Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001178-TA|BGIBMGA001178-PA|undefined
(103 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identic... 32 0.063
At5g38560.1 68418.m04662 protein kinase family protein contains ... 31 0.15
At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein ... 31 0.15
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 31 0.15
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 30 0.26
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 30 0.34
At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identica... 30 0.34
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 29 0.45
At3g10525.1 68416.m01263 expressed protein 29 0.45
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 29 0.59
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 29 0.78
At4g32640.1 68417.m04646 sec23/sec24 transport protein-related 29 0.78
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 29 0.78
At4g32490.1 68417.m04625 plastocyanin-like domain-containing pro... 28 1.0
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 28 1.0
At1g27950.1 68414.m03424 lipid transfer protein-related low simi... 28 1.0
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 1.4
At5g37940.1 68418.m04570 NADP-dependent oxidoreductase, putative... 27 1.8
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 27 1.8
At1g37140.1 68414.m04640 RNA-binding protein, putative similar t... 27 1.8
At5g25270.1 68418.m02996 expressed protein 27 2.4
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 27 2.4
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 27 3.2
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 27 3.2
At1g49340.2 68414.m05531 phosphatidylinositol 3- and 4-kinase fa... 27 3.2
At1g49340.1 68414.m05530 phosphatidylinositol 3- and 4-kinase fa... 27 3.2
At5g38000.1 68418.m04576 NADP-dependent oxidoreductase, putative... 26 4.2
At4g34150.1 68417.m04846 C2 domain-containing protein similar to... 26 4.2
At3g17900.1 68416.m02280 expressed protein 26 4.2
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 26 4.2
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 26 4.2
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 26 4.2
At5g44190.1 68418.m05407 myb family transcription factor (GLK2) ... 26 5.5
At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1 (MSH... 26 5.5
At3g15600.1 68416.m01976 hypothetical protein low similarity to ... 26 5.5
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 26 5.5
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 26 5.5
At1g61080.1 68414.m06877 proline-rich family protein 26 5.5
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 26 5.5
At1g17790.1 68414.m02202 DNA-binding bromodomain-containing prot... 26 5.5
At1g10460.1 68414.m01178 germin-like protein (GLP7) identical to... 26 5.5
At1g07240.1 68414.m00770 UDP-glucoronosyl/UDP-glucosyl transfera... 26 5.5
At5g08200.1 68418.m00959 peptidoglycan-binding LysM domain-conta... 25 7.3
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 25 7.3
At3g61260.1 68416.m06856 DNA-binding family protein / remorin fa... 25 7.3
At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family... 25 7.3
At3g24540.1 68416.m03082 protein kinase family protein contains ... 25 7.3
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 25 7.3
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 25 7.3
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 25 7.3
At2g24030.2 68415.m02870 expressed protein and genefinder 25 7.3
At2g24030.1 68415.m02871 expressed protein and genefinder 25 7.3
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 25 7.3
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 25 7.3
At1g52030.2 68414.m05870 myrosinase-binding protein, putative (F... 25 7.3
At1g52030.1 68414.m05869 myrosinase-binding protein, putative (F... 25 7.3
At1g11430.1 68414.m01313 plastid developmental protein DAG, puta... 25 7.3
At5g60580.3 68418.m07597 zinc finger (C3HC4-type RING finger) fa... 25 9.6
At5g60580.2 68418.m07596 zinc finger (C3HC4-type RING finger) fa... 25 9.6
At5g60580.1 68418.m07595 zinc finger (C3HC4-type RING finger) fa... 25 9.6
