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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001177-TA|BGIBMGA001177-PA|IPR000595|Cyclic
nucleotide-binding
         (508 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0393 - 20895485-20895645,20895750-20896358,20896541-208966...    42   0.002
02_02_0246 - 8243584-8243696,8243848-8244415,8244500-8244685,824...    40   0.006
01_01_0777 - 6017131-6017243,6018069-6018339,6018432-6018617,601...    40   0.006
06_01_1005 - 7810210-7810907,7811005-7811080,7811180-7811368,781...    38   0.019
01_06_0066 - 26113761-26114683,26115031-26115106,26115204-261154...    38   0.025
07_01_0542 + 4002542-4003119,4004347-4004404,4004518-4004835,400...    37   0.044
02_02_0453 + 10420585-10421661,10422015-10422146,10422232-104224...    36   0.076
01_06_0759 + 31754616-31754647,31754862-31755077,31755186-317553...    35   0.13 
03_05_0331 - 23233883-23233972,23234099-23234164,23234300-232343...    31   2.2  
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756...    30   3.8  
03_06_0617 - 35124114-35124148,35124243-35124335,35124415-351249...    30   3.8  
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119     30   5.0  
02_04_0003 + 18832467-18832543,18832627-18832849,18832985-188333...    30   5.0  
06_03_0832 + 25190755-25190960,25191869-25191997,25192079-251923...    29   6.6  
06_02_0325 + 14428065-14428799,14428916-14428993,14429607-144298...    29   6.6  
05_05_0179 + 23022985-23023190,23024099-23024227,23024309-230245...    29   6.6  
03_02_0226 - 6569657-6570388,6570461-6570748,6570846-6571303,657...    29   6.6  
01_01_0908 + 7158172-7158356,7159436-7159866,7159953-7161061,716...    29   6.6  
12_01_0533 - 4202835-4203031,4203826-4203995,4204952-4205001,420...    29   8.7  
11_01_0591 - 4694710-4695270                                           29   8.7  
11_01_0587 - 4662277-4662837                                           29   8.7  
10_08_1023 - 22341815-22342042,22342179-22342247,22342717-223428...    29   8.7  
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600...    29   8.7  

>05_04_0393 -
           20895485-20895645,20895750-20896358,20896541-20896616,
           20896729-20896920,20897118-20897438,20897880-20898119,
           20898205-20898522,20898621-20898678,20898778-20898936,
           20900090-20900308,20900400-20900614
          Length = 855

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 5/92 (5%)

Query: 89  KYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQSGDLFGEVSL 148
           +Y  P   ++ Q++    +Y +VSGEV V  +  D   ++ V   +G      +FGEVS 
Sbjct: 410 EYIPPKEDVIVQNEAPDDVYIVVSGEVEV--IYSDGEAEERVVATLGTR---GVFGEVSA 464

Query: 149 LHGIPRTATVTTVGHCELLALMKEDFKNVLQA 180
           L   P++ T+ T   C+LL L +   K  +Q+
Sbjct: 465 LSDRPQSFTLRTRTLCQLLRLRQAALKEAMQS 496


>02_02_0246 -
           8243584-8243696,8243848-8244415,8244500-8244685,
           8244772-8244804,8244901-8244999,8245091-8245330,
           8246130-8246447,8246589-8246646,8246788-8246846,
           8246888-8246960,8247004-8247219,8247326-8247495
          Length = 710

 Score = 39.5 bits (88), Expect = 0.006
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)

Query: 89  KYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQSGDLFGEVSL 148
           +Y+ P   I+ Q++    +Y +VSG V +   +     Q Y  I       G++FGEV  
Sbjct: 385 EYFPPKEDIILQNEGEADVYIVVSGAVNIITTIHGNE-QVYEKIA-----EGEMFGEVGS 438

Query: 149 LHGIPRTATVTTVGHCELLALMKEDFKNVLQ 179
           L  IP+  T  T    +LL + K   + +++
Sbjct: 439 LCNIPQPFTCRTAELSQLLRISKTRLREIIE 469


>01_01_0777 -
           6017131-6017243,6018069-6018339,6018432-6018617,
           6018703-6018735,6018827-6018925,6019042-6019281,
           6019747-6020064,6020197-6020254,6020333-6020389,
           6020577-6020792,6020885-6021000
          Length = 568

