Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001178-TA|BGIBMGA001178-PA|undefined
(103 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 33 0.049
U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe chro... 31 0.20
AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical ... 31 0.20
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 31 0.20
L23648-9|AAK95877.1| 466|Caenorhabditis elegans Prion-like-(q/n... 30 0.26
Z70756-9|CAA94796.1| 228|Caenorhabditis elegans Hypothetical pr... 29 0.61
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 0.61
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 0.61
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 28 1.1
Z70756-11|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 28 1.1
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 28 1.1
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 28 1.4
Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 27 1.8
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 3.2
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 3.2
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 26 5.6
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 25 7.5
Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical pr... 25 7.5
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 25 7.5
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 25 7.5
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 25 7.5
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 25 7.5
U80445-10|AAB37800.1| 141|Caenorhabditis elegans Hypothetical p... 25 9.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 25 9.9
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 25 9.9
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 32.7 bits (71), Expect = 0.049
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 3 VRQNPWTPTKRRGPIAAEASS--PGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLA 60
VRQNP P ++ P + +A+ P PA P + PP + P PA QK P+
Sbjct: 377 VRQNPPMPAVQQAPSSQQATQAPPKPAPQQAPPVQQNPPKPTPSPAPPA----QKAQPVT 432
Query: 61 NIAKAGP 67
+ P
Sbjct: 433 QQQASAP 439
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 3 VRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPP-PESRKPRAP 48
V+Q P P ++ P A + P PA P + PP P ++ +AP
Sbjct: 306 VQQAPPKPAVQQAPTRAAPAPPKPAPQQAPPVQQNPPKPAVQQAQAP 352
Score = 25.8 bits (54), Expect = 5.6
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Query: 3 VRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKP--RAPAFTFGQKLDPLA 60
V+QNP P ++ +P P V P KP P+ P + P Q+
Sbjct: 337 VQQNPPKPAVQQAQAPVVQQAPAPPVQQAPP---KPTPQQAPPVRQNPPMPAVQQAPSSQ 393
Query: 61 NIAKAGPGPA 70
+A P PA
Sbjct: 394 QATQAPPKPA 403
Score = 25.4 bits (53), Expect = 7.5
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 3 VRQNPWTPTKRRGPIA-AEASSPGPAVVSLPSLIGKPPPESRKPRA 47
V+Q P ++ P+A A + P V P L+ + PP P+A
Sbjct: 74 VQQAPPAQPAQQKPVAQAPPAQAKPTVQQAPILVAQAPPNPPAPQA 119
>U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe
chromosome segregationprotein) homolog protein 1
protein.
Length = 307
Score = 30.7 bits (66), Expect = 0.20
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 10 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 49
PT RR P+ SS PA S P+ P P +KP PA
Sbjct: 216 PTNRRAPMLIAPSST-PAGPSKPTARKPPTPRFKKPSTPA 254
>AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical
protein Y43C5A.4 protein.
Length = 218
Score = 30.7 bits (66), Expect = 0.20
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 16 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAF 50
P+ + P PAV + KPPPE +P+ P F
Sbjct: 158 PVEPSPAPPVPAVPAAVEQEWKPPPEFERPKHPGF 192
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 30.7 bits (66), Expect = 0.20
Identities = 18/45 (40%), Positives = 19/45 (42%)
Query: 25 GPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 69
GPA V L +I PP P P FG P A I GP P
Sbjct: 73 GPACVPLAPIIVNGPPPCFGPACPPPCFGPACAPPAPIIVNGPPP 117
Score = 29.9 bits (64), Expect = 0.35
Identities = 15/38 (39%), Positives = 16/38 (42%)
Query: 32 PSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 69
P + PPP P P FG PLA I GP P
Sbjct: 52 PIFVAPPPPPCFGPACPPPCFGPACVPLAPIIVNGPPP 89
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/45 (35%), Positives = 17/45 (37%)
Query: 25 GPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 69
GPA +I PP P P FG P A I GP P
Sbjct: 101 GPACAPPAPIIVNGPPPCFGPACPPPCFGPACAPSAPIIVNGPPP 145
>L23648-9|AAK95877.1| 466|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 38
protein.