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 25 9.6
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 25 9.6
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 25 9.6
At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit (... 25 9.6
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 25 9.6
At4g13730.2 68417.m02131 RabGAP/TBC domain-containing protein lo... 25 9.6
At4g13730.1 68417.m02132 RabGAP/TBC domain-containing protein lo... 25 9.6
At3g60900.1 68416.m06813 fasciclin-like arabinogalactan-protein ... 25 9.6
At3g09640.1 68416.m01143 L-ascorbate peroxidase 1b (APX1b) ident... 25 9.6
At2g44910.1 68415.m05590 homeobox-leucine zipper protein 4 (HB-4... 25 9.6
At2g25540.1 68415.m03057 cellulose synthase, catalytic subunit, ... 25 9.6
At2g03270.1 68415.m00280 DNA-binding protein, putative similar t... 25 9.6
At2g02780.1 68415.m00221 leucine-rich repeat transmembrane prote... 25 9.6
At1g43900.1 68414.m05065 protein phosphatase 2C, putative / PP2C... 25 9.6
>At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identical
to gi|10880497|gb|AAG24278; supported by Ceres cDNA
265772
Length = 127
Score = 32.3 bits (70), Expect = 0.063
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 9 TPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPG 68
TP+ P +++P A VS P+ G P P S P AP + P+A G
Sbjct: 46 TPSITPTPTPTPSATPTAAPVSPPA--GSPLPSSASPPAPPTSLTPDGAPVA--GPTGST 101
Query: 69 PASYNTEGMTAKGMINTFIVVFIMTL 94
P N A G + F+ V + L
Sbjct: 102 PVDNNNAATLAAGSLAGFVFVASLLL 127
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 31.1 bits (67), Expect = 0.15
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 10 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPG- 68
P+ + P +SSP P VVS P PPP +P T P IA P
Sbjct: 42 PSPPQSPPPVVSSSPPPPVVSSPPPSSSPPPSPPVITSPPPTVASSPPPPVVIASPPPST 101
Query: 69 PAS 71
PA+
Sbjct: 102 PAT 104
>At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 31.1 bits (67), Expect = 0.15
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 9 TPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQK 55
+P K+R A +SS P S P KP P + K P G+K
Sbjct: 39 SPKKKRTKTVASSSSSSPKSASKPKYTKKPDPNAPKITRPCTECGRK 85
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 31.1 bits (67), Expect = 0.15
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 10 PTKRRGPIAAEA-SSPGPAVVSLPSLIGKPPPESRKPRAP 48
PT P + A SSP PA+ SLP + PPP P P
Sbjct: 32 PTDSAPPPSPPADSSPPPALPSLPPAVFSPPPTVSSPPPP 71
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 23 SPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 69
+P P + P I PPPES P F + P A+ ++ P P
Sbjct: 95 APPPIPIVFPPPIDSPPPESTNSPPPPEVF-EPPPPPADEDESPPAP 140
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 30.3 bits (65), Expect = 0.26
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 5 QNPWTPTKRRGPIAAEA---SSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLAN 61
Q+P TP GP +AEA SSP P + L L PPP P + + +
Sbjct: 537 QSP-TPVHSNGPPSAEAAVTSSPLPPLKPLRILSRPPPPPPPPPISSLRSTPSPSSTSNS 595
Query: 62 IAKAGPGP 69
IA GP P
Sbjct: 596 IATQGPPP 603
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.9 bits (64), Expect = 0.34
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Query: 11 TKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
TKRR P A +SP P V S P PPP P P
Sbjct: 513 TKRRSPPPAPVNSPPPPVYSPP----PPPPPVHSPPPP 546
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 23 SPGPAVVSLPSLIGKPPPESRKPRAPA 49
SP P V S P + PPP P PA
Sbjct: 574 SPPPPVYSPPPPVHSPPPPVHSPPPPA 600
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/46 (32%), Positives = 16/46 (34%)
Query: 3 VRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
V P P P SP P V S P + PPP P P
Sbjct: 547 VHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPPP 592
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 7 PWTPTKRRGPI-AAEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
P TP P+ A P P V S P +PP ES +P P
Sbjct: 465 PTTPVHEPSPVLATPVDKPSP-VPSRPVQKPQPPKESPQPDDP 506
>At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identical
to gi_3883128_gb_AAC77827
Length = 133
Score = 29.9 bits (64), Expect = 0.34
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 15/98 (15%)
Query: 7 PWTPTKRRGPIAAEASSPGPAVVSLPSL------IGKPPPESRKPRAPAFTFGQKLDPLA 60
