Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001177-TA|BGIBMGA001177-PA|IPR000595|Cyclic
nucleotide-binding
(508 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subun... 44 7e-05
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 39 0.002
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.018
SPAC11E3.11c |||guanyl-nucleotide exchange factor |Schizosacchar... 32 0.16
SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase |Schizo... 32 0.22
SPAC3C7.05c |mug191||alpha-1,6-mannanase |Schizosaccharomyces po... 31 0.29
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 31 0.50
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 30 0.66
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 30 0.87
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 29 1.5
SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+ antip... 29 2.0
SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb... 29 2.0
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 28 2.7
SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit Ssr3|Schizos... 28 3.5
SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces pomb... 27 4.7
SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|c... 27 6.2
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 27 6.2
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 8.1
>SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subunit
Cgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 412
Score = 43.6 bits (98), Expect = 7e-05
Identities = 41/213 (19%), Positives = 92/213 (43%), Gaps = 8/213 (3%)
Query: 57 RRVQQAMRGKPKKKQLLSINHVKKKLAAVTYFKYYGPCRTIVRQHQDAHALYFIVSGEVT 116
+R+++++ G K L H + L A+T + ++ Q Y + GE
Sbjct: 132 KRLKRSVAGNFLFKNL-DEEHYNEVLNAMTEKRIGEAGVAVIVQGAVGDYFYIVEQGEFD 190
Query: 117 VTQ-----MVFDELLQQYVSIEIGVMQSGDLFGEVSLLHGIPRTATVTT-VGHCELLALM 170
V + + +E+L I + G+ FGE++L++ PR A+V + + + AL
Sbjct: 191 VYKRPELNITPEEVLSSGYGNYITTISPGEYFGELALMYNAPRAASVVSKTPNNVIYALD 250
Query: 171 KEDFKNVLQASVQKQWDEVKRAMSAFTYFDGLDEVARREGCIVAKMKSYEQNETLLGDGV 230
+ F+ ++ + +Q + + LD+ R++ + Y+ ++ G
Sbjct: 251 RTSFRRIVFENAYRQRMLYESLLEEVPILSSLDKYQRQKIADALQTVVYQAGSIVIRQG- 309
Query: 231 GVANFVYFVLSGRCQMIESIQVVVTTRLGRDFY 263
+ N Y + G +++++ + VV T D++
Sbjct: 310 DIGNQFYLIEDGEAEVVKNGKGVVVTLTKGDYF 342
Score = 33.9 bits (74), Expect = 0.054
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 79 KKKLAAVTYFKYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQ 138
++K+A Y ++RQ + Y I GE E+++ + + +
Sbjct: 287 RQKIADALQTVVYQAGSIVIRQGDIGNQFYLIEDGEA--------EVVKNGKGVVV-TLT 337
Query: 139 SGDLFGEVSLLHGIPRTATVTTVGHCELLALMKEDFKNVLQASVQKQWDEVKRAM 193
GD FGE++L+H R ATV +L K F +L ++ ++ + M
Sbjct: 338 KGDYFGELALIHETVRNATVQAKTRLKLATFDKPTFNRLLGNAIDLMRNQPRARM 392
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 38.7 bits (86), Expect = 0.002
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 291 RESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGESVQISVDGPEIIELSAS 350
+ES D + S + +++ T SIL N++ + GN+ + + P L
Sbjct: 376 KESSDRKDGISGQNKLQQFATISILNNTNATSHL----GNQSVRERAPEESPMTF-LQKK 430
Query: 351 TAAVPSTQENRVLLDPTEQGRNSHRMSVIPEAIVEPLPQNLRTYFMQVCIFNPGSSFGF- 409
AA+P++ R +L PT Q +NS ++P+ + + ++ T Q F+ S
Sbjct: 431 MAALPTSSPVRPMLKPTLQLQNSPLSKLVPQEVGNKVNDSIHTTSNQPSKFSLNPSISLK 490
Query: 410 GENMRDRRI 418
G+N+ ++ +
Sbjct: 491 GDNVIEKNL 499
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.5 bits (78), Expect = 0.018
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 292 ESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGESVQISVD---GPEIIELS 348