Length = 466
Score = 30.3 bits (65), Expect = 0.26
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 3 VRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPE---SRKPRAPAFTFGQKLDPL 59
++Q+ R G + AE + P VS+P G PP + S + RA T Q+ +P
Sbjct: 206 LQQHQQQQQNRAGQLQAEQAFANPPTVSIPPQTGHPPQQTSASSQQRAQE-TMAQQTEPQ 264
Query: 60 ANIAKA 65
++I ++
Sbjct: 265 SHIRES 270
>Z70756-9|CAA94796.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 228
Score = 29.1 bits (62), Expect = 0.61
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 17 IAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLAN-IAKAGPGPASYNTE 75
+AA A +P P V + P+L P APAF P+A+ + A P A+ +
Sbjct: 123 LAAPAFAPAPVVAAAPALAPAYAPAPVVAAAPAFAPAYAPAPVASPMIAAAPALAAASIN 182
Query: 76 GM 77
G+
Sbjct: 183 GL 184
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 0.61
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Query: 2 GVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKP-PPESRKPRAPAFTFGQKLDPLA 60
G NP P K + EA +P P P G P PP P PA G+ P A
Sbjct: 127 GAPGNPGAPGKGAA-VPCEAKTPPPCK---PCPAGPPGPPGPDGPAGPAGPDGEAGSPAA 182
Query: 61 NIAKAGPGPA 70
PGP+
Sbjct: 183 PSPPGPPGPS 192
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 0.61
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Query: 7 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPP-----ESRKPRAPAFTFGQKLDPLAN 61
P PT + P P P + PS+I PPP E +K P G + +
Sbjct: 1360 PPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSEEKKNPLPTANNGHTDNGSDD 1419
Query: 62 IAKAGPGPASYNTEGM 77
I + P P S N M
Sbjct: 1420 IDRNVPTPPSQNQYSM 1435
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/65 (24%), Positives = 24/65 (36%)
Query: 5 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAK 64
+ P T P + + P P S P + P ES+ P T +DP+ +
Sbjct: 575 EEPATEVPNPQPPSPPSPEPEPEPKSTPEPVTDGPNESQSTALPQQTTDAPVDPVTEASP 634
Query: 65 AGPGP 69
P P
Sbjct: 635 LNPQP 639
>Z70756-11|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 16 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 69
P+AA + P V++ P+ + PP P AP A + A P P
Sbjct: 50 PVAAPVLAAAPTVLAAPAPLLAPPAPLLAPPAPVLAAAPAFAAPAPVFAAPPAP 103
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 16 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 49
P A A + P V P + PPP + P APA
Sbjct: 353 PTPAPAPAEDPVVTPAPEELTTPPPPAPPPPAPA 386
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 27.9 bits (59), Expect = 1.4
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 10 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 69
PTK+R +A + + G A + + P PE APA L P + A A G
Sbjct: 86 PTKKRR-VARDYAEGGAAPTAPAEPVPAPAPEPEAAPAPAPVAEPALAPSPDAAPAADG- 143
Query: 70 ASYNTEGMTAKG 81
ASY+ G
Sbjct: 144 ASYSAGAAAPAG 155
>Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical
protein H40L08.1 protein.
Length = 444
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 10 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAF 50
P + AS+P + SLP+ +P P+SR+ P +
Sbjct: 47 PEPIHNTLNTSASTPSSSAASLPTTPDEPVPDSRRAVLPRY 87
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 5 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKP 45
+ P TP+ P+ + SSP P +V P+ P ++ KP
Sbjct: 522 EKPVTPSPSASPLPSPVSSPAPQLVQKPT----TPTDASKP 558
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 10 PTKRRGPIAAEASSPGPAVVSLP----SLIGKPPPESRKPRAPAFTFGQKLDPLANIAKA 65
P+ PI AS P PA + P + + P + +P APA D +++ +
Sbjct: 493 PSDSAAPIGPAASEPAPAPIEAPATDAATLETAPAPAAEP-APAAEAAAGYDAPSSVPEE 551
Query: 66 GPGPA 70
P PA
Sbjct: 552 TPAPA 556
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 16 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 69
P E +P PA S P+ + P P P+ P Q P+ I + P P
Sbjct: 61 PQQLEQPTPAPAPESAPAPVQCPEPTPEVPQQPT----QVSAPVQEITQGAPAP 110
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 26.6 bits (56), Expect = 3.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 17 IAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPA 70
+AA A S P PS PPP +R+ R+P+ + + +K+ P PA
Sbjct: 293 VAARAKSGSPRRRRSPSASKSPPP-ARRRRSPSQSKSPAPKRAKSRSKSPPAPA 345
Score = 25.0 bits (52), Expect = 9.9
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 5 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 49
++P P +RR P +++ SP P PS K P R+ R+P+
Sbjct: 432 KSPPAPRRRRSP--SQSKSPAPRRRRSPS---KSPQAPRRRRSPS 471
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 14 RGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 49
+ PI +S P++ S+PS + P S P +P+
Sbjct: 1616 QAPIPPASSPSAPSIPSIPSTLPVAPSSSSVPSSPS 1651
Score = 26.2 bits (55), Expect = 4.3