P TPT + P A A +P P+ PS + +PP ES P AP + P
Sbjct: 34 PATPTPSQSP-RATAPAPSPSANPPPSAPTTAPPVSQPPTES--PPAPPTSTSPSGAPGT 90
Query: 61 NIAKAGPGPA------SYNTEGMTAKGMINTFIVVFIM 92
N+ GPA S N ++ ++ TF V ++
Sbjct: 91 NVPSGEAGPAQSPLSGSPNAAAVSRVSLVGTFAGVAVI 128
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 29.5 bits (63), Expect = 0.45
Identities = 20/66 (30%), Positives = 24/66 (36%)
Query: 5 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAK 64
Q P PT + P A + P P S P + PP KP P + Q P
Sbjct: 52 QPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAIT 111
Query: 65 AGPGPA 70
P PA
Sbjct: 112 PPPPPA 117
>At3g10525.1 68416.m01263 expressed protein
Length = 128
Score = 29.5 bits (63), Expect = 0.45
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 22 SSPGPAVVSLPSLIGKPPPESRKPRAP 48
S+P +P+++ PPP RKPR P
Sbjct: 42 STPTSQEHKIPAVVDSPPPPPRKPRPP 68
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 29.1 bits (62), Expect = 0.59
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 30 SLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKGMINTFIVV 89
S PS P P + + AP+ T G D +N+ A PG + + G G N +
Sbjct: 90 SAPSSAPPPAPAASQTTAPSVTRGVGSDNSSNLGGASPGESLFPGLGFNPLGGGNAMSGL 149
Query: 90 F 90
F
Sbjct: 150 F 150
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 28.7 bits (61), Expect = 0.78
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 7 PWTPTKRRGPIAAEASSPG--PAVVSLPSLIGKPPPESRKPRAP 48
P PT + I+A SSP PA LP+ PPP + P P
Sbjct: 737 PAPPTPQSNGISAMKSSPPAPPAPPRLPTHSASPPPPTAPPPPP 780
>At4g32640.1 68417.m04646 sec23/sec24 transport protein-related
Length = 1069
Score = 28.7 bits (61), Expect = 0.78
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Query: 2 GVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAF--TFGQKLD-- 57
G Q +P R GP A A GP VS P+ P +R P+ +FG +
Sbjct: 76 GAPQRGPSPMSRPGPPAGMARPGGPPPVSQPAGFQSNVPLNRPTGPPSRQPSFGSRPSMP 135
Query: 58 --PLANIAKAGPGPASYNTEGMTAKG 81
P+A A + G ++ G A G
Sbjct: 136 GGPVAQPAASSSGFPAFGPSGSVAAG 161
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 28.7 bits (61), Expect = 0.78
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 22 SSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTE 75
SSP P V P+ PPP+ + +P + P + P P Y T+
Sbjct: 563 SSPPPVVNCPPTTQSPPPPKYEQTPSPREYYPSPSPPYYQYTSSPPPPTYYATQ 616
Score = 25.8 bits (54), Expect = 5.5
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 7/71 (9%)
Query: 7 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTF-----GQKLDPLAN 61
P P+ + P A+ P P+ PS PPP S K +P+F K+ P
Sbjct: 441 PPPPSSKMSP-TFRATPPPPSSKMSPSFRATPPPPSSK-MSPSFRATPPPPSSKMSPSVK 498
Query: 62 IAKAGPGPASY 72
P P Y
Sbjct: 499 AYPPPPPPPEY 509
>At4g32490.1 68417.m04625 plastocyanin-like domain-containing
protein
Length = 221
Score = 28.3 bits (60), Expect = 1.0
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 23 SPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPL-ANIAKAGPGPASY--NTEGMTA 79
SP + V L P P + +PA T G +DP + + PGPA+ N G A
Sbjct: 146 SPSASPVRKALLSPAPIPVHKALSSPAPTPG--VDPSHSEVLAPAPGPAAAVRNLAGSVA 203
Query: 80 KGMINTFIVVFIM 92
G+I+ +V+ IM
Sbjct: 204 PGVISLGLVLVIM 216
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 8 WTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
W T G A + SP + S PS PPP +K P
Sbjct: 61 WKCTYSNGSAPAISISPSTPIPSTPSTPSPPPPAPKKSPPP 101
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 10 PTKRRGPIAAEASS-PGPAVVSLPSLIGKPPPESRKPRAP 48
PT ++ P S P PA PS PPP +K P
Sbjct: 120 PTPKKSPSPPPTPSLPPPAPKKSPSTPSLPPPTPKKSPPP 159
>At1g27950.1 68414.m03424 lipid transfer protein-related low
similarity to lipid transfer protein Picea abies
GI:2627141; contains Pfam profile: PF00234: Protease
inhibitor/seed storage/LTP family
Length = 193
Score = 28.3 bits (60), Expect = 1.0
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 27 AVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKGMINTF 86
++ + P L+G P P A FT P+A K+ PA+ +G +A
Sbjct: 112 SITNCPKLLGISPSS---PDAAVFTNNATTTPVAPAGKSPATPATSTDKGGSASAKDGHA 168
Query: 87 IVVFIMTLKTVVF 99
+V + L V F
Sbjct: 169 VVALAVALMAVSF 181
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/44 (34%), Positives = 18/44 (40%)