 Score = 39.5 bits (88), Expect = 0.006
 Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 8/92 (8%)

Query: 89  KYYGPCRTIVRQHQDAHALYFIVSGEVTV-TQMVFDELLQQYVSIEIGVMQSGDLFGEVS 147
           +YY P   ++ Q++    +Y +VSG V    ++   E +Q+       V+ +G++FGE+ 
Sbjct: 342 EYYPPREVVILQNEAPRDVYILVSGAVEERVEIDGTEKVQE-------VLCNGEIFGEIG 394

Query: 148 LLHGIPRTATVTTVGHCELLALMKEDFKNVLQ 179
           ++  IP+     T+   +LL L     KN+++
Sbjct: 395 VICSIPQPCAFHTIKVSQLLRLNTAVLKNIIK 426


>06_01_1005 -
           7810210-7810907,7811005-7811080,7811180-7811368,
           7811507-7811728,7811906-7812004,7812112-7812192,
           7812384-7812679,7812777-7813116,7813221-7813284,
           7813511-7813735,7816958-7817244
          Length = 858

 Score = 37.9 bits (84), Expect = 0.019
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 89  KYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQSGDLFGEVSL 148
           +++ P   I+ Q      LYF+  G +    +  D   +  + +E         FGE+++
Sbjct: 438 EFFLPGEVILEQGSAVDQLYFVCHGALEGVGIGEDGQEETILMLE-----PESSFGEIAV 492

Query: 149 LHGIPRTATVTTVGHCELLALMKEDFKNVLQ 179
           L  IP+  TV     C LL L K+ F N+L+
Sbjct: 493 LCNIPQPFTVRVCELCRLLRLDKQSFTNILE 523


>01_06_0066 -
           26113761-26114683,26115031-26115106,26115204-26115401,
           26115829-26116014,26116292-26116447,26116486-26116731,
           26116832-26117149,26117235-26117292,26117472-26117837,
           26119300-26119604
          Length = 943

 Score = 37.5 bits (83), Expect = 0.025
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 1/102 (0%)

Query: 82  LAAVTYFKYYGPCRTIVRQHQDAHALYFIVSGEVTV-TQMVFDELLQQYVSIEIGVMQSG 140
           L  VT + Y       V +  +  A YF    +V +  +   D  +    S+ I V  SG
Sbjct: 432 LRTVTEYAYLVLLLDFVFEVSEMKAEYFPPREDVILQNEAPTDFYILVSGSVVIQVATSG 491

Query: 141 DLFGEVSLLHGIPRTATVTTVGHCELLALMKEDFKNVLQASV 182
           ++ GE+ +L   P+  TV T   C+LL L +  F +++Q++V
Sbjct: 492 EVVGEIGVLCYRPQLFTVRTRSLCQLLRLNRTAFLSIVQSNV 533


>07_01_0542 +
           4002542-4003119,4004347-4004404,4004518-4004835,
           4005201-4005446,4005550-4005648,4005912-4006097,
           4006204-4006401,4006521-4006596,4006721-4007637
          Length = 891

 Score = 36.7 bits (81), Expect = 0.044
 Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 17/94 (18%)

Query: 89  KYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQSGDLFGEVSL 148
           +Y+ P   I+ Q++     Y IVSG                 S+  G+ +SGD+ GE+ +
Sbjct: 407 EYFAPREDIILQNEAPADFYIIVSG-----------------SMLAGMAKSGDVVGEIGV 449

Query: 149 LHGIPRTATVTTVGHCELLALMKEDFKNVLQASV 182
           L   P+  T  T   C+LL L +  F  ++Q+++
Sbjct: 450 LCYRPQLFTARTRSLCQLLRLDRAAFLRIIQSNI 483


>02_02_0453 +
           10420585-10421661,10422015-10422146,10422232-10422456,
           10422555-10422680,10422777-10422839,10423214-10423296,
           10424078-10424309,10424421-10424489,10424532-10424731,
           10424819-10424894,10425015-10425081,10425194-10425471,
           10425600-10425787,10426235-10426391,10426496-10426741
          Length = 1072

 Score = 35.9 bits (79), Expect = 0.076
 Identities = 22/84 (26%), Positives = 40/84 (47%)

