GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001177-TA|BGIBMGA001177-PA|IPR000595|Cyclic
nucleotide-binding
         (508 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    24   2.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   8.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   8.8  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 12/53 (22%), Positives = 26/53 (49%)

Query: 285 GAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGESVQI 337
           G  N   ++   + +T+Q K+ +    E   KN+  +K+S+ +   K + + I
Sbjct: 113 GTNNGTNKNMRRLSTTTQNKNDDPSYWEKRRKNNEAAKRSRDARRAKEDEIAI 165


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 9/34 (26%), Positives = 20/34 (58%)

Query: 447 QHYLDKKIPTKKDLFKQFVEDRRWQEFRDQMVDD 480
           ++YL+KK+  +   F + V   R + F++ +V +
Sbjct: 237 RYYLEKKVTRRLHRFTKSVIAERQENFKEIVVPE 270


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 9/34 (26%), Positives = 20/34 (58%)

Query: 447 QHYLDKKIPTKKDLFKQFVEDRRWQEFRDQMVDD 480
           ++YL+KK+  +   F + V   R + F++ +V +
Sbjct: 237 RYYLEKKVTRRLHRFTKSVIAERQENFKEIVVPE 270


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.134    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,216
Number of Sequences: 317
Number of extensions: 4673
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 3
length of query: 508
length of database: 114,650
effective HSP length: 60
effective length of query: 448
effective length of database: 95,630
effective search space: 42842240
effective search space used: 42842240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)