Query: 6 NPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 49
NP TP P+A S P PS PPP+ + PA
Sbjct: 2 NPPTPDPSPKPVAPPGPSSKPVAPPGPSPCPSPPPKPQPKPPPA 45
Score = 25.0 bits (52), Expect = 9.6
Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 4/59 (6%)
Query: 7 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPR---APA-FTFGQKLDPLAN 61
P P P+ P PA P+ KP P KP PA F FG + N
Sbjct: 102 PKPPAPTPKPVPPHGPPPKPAPAPTPAPSPKPAPSPPKPENKTIPAVFFFGDSVFDTGN 160
>At5g37940.1 68418.m04570 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P1 [SP|Q39172][gi:886428],
Arabidopsis thaliana
Length = 353
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 35 IGKPPPESRKPRAPAFTFGQKLDPLANIAKA-GPGPASYNT 74
+GKP P S+ A AFT G+ + +AKA G +Y T
Sbjct: 65 MGKPDPSSQASMAHAFTIGKPISGF-GVAKAIDSGHPNYKT 104
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/63 (30%), Positives = 25/63 (39%)
Query: 23 SPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKGM 82
SP P V S P + PPP S P F P+ + A A+ T + G
Sbjct: 787 SPPPPVHSPPPPVHSPPPPSPIYSPPPPVFSPPPKPVTPLPPATSPMANAPTPSSSESGE 846
Query: 83 INT 85
I+T
Sbjct: 847 IST 849
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 6 NPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
+P +P P SP P V S P + PPP P P
Sbjct: 638 SPQSPPVHSPPPPPPVHSPPPPVFSPPPPMHSPPPPVYSPPPP 680
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Query: 10 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
P P SP P V S P + PPP P P
Sbjct: 678 PPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPP 716
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Query: 10 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
P P SP P V S P + PPP P P
Sbjct: 760 PPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPP 798
>At1g37140.1 68414.m04640 RNA-binding protein, putative similar to
terminal ear1 GI:3153237 from [Zea mays]
Length = 233
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 37 KPPPESRKPRAPAFTFGQKLDPLANIAKAGP 67
K P +S P APAFT + PL N K P
Sbjct: 4 KKPTKSLNPYAPAFTPPSRSPPLFNFNKPFP 34
>At5g25270.1 68418.m02996 expressed protein
Length = 540
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Query: 3 VRQNPWTP---TKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
+R W P T +R + +PG + S PS P P +R P P
Sbjct: 301 IRTGSWVPASGTNQREESTTQ-QTPGQTIPSTPSSTTDPAPSTRGPSEP 348
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 5 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPP-ESRKPRAPA 49
Q P +P ++ SP PA S P PPP + P APA
Sbjct: 99 QPPQSPPASAPTVSPPPVSPPPAPTSPPPTPASPPPAPASPPPAPA 144
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/42 (28%), Positives = 14/42 (33%)
Query: 7 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
P PT P P ++ P G PP S P P
Sbjct: 559 PSPPTPSTPPTPISPGQNSPPIIPSPPFTGPSPPSSPSPPLP 600
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 7 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
P PT P + P P V P + PPP + P AP
Sbjct: 122 PPPPTPYTPPPPTPYTPPPPTVKPPPPPVVTPPPPTPTPEAP 163
>At1g49340.2 68414.m05531 phosphatidylinositol 3- and 4-kinase family
protein contains similarity to phosphatidylinositol
4-kinase 230 GI:2326227 from [Homo sapiens], from [Bos
taurus] GI:2198791; contains Pfam profiles PF00454:
Phosphatidylinositol 3- and 4-kinase, PF00613:
Phosphoinositide 3-kinase family, accessory domain
Length = 2028
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 8 WTPTKRRGPIAAEASSPGPAVVSLPSLI-GKP--PPES 42
WT +RG A++ GPA P L G+P PPES
Sbjct: 1232 WTIDTKRGLFASDVRYSGPAAKLRPHLSPGEPEDPPES 1269
>At1g49340.1 68414.m05530 phosphatidylinositol 3- and 4-kinase family
protein contains similarity to phosphatidylinositol
4-kinase 230 GI:2326227 from [Homo sapiens], from [Bos
taurus] GI:2198791; contains Pfam profiles PF00454:
Phosphatidylinositol 3- and 4-kinase, PF00613:
Phosphoinositide 3-kinase family, accessory domain
Length = 2028
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 8 WTPTKRRGPIAAEASSPGPAVVSLPSLI-GKP--PPES 42
WT +RG A++ GPA P L G+P PPES
Sbjct: 1232 WTIDTKRGLFASDVRYSGPAAKLRPHLSPGEPEDPPES 1269
>At5g38000.1 68418.m04576 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P1 [SP|Q39172][gi:886428] and
P2 [SP|Q39173][gi:886430], Arabidopsis thaliana
Length = 353