Query: 97  IVRQHQDAHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQSGDLFGEVSLLHGIPRTA 156
           +V+Q  +    Y + SGE  V  +  ++  +    +          FGE++L++  P  A
Sbjct: 517 VVQQGGEGECFYVVGSGEFEVLAIQEEDGKEVTKVLHRYTADKLSSFGELALMYNKPLQA 576

Query: 157 TVTTVGHCELLALMKEDFKNVLQA 180
           +V  V    L AL +EDF+ +L +
Sbjct: 577 SVRAVTTGTLWALKREDFRGILMS 600


>01_06_0759 +
           31754616-31754647,31754862-31755077,31755186-31755341,
           31755446-31755503,31755618-31755935,31756026-31756265,
           31756345-31756443,31756529-31756561,31756670-31756867
          Length = 449

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)

Query: 89  KYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQSGDLFGEVSL 148
           +Y+ P   I+ Q+     LY +VSG V +  +VF +  +Q           G+L GE+ +
Sbjct: 347 EYFAPKEDIILQNDSPSDLYLLVSGAVDI--LVFLDGTEQVYR----RAAEGELLGEIGV 400

Query: 149 LHGIPRTATVTTVGHCELLALMKEDFKNVLQ 179
           L   P++ T  T    ++L + +     ++Q
Sbjct: 401 LCNKPQSFTFRTTKLSQILRISRTKLLGIIQ 431


>03_05_0331 -
           23233883-23233972,23234099-23234164,23234300-23234365,
           23234451-23234675,23234794-23235279
          Length = 310

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 5/94 (5%)

Query: 295 DSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNK-----GESVQISVDGPEIIELSA 349
           DS+ ++++RK  E+ R +   K+   +K++    G K     GE   I+V   + +    
Sbjct: 141 DSIGASNKRKIQEQGRLDDQTKSRKSAKKAGSKRGKKAAQCEGEDGSIAVTNRQSLSCCT 200

Query: 350 STAAVPSTQENRVLLDPTEQGRNSHRMSVIPEAI 383
           S      +QE+ V      + ++ HR +  P+++
Sbjct: 201 SENDSIGSQESPVAAKSNGKAQSGHRSATDPQSL 234


>06_03_1344 -
           29472139-29473292,29474478-29475386,29475504-29475618,
           29476017-29476218,29477177-29477296,29477431-29477582,
           29478177-29478461
          Length = 978

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 274 ESEQDLDTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGE 333
           E E D DT+      +R+E R+  E+    +S E+        ++S S   KHS G+K E
Sbjct: 449 EVEVDRDTRRHPKREHRKEKRNMTENGHSSRSREKHH----YSDTSTSDNEKHSMGHKDE 504


>03_06_0617 -
           35124114-35124148,35124243-35124335,35124415-35124919,
           35125039-35125238,35125514-35125604,35125699-35126769
          Length = 664

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 7/80 (8%)

Query: 271 PPDESEQDLDTKYF--GAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKH-- 326
           P DE + D   +Y   G    RR+SR+   +    +  +R   +S ++ S   K  K+  
Sbjct: 530 PSDEQDNDSGDEYTARGKQKGRRKSREKNINKEPSRGTKRTSGDSTIEESQKQKLQKNKS 589

Query: 327 ---SEGNKGESVQISVDGPE 343
              S G K  S   SV+ PE
Sbjct: 590 KASSGGQKKTSKDSSVEQPE 609


>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
          Length = 440

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 33  RLVMANAHWLIEDSENYEGLENVKRRVQQAMRGKPKKKQLLSINHVKKKLAAVTYFKYYG 92
           RL ++NA   I      + ++  K++ ++  + K KKK+       KKKL  V  F +Y 
Sbjct: 351 RLYLSNAQLRIFRLNPSKTIKRKKKKKKKKKKKKKKKKKKKKKKKKKKKLRFVMIF-FYQ 409

Query: 93  PCRTIVRQH 101
            C T+ + +
Sbjct: 410 LCETVEKMY 418


>02_04_0003 +
           18832467-18832543,18832627-18832849,18832985-18833375,
           18833766-18834223,18834320-18834607,18834679-18835398
          Length = 718

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 15/65 (23%), Positives = 28/65 (43%)

