GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001178-TA|BGIBMGA001178-PA|undefined
         (103 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   2.2  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   2.2  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    23   3.0  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   3.0  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    21   6.9  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    21   6.9  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            21   9.1  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 6   NPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPE 41
           +P +     GPI++   SP  A+   P     PP E
Sbjct: 212 SPMSSVSSPGPISSNPQSPYGALPETPPPAYSPPEE 247


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 36   GKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNT 74
            G P      P A A ++G  +   A     GP PAS ++
Sbjct: 1000 GGPMAAGGPPSATAISYGLTMAGAAGSVSNGPVPASLDS 1038


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 8   WTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPE 41
           W  +K +    A     G AV+ +   +GKP PE
Sbjct: 124 WNQSKYKSFAEAAGHPDGLAVLGVFLKVGKPHPE 157


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 21  ASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPL 59
           +SSP     ++  LI  PP + ++   P    GQ ++ L
Sbjct: 461 SSSPPLTPNTICGLIAPPPQQQQQDPTPQTLMGQVMEAL 499


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
          protein.
          Length = 755

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/31 (29%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 3  VRQNPWTPTKRRGPIAAEASSPGPAVVSLPS 33
          ++ +P  P+ +  P+A   ++PGP+ + L S
Sbjct: 70 LQTHPSVPSLK--PVAGAPAAPGPSALPLSS 98


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
          protein.
          Length = 753

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/31 (29%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 3  VRQNPWTPTKRRGPIAAEASSPGPAVVSLPS 33
          ++ +P  P+ +  P+A   ++PGP+ + L S
Sbjct: 70 LQTHPSVPSLK--PVAGAPAAPGPSALPLSS 98


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 7    PWTPTKRRGPIAAEASSPGPAVVS 30
            P   T    PI++   +PGP V+S
Sbjct: 1086 PALTTPPTEPISSATPAPGPFVIS 1109


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.135    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,484
Number of Sequences: 2123
Number of extensions: 4874
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 7
length of query: 103
length of database: 516,269
effective HSP length: 55
effective length of query: 48
effective length of database: 399,504
effective search space: 19176192
effective search space used: 19176192
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)