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 35 IGKPPPESRKPRAPAFTFGQKLDPLANIAKA-GPGPASYNT 74
+GKP P S A AFT G+ + +AKA G +Y T
Sbjct: 65 MGKPDPSSPASMAHAFTIGKPISGF-GVAKAIDSGHPNYKT 104
>At4g34150.1 68417.m04846 C2 domain-containing protein similar to
calcium-dependent protein kinase [Dunaliella
tertiolecta] GI:6644464; contains Pfam profile PF00168:
C2 domain
Length = 247
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 19 AEASSPGPAVVSLPSLIGKPP-PESRKPRAPAFTF-GQKLDPLANIAKAGPGPASY 72
A P P+ PS G PP P + P P+ + Q P + GP P Y
Sbjct: 187 ASGYPPQPSAYPPPSTSGYPPIPSAYPPPPPSSAYPPQPYPPQPSYYPQGPYPGQY 242
>At3g17900.1 68416.m02280 expressed protein
Length = 838
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 18 AAEASSPGPAVVSLPSLIGKPPPESRKP 45
+A +++ P V+ P+ +PPPE+ KP
Sbjct: 7 SASSATHRPPVIEPPATPPQPPPETAKP 34
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 6 NPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRA 47
NP P P + ++P P V S P + PPP + P A
Sbjct: 69 NPPPPVSSPPPASPPPATP-PPVASPPPPVASPPPATPPPVA 109
Score = 25.0 bits (52), Expect = 9.6
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 7 PWTPTKRRGPIAAE---ASSPGPAVVSLPSLIGKPPPESRKP 45
P PT P AA S+P P S P + PPP + P
Sbjct: 31 PAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPP 72
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 6 NPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRA 47
NP P P + ++P P V S P + PPP + P A
Sbjct: 69 NPPPPVSSPPPASPPPATP-PPVASPPPPVASPPPATPPPVA 109
Score = 25.0 bits (52), Expect = 9.6
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 7 PWTPTKRRGPIAAE---ASSPGPAVVSLPSLIGKPPPESRKP 45
P PT P AA S+P P S P + PPP + P
Sbjct: 31 PAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPP 72
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 10 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 69
PT + ++ ++ P VS P KP P S+ P P F P A + P P
Sbjct: 519 PTTSKPFVSQPPNTSKPMPVSQPPTTSKPLPVSQPP--PTFQSTCPSQPPAASSSLSPLP 576
Query: 70 ASYNT 74
+N+
Sbjct: 577 PVFNS 581
>At5g44190.1 68418.m05407 myb family transcription factor (GLK2)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 386
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 8 WTPTKRRGPIAAEASSPGPAVVSLP-SLIGKPPPESRKPRAP 48
W K P +A + P PA+ + P S G PP ++P P
Sbjct: 266 WPKHKPNTPASAHRTYPMPAIAAAPASWPGHPPYWHQQPLYP 307
>At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1
(MSH6-1) (AGAA.3) identical to SP|O04716 DNA mismatch
repair protein MSH6-1 (AtMsh6-1) cress] {Arabidopsis
thaliana}
Length = 1324
Score = 25.8 bits (54), Expect = 5.5
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 15 GPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPAS 71
G A+ +SSP P+ PSL K P+S P + + P K P P+S
Sbjct: 26 GKSASSSSSPSPS--PSPSLSNKKTPKSNNPNPKSPS--PSPSPPKKTPKLNPNPSS 78
>At3g15600.1 68416.m01976 hypothetical protein low similarity to KED
[Nicotiana tabacum] GI:8096269; contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 591
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 10 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAF 50
P+K+RG + P VV P ++ K ESR P +
Sbjct: 535 PSKKRGKAHEDGDDPSEEVVKKPKVV-KKLAESRTDAKPVY 574
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 23 SPGPAVVSLPSLIGKPPPESRKPRAPAFT 51
SP P V S P + PPP P P ++
Sbjct: 558 SPPPPVHSPPPPVHSPPPPVHSPPPPVYS 586
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 23 SPGPAVVSLPSLIGKPPPESRKPRAPAFT 51
SP P V S P + PPP P P ++
Sbjct: 624 SPPPPVFSPPPPVHSPPPPVYSPPPPVYS 652
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 22 SSPGPAVVSLPSLIGKPPPESRKPRAPAFT 51
S P P V S P + PPP P P ++
Sbjct: 586 SPPPPPVHSPPPPVHSPPPPVHSPPPPVYS 615
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/64 (23%), Positives = 24/64 (37%)
Query: 6 NPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKA 65
NP P P ++SS + + P + PP S P P + +P + +
Sbjct: 99 NPNPPESSSNPNPPDSSSNPNSNPNPPVTVPNPPESSSNPNPPDSSSNPNSNPNPPESSS 158
Query: 66 GPGP 69
P P
Sbjct: 159 NPNP 162
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 7 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRA 47
P TP + P+ A P P LP+ I PPP PRA
Sbjct: 494 PPTPPAFK-PLKGSAPPPPPPP-PLPTTIAAPPPPPPPPRA 532