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 11 TKRRGPIAAEASSPGPAVVSLPS--LIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPG 68
T + P + +P PA PS + G P E KP P+ + +P P
Sbjct: 532 TDNQVPETSHEMAPAPAPQPSPSSPVYGPTPSEPAKPSMPSGESPAQPEPSIPAVNPEPS 591
Query: 69 PASYNTEG 76
P+ ++ G
Sbjct: 592 PSQPSSSG 599
Score = 25.4 bits (53), Expect = 7.5
Identities = 16/60 (26%), Positives = 22/60 (36%)
Query: 10 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 69
P + R I A +PGPA+ P+ P P Q +P + A P P
Sbjct: 1730 PVEHRYEIPAPGPAPGPALEPAPAPTSAPQIVEPLPPVQPLPQPQPTEPEEPLPIATPAP 1789
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 25.8 bits (54), Expect = 5.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 21 ASSPGPAVVSLPSLIGKPPPESRKPR--------APAFTFGQKLDPLANIAKAGP 67
A +P AV S +++ K P S+ P APA G P AN AKA P
Sbjct: 287 APAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEP 341
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 25.8 bits (54), Expect = 5.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 21 ASSPGPAVVSLPSLIGKPPPESRKPR--------APAFTFGQKLDPLANIAKAGP 67
A +P AV S +++ K P S+ P APA G P AN AKA P
Sbjct: 287 APAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEP 341
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 25.8 bits (54), Expect = 5.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 21 ASSPGPAVVSLPSLIGKPPPESRKPR--------APAFTFGQKLDPLANIAKAGP 67
A +P AV S +++ K P S+ P APA G P AN AKA P
Sbjct: 287 APAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEP 341
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 25.8 bits (54), Expect = 5.6
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 7 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKA- 65
P P P A A PA P+ P PE+ AP + P+ +A A
Sbjct: 480 PAEPAPAPAPAPAPAPEAAPAPEPAPAPAPAPAPEAAPAAAPDAAPAEPA-PVPEVAPAP 538
Query: 66 GPGPAS 71
P PA+
Sbjct: 539 APAPAA 544
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical protein
F40F11.2 protein.
Length = 1593
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 16 PIAAEASSPGPAVVSLPSLIGKPPPESRK 44
P + + P VVS S+ G+P P SRK
Sbjct: 1322 PSTSTSIPPASTVVSSVSVKGRPAPASRK 1350
>Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical
protein B0001.2 protein.
Length = 926
Score = 25.4 bits (53), Expect = 7.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 7 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESR 43
P+ TK G +A + +PG A + ++ + P E R
Sbjct: 89 PFYKTKEFGDVACKGQAPGEAGTNHNIIVSRLPEEQR 125
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 17 IAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 49
+ E S+P A S PS PPP R+P++P+
Sbjct: 566 VVEEESAPPAARQSSPS----PPPARRRPQSPS 594
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 17 IAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 49
+ E S+P A S PS PPP R+P++P+
Sbjct: 516 VVEEESAPPAARQSSPS----PPPARRRPQSPS 544
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 17 IAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 49
+ E S+P A S PS PPP R+P++P+
Sbjct: 566 VVEEESAPPAARQSSPS----PPPARRRPQSPS 594
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 17 IAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 49
+ E S+P A S PS PPP R+P++P+
Sbjct: 566 VVEEESAPPAARQSSPS----PPPARRRPQSPS 594
>U80445-10|AAB37800.1| 141|Caenorhabditis elegans Hypothetical
protein C50F2.7 protein.
Length = 141
Score = 25.0 bits (52), Expect = 9.9
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 23 SPGPAVVSLPSLIGKPP-----PESRKPRAPAFT 51
SP SLP+ P P+S KPRAP+FT
Sbjct: 67 SPSSVGSSLPTSSSGPEIKTTTPKSGKPRAPSFT 100
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.0 bits (52), Expect = 9.9
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 6 NPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFT 51
+P P R A +S P P +P PPP S PR P T
Sbjct: 121 SPPPPPPPRKSRAGGSSPPPPPPPRVPRT---PPPRSPPPRRPPMT 163
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 14 RGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 49
+G AA A++P PA + + P P + P APA
Sbjct: 360 QGGAAAGAAAPPPAPAAAAAPEPAPAPAAAPPPAPA 395
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,769,359
Number of Sequences: 27539
Number of extensions: 125445
Number of successful extensions: 552
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 504
Number of HSP's gapped (non-prelim): 61
length of query: 103
length of database: 12,573,161
effective HSP length: 71
effective length of query: 32
effective length of database: 10,617,892
effective search space: 339772544
effective search space used: 339772544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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