179-PA|undefined
         (117 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17243 Cluster: Cad protein; n=4; Coelomata|Rep: Cad pr...   166   1e-40
UniRef50_Q95W39 Cluster: Caudal; n=1; Schistocerca gregaria|Rep:...    38   0.044
UniRef50_A0MIN3 Cluster: Caudal; n=5; Nasonia vitripennis|Rep: C...    38   0.044
UniRef50_UPI0000DB6BA8 Cluster: PREDICTED: similar to caudal CG1...    37   0.077
UniRef50_Q9XYQ3 Cluster: Caudal protein homolog; n=4; Protostomi...    37   0.077
UniRef50_Q869A1 Cluster: Caudal; n=1; Parasteatoda tepidariorum|...    34   0.55 
UniRef50_A2Y697 Cluster: Putative uncharacterized protein; n=3; ...    33   1.3  
UniRef50_O96715 Cluster: Caudal protein; n=3; Protostomia|Rep: C...    33   1.3  
UniRef50_Q2J9V1 Cluster: Putative uncharacterized protein precur...    31   5.1  
UniRef50_P09085 Cluster: Homeotic protein caudal; n=7; Protostom...    31   5.1  
UniRef50_Q0CX35 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  

>UniRef50_Q17243 Cluster: Cad protein; n=4; Coelomata|Rep: Cad
           protein - Bombyx mori (Silk moth)
          Length = 244

 Score =  166 bits (403), Expect = 1e-40
 Identities = 76/115 (66%), Positives = 76/115 (66%)

Query: 1   MVNYVNPLAMXXXXXXXXXXXXXXXXHQNLEEQQWCAWNGAPATGEWTPDPHHFPKREPG 60
           MVNYVNPLAM                HQNLEEQQWCAWNGAPATGEWTPDPHHFPKREPG
Sbjct: 1   MVNYVNPLAMYQGKGGQYGGGWYGWQHQNLEEQQWCAWNGAPATGEWTPDPHHFPKREPG 60

Query: 61  EREIADMPSPARGDLAXXXXXXXXXXXXXXXXXXXXXXXYEWMKKPNYQTQPNPG 115
           EREIADMPSPARGDLA                       YEWMKKPNYQTQPNPG
Sbjct: 61  EREIADMPSPARGDLASPGEGSPGSGSRPSQPPGPPRSPYEWMKKPNYQTQPNPG 115


>UniRef50_Q95W39 Cluster: Caudal; n=1; Schistocerca gregaria|Rep:
           Caudal - Schistocerca gregaria (Desert locust)
          Length = 173

 Score = 37.9 bits (84), Expect = 0.044
 Identities = 13/15 (86%), Positives = 15/15 (100%)

Query: 100 YEWMKKPNYQTQPNP 114
           YEWMKKP+YQ+QPNP
Sbjct: 87  YEWMKKPSYQSQPNP 101


>UniRef50_A0MIN3 Cluster: Caudal; n=5; Nasonia vitripennis|Rep:
           Caudal - Nasonia vitripennis (Parasitic wasp)
          Length = 381

 Score = 37.9 bits (84), Expect = 0.044
 Identities = 13/16 (81%), Positives = 14/16 (87%)

Query: 100 YEWMKKPNYQTQPNPG 115
           YEWMKKP+Y  QPNPG
Sbjct: 206 YEWMKKPSYHNQPNPG 221


>UniRef50_UPI0000DB6BA8 Cluster: PREDICTED: similar to caudal
           CG1759-PA, isoform A; n=1; Apis mellifera|Rep:
           PREDICTED: similar to caudal CG1759-PA, isoform A - Apis
           mellifera
          Length = 358

 Score = 37.1 bits (82), Expect = 0.077
 Identities = 13/16 (81%), Positives = 15/16 (93%)

Query: 100 YEWMKKPNYQTQPNPG 115
           YEWMKK +YQ+QPNPG
Sbjct: 205 YEWMKKTSYQSQPNPG 220


>UniRef50_Q9XYQ3 Cluster: Caudal protein homolog; n=4;
           Protostomia|Rep: Caudal protein homolog - Anopheles
           gambiae (African malaria mosquito)
          Length = 394

 Score = 37.1 bits (82), Expect = 0.077
 Identities = 13/16 (81%), Positives = 15/16 (93%)

Query: 100 YEWMKKPNYQTQPNPG 115
           YEWMKK +YQ+QPNPG
Sbjct: 195 YEWMKKQSYQSQPNPG 210


>UniRef50_Q869A1 Cluster: Caudal; n=1; Parasteatoda
           tepidariorum|Rep: Caudal - Achaearanea tepidariorum
           (House spider)
          Length = 300

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 11/16 (68%), Positives = 15/16 (93%)

Query: 100 YEWMKKPNYQTQPNPG 115
           YEW+K+ +YQ+QPNPG
Sbjct: 190 YEWIKRTSYQSQPNPG 205


>UniRef50_A2Y697 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 304

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 15/32 (46%), Positives = 17/32 (53%)

Query: 40  GAPATGEWTPDPHHFPKREPGEREIADMPSPA 71
           G P     +P P   P+REPGER     PSPA
Sbjct: 164 GRPGGARASPSPPPPPRREPGERPTRRSPSPA 195


>UniRef50_O96715 Cluster: Caudal protein; n=3; Protostomia|Rep:
           Caudal protein - Tribolium castaneum (Red flour beetle)
          Length = 287

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 11/15 (73%), Positives = 14/15 (93%)

Query: 100 YEWMKKPNYQTQPNP 114
           YEW+KK +YQ+QPNP
Sbjct: 124 YEWIKKTSYQSQPNP 138


>UniRef50_Q2J9V1 Cluster: Putative uncharacterized protein
          precursor; n=1; Frankia sp. CcI3|Rep: Putative
          uncharacterized protein precursor - Frankia sp. (strain
          CcI3)
          Length = 217

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 12/19 (63%), Positives = 12/19 (63%), Gaps = 2/19 (10%)

Query: 38 WNGAPATGEWTPDP--HHF 54
          W GAP  G WT DP  HHF
Sbjct: 42 WVGAPVAGTWTSDPATHHF 60


>UniRef50_P09085 Cluster: Homeotic protein caudal; n=7;
           Protostomia|Rep: Homeotic protein caudal - Drosophila
           melanogaster (Fruit fly)
          Length = 427

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)

Query: 100 YEWMKKPNYQTQPNPG 115
           ++WMKKP Y  QP PG
Sbjct: 253 FDWMKKPAYPAQPQPG 268


>UniRef50_Q0CX35 Cluster: Putative uncharacterized protein; n=1;
           Aspergillus terreus NIH2624|Rep: Putative
           uncharacterized protein - Aspergillus terreus (strain
           NIH 2624)
          Length = 380

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 31  EEQQWCAWNGAPATG--EWTPDPHHFPKREPGEREIADMPSPARGDL 75
           +EQ+W ++   P+TG  E  P PH        E ++   PS +  DL
Sbjct: 144 KEQKWASYGRRPSTGRREPAPAPHLHKSPTLEEEDLTSSPSESESDL 190


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.315    0.134    0.468 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,855,070
Number of Sequences: 1657284
Number of extensions: 3716892
Number of successful extensions: 4919
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4907
Number of HSP's gapped (non-prelim): 12
length of query: 117
length of database: 575,637,011
effective HSP length: 90
effective length of query: 27
effective length of database: 426,481,451
effective search space: 11514999177
effective search space used: 11514999177
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 65 (30.3 bits)