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 10 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKP 45
P P +S P P V S P + PPP S P
Sbjct: 554 PPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSPPP 589
>At1g17790.1 68414.m02202 DNA-binding bromodomain-containing protein
similar to SP|P13709 Female sterile homeotic protein
(Fragile-chorion membrane protein) {Drosophila
melanogaster}; contains Pfam profile PF00439:
Bromodomain
Length = 487
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 19 AEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
A A S P V LP+++ P P S P P
Sbjct: 254 APAPSIAPIVEPLPAIVPSPSPSSPPPPPP 283
>At1g10460.1 68414.m01178 germin-like protein (GLP7) identical to
germin-like protein subfamily 1 member 1 [SP|P92998];
similar to ESTs gb|T88481 and gb|AI099566
Length = 217
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 21 ASSPGPAVVSLPSLIGKPP 39
+ +PG +VSL S I KPP
Sbjct: 173 SQNPGTQIVSLSSFISKPP 191
>At1g07240.1 68414.m00770 UDP-glucoronosyl/UDP-glucosyl
transferase family protein contains Pfam profile:
PF00201 UDP-glucoronosyl and UDP-glucosyl transferase
Length = 480
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 7 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPP 39
P+ P + AS PG ++SLP + PP
Sbjct: 45 PYAPHADASLASLTASEPGIRIISLPEIHDPPP 77
>At5g08200.1 68418.m00959 peptidoglycan-binding LysM
domain-containing protein contains Pfam profile
PF01476: LysM domain
Length = 409
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 20 EASSPGPAVVSLPSLIGKPPPESRKP 45
E S P ++ +PS PPP S P
Sbjct: 40 EKSPPRSKILRIPSPTSSPPPSSSSP 65
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 16 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPL 59
P + P P V S P PP S P +P++++ P+
Sbjct: 393 PPCPDVYKPPPYVYSSPPPYVYNPPPSSPPPSPSYSYSSPPPPI 436
>At3g61260.1 68416.m06856 DNA-binding family protein / remorin
family protein similar to DNA-binding protein gi|601843
[Arabidopsis thaliana], remorin [Solanum tuberosum]
GI:1881585; contains Pfam profiles PF03763: Remorin
C-terminal region, PF03766: Remorin N-terminal region
Length = 212
Score = 25.4 bits (53), Expect = 7.3
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 11/76 (14%)
Query: 9 TPTKRRGPIAAEASSPGPAVVSLPSLIGK---------PPPESRKPRAPAFTFGQKLDPL 59
TP P A A P PA P+ + K PPPE + A T +K P+
Sbjct: 19 TPAPADTPAPAPAEIPAPAPAPTPADVTKDVAEEKIQNPPPEQIFDDSKALTVVEK--PV 76
Query: 60 ANIAKAGPGPASYNTE 75
A A P AS + +
Sbjct: 77 EEPAPAKPASASLDRD 92
>At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 300
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/46 (28%), Positives = 17/46 (36%)
Query: 3 VRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
+ Q P P + + P P V+ P PPP P AP
Sbjct: 25 INQPPPPPPQSQPPPPQTQQQTYPPVMGYPGYHQPPPPYPNYPNAP 70
>At3g24540.1 68416.m03082 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 509
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 19 AEASSPGPAVVSLPS-LIGKPPPESRKP 45
+ ASSP P V +P L +PPP + P
Sbjct: 37 SSASSPPPPQVFVPEPLFSEPPPPPKAP 64
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 16 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPL 59
P++ +P P+V S P+ PPP + P P+ T DP+
Sbjct: 132 PVSPPPPTPTPSVPS-PTPPVSPPPPTPTPSVPSPTPPVPTDPM 174
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 25.4 bits (53), Expect = 7.3
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 4 RQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGK--PPPESRKPRAPAFTFGQKLDPLA 60
R P PT P+AA + P +P+ I P P+S + +GQ LA
Sbjct: 124 RPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASNLA 182
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 25.4 bits (53), Expect = 7.3
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 4 RQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGK--PPPESRKPRAPAFTFGQKLDPLA 60
R P PT P+AA + P +P+ I P P+S + +GQ LA
Sbjct: 124 RPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASNLA 182
>At2g24030.2 68415.m02870 expressed protein and genefinder
Length = 374
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 12 KRRGPIAAEASSPGPAVVSL-PSLIGKPPPESRKPRAPAFTFGQKLDPLA 60
K + + + +P A SL P+ + P PE+ + A GQK+D +A
Sbjct: 236 KHKAAVTQQNETPEAASTSLSPASVTAPQPEAIRVCENANPQGQKVDEIA 285
>At2g24030.1 68415.m02871 expressed protein and genefinder