Query: 255 TTRLGRDFYSLYDPYIPPDESEQDLDTKYFGAYNNRRESRDSVESTSQRKSIERKRTESI 314
           TT+       +   Y+ P  S      +Y   YN+R E+ D+ E  +  + +    +  I
Sbjct: 335 TTQRSESMNHVLKKYVKPSSSLNGFAKRYENFYNDRIEAEDAEEHDTYNEKVSTLTSSPI 394

Query: 315 LKNSS 319
            K++S
Sbjct: 395 KKHAS 399


>06_03_0832 +
           25190755-25190960,25191869-25191997,25192079-25192301,
           25192447-25192702,25193228-25193685,25193783-25194070,
           25194143-25194874
          Length = 763

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 15/65 (23%), Positives = 28/65 (43%)

Query: 255 TTRLGRDFYSLYDPYIPPDESEQDLDTKYFGAYNNRRESRDSVESTSQRKSIERKRTESI 314
           TT+       +   Y+ P  S      +Y   YN+R E+ D+ E  +  + +    +  I
Sbjct: 376 TTQRSESMNHVLKKYVKPSSSLHGFAKRYENFYNDRIEAEDAEEHDTYNEKVSTLTSSPI 435

Query: 315 LKNSS 319
            K++S
Sbjct: 436 EKHAS 440


>06_02_0325 +
           14428065-14428799,14428916-14428993,14429607-14429844,
           14431199-14431296,14431770-14432063,14432418-14432702
          Length = 575

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 316 KNSSLSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHR 375
           +   + K+ K       ++  +S+  P  ++ S+ + + PST+EN     P     ++  
Sbjct: 5   RGRKMGKKGKSKASTTADASPMSLSSPSTVDASSKSPSSPSTEENGT--SPAHHQADNAP 62

Query: 376 MSVIPEAIVEPLP 388
           + + P  + EP P
Sbjct: 63  V-IAPPPVPEPAP 74


>05_05_0179 +
           23022985-23023190,23024099-23024227,23024309-23024531,
           23024674-23024929,23025455-23025912,23026009-23026296,
           23026369-23027100
          Length = 763

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 15/65 (23%), Positives = 28/65 (43%)

Query: 255 TTRLGRDFYSLYDPYIPPDESEQDLDTKYFGAYNNRRESRDSVESTSQRKSIERKRTESI 314
           TT+       +   Y+ P  S      +Y   YN+R E+ D+ E  +  + +    +  I
Sbjct: 376 TTQRSESMNHVLKKYVKPSSSLHGFAKRYENFYNDRIEAEDAEEHDTYNEKVSTLTSSPI 435

Query: 315 LKNSS 319
            K++S
Sbjct: 436 EKHAS 440


>03_02_0226 -
           6569657-6570388,6570461-6570748,6570846-6571303,
           6571694-6571828,6571829-6572084,6572229-6572451,
           6572533-6572661,6573570-6573775
          Length = 808

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 15/65 (23%), Positives = 28/65 (43%)

Query: 255 TTRLGRDFYSLYDPYIPPDESEQDLDTKYFGAYNNRRESRDSVESTSQRKSIERKRTESI 314
           TT+       +   Y+ P  S      +Y   YN+R E+ D+ E  +  + +    +  I
Sbjct: 421 TTQRSESMNHVLKKYVKPSSSLHGFAKRYENFYNDRIEAEDAEEHDTYNEKVSTLTSSPI 480

Query: 315 LKNSS 319
            K++S
Sbjct: 481 EKHAS 485


>01_01_0908 +
           7158172-7158356,7159436-7159866,7159953-7161061,
           7161372-7162820
          Length = 1057

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 40/190 (21%), Positives = 73/190 (38%), Gaps = 11/190 (5%)

Query: 209 EGCIVAKMKSYEQNETLLGDGVGVANFVYFVLSGRCQMIESIQVVVTTRLGRDFYSLYDP 268
           +G   +K K+  +   ++ DG  + N+    L+G+ +   S+   V    G    +L + 
Sbjct: 427 DGLKSSKNKTKRKYSDVVDDGSSLMNW----LNGKKKRTGSVHHTVAHPAG----NLSNK 478

Query: 269 YIPPDESEQDLDTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSE 328
            + P  S Q  D       N    +    +       I  +R  S  K + LSK   HS 
Sbjct: 479 KVTPTASTQHDDEN--DTENGLDTNMHKTDVCQHVSEISTQRCSSKGKTAGLSKGKTHSA 536

