GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001179-TA|BGIBMGA001179-PA|undefined
         (117 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BA000025-63|BAB63315.1|  136|Homo sapiens SPR1 protein.                29   2.8  
AL773544-4|CAI18481.1|  136|Homo sapiens psoriasis susceptibilit...    29   2.8  
AL662867-4|CAI17721.1|  136|Homo sapiens psoriasis susceptibilit...    29   2.8  
AL662844-4|CAI18325.1|  136|Homo sapiens psoriasis susceptibilit...    29   2.8  
AF484420-1|AAO49377.1|  136|Homo sapiens psoriasis susceptibilit...    29   2.8  
AB202103-4|BAE78627.1|  136|Homo sapiens chromosome 6 open readi...    29   2.8  
AB103620-3|BAF31284.1|  136|Homo sapiens hypothetical protein pr...    29   2.8  
AB088114-3|BAC54949.1|  136|Homo sapiens hypothetical protein pr...    29   2.8  
AB031480-1|BAA88131.1|  136|Homo sapiens SPR1 protein.                 29   2.8  

>BA000025-63|BAB63315.1|  136|Homo sapiens SPR1 protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)

Query: 38  WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 71
           W   P TG W P+P   P+ +P +    D P PA
Sbjct: 73  WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103


>AL773544-4|CAI18481.1|  136|Homo sapiens psoriasis susceptibility 1
           candidate 2 protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)

Query: 38  WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 71
           W   P TG W P+P   P+ +P +    D P PA
Sbjct: 73  WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103


>AL662867-4|CAI17721.1|  136|Homo sapiens psoriasis susceptibility 1
           candidate 2 protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)

Query: 38  WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 71
           W   P TG W P+P   P+ +P +    D P PA
Sbjct: 73  WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103


>AL662844-4|CAI18325.1|  136|Homo sapiens psoriasis susceptibility 1
           candidate 2 protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)

Query: 38  WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 71
           W   P TG W P+P   P+ +P +    D P PA
Sbjct: 73  WRDLPETGVWLPEP---PRTDPPQPPRPDDPWPA 103


>AF484420-1|AAO49377.1|  136|Homo sapiens psoriasis susceptibility 1
           candidate 2 protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)

Query: 38  WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 71
           W   P TG W P+P   P+ +P +    D P PA
Sbjct: 73  WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103


>AB202103-4|BAE78627.1|  136|Homo sapiens chromosome 6 open reading
           frame 17 protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)

Query: 38  WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 71
           W   P TG W P+P   P+ +P +    D P PA
Sbjct: 73  WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103


>AB103620-3|BAF31284.1|  136|Homo sapiens hypothetical protein
           protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)

Query: 38  WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 71
           W   P TG W P+P   P+ +P +    D P PA
Sbjct: 73  WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103


>AB088114-3|BAC54949.1|  136|Homo sapiens hypothetical protein
           protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)

Query: 38  WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 71
           W   P TG W P+P   P+ +P +    D P PA
Sbjct: 73  WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103


>AB031480-1|BAA88131.1|  136|Homo sapiens SPR1 protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)

Query: 38  WNGAPATGEWTPDPHHFPKREPGEREIADMPSPA 71
           W   P TG W P+P   P+ +P +    D P PA
Sbjct: 73  WRDLPETGVWPPEP---PRTDPPQPPRPDDPWPA 103


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.315    0.134    0.468 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,106,305
Number of Sequences: 224733
Number of extensions: 543435
Number of successful extensions: 776
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 776
Number of HSP's gapped (non-prelim): 9
length of query: 117
length of database: 73,234,838
effective HSP length: 80
effective length of query: 37
effective length of database: 55,256,198
effective search space: 2044479326
effective search space used: 2044479326
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)