Length = 455
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 12 KRRGPIAAEASSPGPAVVSL-PSLIGKPPPESRKPRAPAFTFGQKLDPLA 60
K + + + +P A SL P+ + P PE+ + A GQK+D +A
Sbjct: 317 KHKAAVTQQNETPEAASTSLSPASVTAPQPEAIRVCENANPQGQKVDEIA 366
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 10 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPES--RKPRAP 48
PT G +++ +S P PAV P +G P ++ + PR P
Sbjct: 247 PTPLAGWMSSPSSVPHPAVSGGPIALGAPSIQAALKHPRTP 287
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 10 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPES--RKPRAP 48
PT G +++ +S P PAV P +G P ++ + PR P
Sbjct: 247 PTPLAGWMSSPSSVPHPAVSGGPIALGAPSIQAALKHPRTP 287
>At1g52030.2 68414.m05870 myrosinase-binding protein, putative
(F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
protein-like f-AtMBP [Arabidopsis thaliana]; similar to
myrosinase binding protein GI:1711295 from [Brassica
napus]; contains Pfam PF01419: Jacalin-like lectin
domain; identical to cDNA myrosinase-binding
protein-like protein (MBP1.2) GI:6760446
Length = 642
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 16 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFT 51
P+ A +P PA P+ P P S APA T
Sbjct: 291 PLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAPT 326
>At1g52030.1 68414.m05869 myrosinase-binding protein, putative
(F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
protein-like f-AtMBP [Arabidopsis thaliana]; similar to
myrosinase binding protein GI:1711295 from [Brassica
napus]; contains Pfam PF01419: Jacalin-like lectin
domain; identical to cDNA myrosinase-binding
protein-like protein (MBP1.2) GI:6760446
Length = 642
Score = 25.4 bits (53), Expect = 7.3
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 16 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFT 51
P+ A +P PA P+ P P S APA T
Sbjct: 291 PLPAPTPAPAPAPAPAPAPAPSPAPASAPVPAPAPT 326
>At1g11430.1 68414.m01313 plastid developmental protein DAG,
putative similar to DAG protein, chloroplast precursor
[Garden snapdragon] SWISS-PROT:Q38732
Length = 232
Score = 25.4 bits (53), Expect = 7.3
Identities = 9/11 (81%), Positives = 9/11 (81%)
Query: 36 GKPPPESRKPR 46
G PPPE RKPR
Sbjct: 213 GPPPPEQRKPR 223
>At5g60580.3 68418.m07597 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 487
Score = 25.0 bits (52), Expect = 9.6
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 9 TPTKRRGPIAAEASSPGPAVVSLPSL-IGKPPPESRKPRA 47
+PT RR A +SSPGP S L GK ++ P+A
Sbjct: 73 SPTPRRVNFALTSSSPGPTPTSSSVLPRGKSSLKNLLPKA 112
>At5g60580.2 68418.m07596 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 494
Score = 25.0 bits (52), Expect = 9.6
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 9 TPTKRRGPIAAEASSPGPAVVSLPSL-IGKPPPESRKPRA 47
+PT RR A +SSPGP S L GK ++ P+A
Sbjct: 73 SPTPRRVNFALTSSSPGPTPTSSSVLPRGKSSLKNLLPKA 112
>At5g60580.1 68418.m07595 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 487
Score = 25.0 bits (52), Expect = 9.6
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 9 TPTKRRGPIAAEASSPGPAVVSLPSL-IGKPPPESRKPRA 47
+PT RR A +SSPGP S L GK ++ P+A
Sbjct: 73 SPTPRRVNFALTSSSPGPTPTSSSVLPRGKSSLKNLLPKA 112
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 25.0 bits (52), Expect = 9.6
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 6 NPWTPTKR-RGPIA--AEASSPGPAVVSLPSLIGKPPPESRK 44
+P P KR RGP SP P S P PPP ++K
Sbjct: 149 SPSRPPKRSRGPPRPPTRPKSPPPRKSSFPPSRSPPPPPAKK 190
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 25.0 bits (52), Expect = 9.6
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 6 NPWTPTKR-RGPIA--AEASSPGPAVVSLPSLIGKPPPESRK 44
+P P KR RGP SP P S P PPP ++K
Sbjct: 149 SPSRPPKRSRGPPRPPTRPKSPPPRKSSFPPSRSPPPPPAKK 190
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 25.0 bits (52), Expect = 9.6
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 11/82 (13%)
Query: 5 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLA-NIA 63
Q+P TP+ + SSP P + PS + P AP+ + P A NI
Sbjct: 287 QSPATPSPMTPQSPSPVSSPSPDQSAAPS-------DQSTPLAPS---PSETTPTADNIT 336
Query: 64 KAGPGPASYNTEGMTAKGMINT 85
P P + + G+ +++T
Sbjct: 337 APAPSPRTNSASGLAVTSVMST 358
>At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit
(Ath-A) identical to gi:2827141
Length = 1084
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 44 KPRAPAFTFGQKLDPLAN 61
+PRAP + F QK+D L N
Sbjct: 427 EPRAPEWYFSQKMDYLKN 444
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 44 KPRAPAFTFGQKLDPL 59
+PRAP F F QK+D L
Sbjct: 425 EPRAPEFYFAQKIDYL 440
>At4g13730.2 68417.m02131 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 408
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/35 (31%), Positives = 13/35 (37%)
Query: 14 RGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
R P A + P P +V P P S P P
Sbjct: 27 RNPAATSITPPSPPIVERPPFSSSPSAISTAPAPP 61
>At4g13730.1 68417.m02132 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 449
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/35 (31%), Positives = 13/35 (37%)
Query: 14 RGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
R P A + P P +V P P S P P
Sbjct: 27 RNPAATSITPPSPPIVERPPFSSSPSAISTAPAPP 61
>At3g60900.1 68416.m06813 fasciclin-like arabinogalactan-protein
(FLA10)
Length = 422
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 16 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 48
P S+P P PS + P P + P AP
Sbjct: 341 PAPEPVSAPTPTPAKSPSPVEAPSPTAASPPAP 373
>At3g09640.1 68416.m01143 L-ascorbate peroxidase 1b (APX1b)
identical to ascorbate peroxidase [Arabidopsis thaliana]
gi|555576|emb|CAA56340;
Length = 251
Score = 25.0 bits (52), Expect = 9.6
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 15 GPIAAEASSPGPAVVSLPSLIGK--PPPESRKPRA 47
G +A E + GP + P + K PPPE R P+A
Sbjct: 102 GVVAVEITG-GPEIPFHPGRLDKVEPPPEGRLPQA 135
>At2g44910.1 68415.m05590 homeobox-leucine zipper protein 4 (HB-4) /
HD-ZIP protein 4 identical to Homeobox-leucine zipper
protein ATHB-4 (HD-ZIP protein ATHB-4) (SP:P92953)
[Arabidopsis thaliana]
Length = 318
Score = 25.0 bits (52), Expect = 9.6
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 10 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKP 45
P+ R +A + P+ + P+++G+P P+ P
Sbjct: 271 PSCERVSSSAATVTAAPSTTTTPTVVGRPSPQRLTP 306
>At2g25540.1 68415.m03057 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1065
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 44 KPRAPAFTFGQKLDPL 59
+PRAP F F QK+D L
Sbjct: 412 EPRAPEFYFSQKIDYL 427
>At2g03270.1 68415.m00280 DNA-binding protein, putative similar to
Swiss-Prot:Q60560 DNA-binding protein SMUBP-2
(Immunoglobulin MU binding protein 2) (SMUBP-2) (Insulin
II gene enhancer-binding protein)(RIPE3B-binding complex
3B2 P110 subunit) (RIP-1)[Mesocricetus auratus];
identical to putative helicase (atpc-2 gene) cDNA
NCBI_gi:11191230
Length = 639
Score = 25.0 bits (52), Expect = 9.6
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 25 GPAVVSLPSLIGKPPPESRKPRAPAFT-FGQKLDPLAN--IAKAGPGPASYNTEGMTAKG 81
GPA +P L G+ P K +FT F + LD I KA + G G
Sbjct: 158 GPASDLVPVLFGERQPSVSKKDVKSFTPFNKNLDQSQKDAITKALSSKDVFLLHGPPGTG 217
Query: 82 MINTFIVVFIMTLK 95
T + + + +K
Sbjct: 218 KTTTVVEIVLQEVK 231
>At2g02780.1 68415.m00221 leucine-rich repeat transmembrane protein
kinase, putative
Length = 753
Score = 25.0 bits (52), Expect = 9.6
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 29 VSLPSLIGKPPPESRKPRA 47
+ LPS +G+ P+++KPR+
Sbjct: 614 IPLPSKVGEERPQAKKPRS 632
>At1g43900.1 68414.m05065 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase type 2C
GI:4336436 from [Lotus japonicus]
Length = 371
Score = 25.0 bits (52), Expect = 9.6
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 6 NPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRA 47
NP P P+ +A+SP P S P+ SR P A
Sbjct: 63 NPSPPPLSVAPLRGDANSPPPESSSSPATKSSLMISSRDPNA 104
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,629,298
Number of Sequences: 28952
Number of extensions: 114294
Number of successful extensions: 565
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 405
Number of HSP's gapped (non-prelim): 191
length of query: 103
length of database: 12,070,560
effective HSP length: 70
effective length of query: 33
effective length of database: 10,043,920
effective search space: 331449360
effective search space used: 331449360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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