Query: 329 GNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVIPEAIVEPLP 388
            +     + + +G  I  LSA       T EN VL    +     H + ++ +   + LP
Sbjct: 537 ASTKYGGESTRNGQNIHVLSAEDQCQMET-ENSVLSHSAKVSPAEHDIQIMSDLHEQSLP 595

Query: 389 QNLRTYFMQV 398
           +  +   ++V
Sbjct: 596 KKKKKQKLEV 605


>12_01_0533 -
           4202835-4203031,4203826-4203995,4204952-4205001,
           4205085-4205459
          Length = 263

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 9/93 (9%)

Query: 305 SIERKRTESILKNSSLSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLL 364
           S+E K   ++++ +  +++ K+S    G  V+ S+    ++        +     N+ LL
Sbjct: 172 SVEEKA--ALVQRNRENRERKNSASTSGTEVRNSLFKEPVLH---DAIKIGVNFRNQELL 226

Query: 365 DPTEQGRNSHRMSVI----PEAIVEPLPQNLRT 393
            P EQ        V+     E ++EPLP+  RT
Sbjct: 227 QPAEQNNAPGEPEVVIVEDDEVVIEPLPKKKRT 259


>11_01_0591 - 4694710-4695270
          Length = 186

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 21/59 (35%), Positives = 25/59 (42%)

Query: 104 AHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQSGDLFGEVSLLHGIPRTATVTTVG 162
           A  L  +V  +V V  M   E      SI     ++GD    V LL GIP     TTVG
Sbjct: 3   AVGLLVLVGLQVVVGSMAAQEAGDAPASITGPCSRTGDKKACVELLSGIPEARKATTVG 61


>11_01_0587 - 4662277-4662837
          Length = 186

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 21/59 (35%), Positives = 25/59 (42%)

Query: 104 AHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQSGDLFGEVSLLHGIPRTATVTTVG 162
           A  L  +V  +V V  M   E      SI     ++GD    V LL GIP     TTVG
Sbjct: 3   AVGLLVLVGLQVVVGSMAAQEAGDAPASITGPCSRTGDKKACVELLSGIPEARKATTVG 61


>10_08_1023 - 22341815-22342042,22342179-22342247,22342717-22342840,
            22343193-22343317,22343815-22344276,22344357-22344700,
            22345061-22345406,22345492-22345941,22346760-22347051,
            22347171-22347515,22347611-22347834,22348072-22348563,
            22348664-22349056,22349601-22349741,22349845-22350207,
            22350494-22352683,22353298-22353360,22353434-22353535,
            22353672-22354027,22354326-22354413,22354517-22354750,
            22355508-22355975
          Length = 2632

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 11/39 (28%), Positives = 26/39 (66%)

Query: 290  RRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSE 328
            R+E R+++++      +E++RT+ I+  SS+++ +  SE
Sbjct: 978  RQELREALQAEVHSLDVEKERTDDIVPGSSVTEDASDSE 1016


>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
            21260180-21260461,21261084-21261587,21261973-21261981,
            21262122-21262196,21262375-21262449,21262557-21263494,
            21263577-21263607,21263694-21263979,21264691-21264905,
            21265329-21265437,21265556-21265611,21265730-21265822,
            21266348-21266393,21266496-21267221,21267489-21267550,
            21267738-21268013,21268604-21268735,21268835-21268909
          Length = 1394

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 5/58 (8%)

Query: 288  NNRRESRDSVESTSQRKSI----ERKRTESILKNSSLSKQSKHSEGNKGESVQISVDG 341
            +  ++SRD  ++ S++KS+    E+K+++   K+     Q+K S+ +K  S  +S+DG
Sbjct: 969  DKEKKSRDQ-KTDSKQKSLTDTKEKKKSDEPPKHPGFILQAKRSKDSKVRSTSLSLDG 1025


  Database: rice
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.319    0.134    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,303,360
Number of Sequences: 37544
Number of extensions: 577372
Number of successful extensions: 1582
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1553
Number of HSP's gapped (non-prelim): 30
length of query: 508
length of database: 14,793,348
effective HSP length: 85
effective length of query: 423
effective length of database: 11,602,108
effective search space: 4907691684
effective search space used: 4907691684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)

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