+SR+S STS + I T S+ +NS LSK ++ E + ++ D PE + +
Sbjct: 17 QSRNSSYSTSSNERIGTPSTISLSENSDLSKLQSTNDFESREDLSLTSDDNNDPEYV-MC 75
Query: 349 ASTAAVPSTQENRVLLDPTEQGRNSHRMS--VIPEAIVEPLPQNLRT 393
+T T+ N LL TEQ R + + V P+ + N RT
Sbjct: 76 YNTVYHQKTKINDKLLSETEQLRKIYPLESRVFPKPTIVKEITNERT 122
>SPAC11E3.11c |||guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 32.3 bits (70), Expect = 0.16
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 279 LDTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKG-ESVQI 337
+D K N+R RDS R+SI R+ + SI K++S + + + N G + ++
Sbjct: 264 VDPKVSPYGNSRTPLRDSSNYLRDRRSINRQSSLSIPKSTSETTRKTLALSNGGIDQSRV 323
Query: 338 SVDGPEIIELSASTAAV 354
S D ++ + SA AA+
Sbjct: 324 SSDSFKVDDSSAKMAAI 340
>SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 31.9 bits (69), Expect = 0.22
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 425 DCMLLPKIWLLQRNTANIWTRIQHYLDKKIPTKKDLFKQFVEDRRWQEFRDQMVDDVVSR 484
D LPK++ + ++ + +IPT++D F ++ +RW E +D+++D ++
Sbjct: 249 DAFSLPKLFFEGVPIKRLHIHVRRFPISEIPTEEDQFTDWLY-QRWYE-KDKLIDTLLET 306
Query: 485 SNTVNWTSVHDVPYSIRMEEMLDI 508
N +H ++R++ L+I
Sbjct: 307 GNFPGPKKLHT---TVRLKHRLEI 327
>SPAC3C7.05c |mug191||alpha-1,6-mannanase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 31.5 bits (68), Expect = 0.29
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 174 FKNVLQASVQKQWDEVKRAMSAFTYFDGLDEVARREGCIVA 214
F++V QA ++K W V A AF YF+G D+V + VA
Sbjct: 71 FEHVFQA-LKKYWSPVFNACCAFHYFEGNDDVYYDDNAQVA 110
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 30.7 bits (66), Expect = 0.50
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Query: 253 VVTTRLGRDFYSLYDPYIPPDESEQDLDTKYFGAYNNRRESRDSVESTSQRKSIERKRTE 312
++ G+D Y +P DE+E DL +YF A +++ ++ S+ K RK T
Sbjct: 345 IMDENYGKDVYKHGISNVPDDENEDDLQ-RYFTALEMQQDQKEQ-HKKSKNKDPFRKITH 402
Query: 313 SIL---KNSS------LSKQSKHSEGNKGESVQISVDGPEIIELS-ASTAAVPSTQENRV 362
L K S+ +S +SK S N +S + S AST+AV + +E ++
Sbjct: 403 PSLHLGKFSTPKLIKRMSLRSKKSLRNDSKSDDVGNSTHRFSTASAASTSAVKTEKEKKM 462
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 30.3 bits (65), Expect = 0.66
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 343 EIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVIPEAI---VEPLPQNLRTYFMQ-- 397
+I+ L+ + S + R +L+ R SHRMS++P + +E + LR +
Sbjct: 393 DILYLNGKSLVKYSLESRRRILEKVIV-RESHRMSILPYKVGSTIEDIEAELRNVIQEGS 451
Query: 398 --VCIFNPGSSFGFGENMRD 415
+ I P S+ GE M D
Sbjct: 452 EGLVIKKPSGSYHLGERMDD 471
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 29.9 bits (64), Expect = 0.87
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 277 QDLDTKYFGAYNNRRESRDSVESTSQRK--SIERKRTESILKNSSLSKQSKHSEGNKGES 334
Q+L + A + +S DSV+S+++ SI+R++TES NS S S +SE + ES
Sbjct: 105 QELLRQTLEADEDASDSDDSVDSSNKNSEVSIKRRKTES---NSQESVDSSNSESSDEES 161
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 29.1 bits (62), Expect = 1.5
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 281 TKYFGAYNNRRES--RDSVESTSQRKSIERKRTESILKNSSLSKQSKHSE--GNKGESVQ 336
T F A+ N + D VE S RKS + +R+ S SSLS S+ S N +S+
Sbjct: 449 TAVFEAFENLAQQYFTDGVEMRSVRKSSDLRRSLSAASLSSLSDSSRRSSSAANPFQSMS 508
Query: 337 IS 338
I+
Sbjct: 509 IT 510
>SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+
antiporter Sod22|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 28.7 bits (61), Expect = 2.0
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 13/98 (13%)
Query: 288 NNR-RESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGESVQISVDGPEIIE 346
N+R R SR + ES + S+ER+R E +L N S ES ++ P I+
Sbjct: 645 NHRPRYSRQNSESHLRENSVERRRREQVLTNIGDS-----------ESEDDNIPRPGIVP 693
Query: 347 LSASTAAVPSTQENRVLLDPTEQGRNSHRMSVIPEAIV 384
S N +L D + R S R S P A V
Sbjct: 694 FYNENNESSSDTRNGLLSDNVSESR-SRRPSRAPSAAV 730
>SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1066
Score = 28.7 bits (61), Expect = 2.0
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 279 LDTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLS-KQSKHSEGNKGESVQI 337
LD K GA + + V + T IL+ SS + K+ + S GN+G S
Sbjct: 415 LDQKQLGADEKPKYAGHVVAVLQRAPGQVFSGTLGILRPSSAANKERQTSSGNQGSSNNS 474
Query: 338 SVDGPEIIELSASTAAVP 355
D P+I+ S VP
Sbjct: 475 GNDKPKIVWFKPSDKRVP 492
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 28.3 bits (60), Expect = 2.7
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 25 KCLFRALGRL---VMANAHWLIEDSENYEGLENVKRRV----QQAMRGKPKKKQLLSINH 77
+C+F++LG + + L ++++ EG + ++V Q AM ++++ S
Sbjct: 458 QCIFKSLGVFNYELKEDNDDLCTENDSSEGDSDSLKKVDFLGQIAMMSATDREEVKSSIV 517
Query: 78 VKKKLAAVTYFK------YYGPCRTIVRQHQDAHALYFIVSGEVTVT 118
V K + + F +Y TIVRQ A LY+I+ G + T
Sbjct: 518 VSTKKSTILEFAKEIEIIFYKKGTTIVRQGDHADGLYYIIDGFLDAT 564
>SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit
Ssr3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 277 QDLDTKYFGAYNNRR-ESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGE 333
QDL+ K +R + +DS+ S + I R S + N S ++ ++ E N G+
Sbjct: 51 QDLERKLDSLIVRKRFDLQDSLSRNSHKTRILRMYIHSTVANQSWQQKGENQENNSGD 108
>SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 27.5 bits (58), Expect = 4.7
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 289 NRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGESVQISVDGPEIIELS 348
++R S + ++ S+ RT K++++SK K + IS+D P I+E +
Sbjct: 31 SKRAPLGSTKQSNAPSSVTVPRTVLGGKSTNISKFISAPSTKKMSPMDISMDSPTILEPN 90
Query: 349 ASTAAVPSTQENRVLLDPTEQGRNSHRMSVIPEAIVEPL 387
+ + + QE L + + R+S + +P + E +
Sbjct: 91 SQGISRSAVQERSKRLSASPR-RSSLTDTPLPNELEEDI 128
>SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 48 NYEGLENVKRRVQQAMRGKPKKKQLLSINHVKKK 81
N E N +R + + KPKK LLS N + KK
Sbjct: 38 NIENFNNQERSDLEHIHSKPKKDSLLSWNILLKK 71
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 27.1 bits (57), Expect = 6.2
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 264 SLYDPYIPPDESEQDLDTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSL--S 321
S+ P PP E+E D+ S D+ + + E KR+ES L S++ +
Sbjct: 625 SILAPSNPPFETESITDSTEIEGIKESFASTDTGLQNNSTATSENKRSESELTMSNVLSN 684
Query: 322 KQSKHSEGNKGESVQIS 338
+ ++ EG++ S Q S
Sbjct: 685 EGDRNEEGSEINSSQPS 701
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 273 DESEQDLDTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQS 324
+E +++L +K A + ++ D+VE + SIE +RT+ L+ + L K +
Sbjct: 919 EERQENLQSKLIAANKDTTQNPDNVE--VEAISIELERTKEKLRMAELEKSN 968
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.134 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,273,039
Number of Sequences: 5004
Number of extensions: 94563
Number of successful extensions: 364
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 353
Number of HSP's gapped (non-prelim): 23
length of query: 508
length of database: 2,362,478
effective HSP length: 76
effective length of query: 432
effective length of database: 1,982,174
effective search space: 856299168
effective search space used: 856299168
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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