Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001177-TA|BGIBMGA001177-PA|IPR000595|Cyclic
nucleotide-binding
(508 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11281| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 5e-11
SB_11282| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 6e-11
SB_11280| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 8e-10
SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 7e-09
SB_19865| Best HMM Match : cNMP_binding (HMM E-Value=8.3e-39) 50 6e-06
SB_18186| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 3e-04
SB_56249| Best HMM Match : cNMP_binding (HMM E-Value=5.4e-23) 43 5e-04
SB_16296| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.004
SB_29572| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.006
SB_28522| Best HMM Match : cNMP_binding (HMM E-Value=1.1e-17) 36 0.058
SB_52453| Best HMM Match : cNMP_binding (HMM E-Value=1.9e-26) 36 0.058
SB_43598| Best HMM Match : cNMP_binding (HMM E-Value=4.3e-22) 36 0.077
SB_37811| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.077
SB_12691| Best HMM Match : cNMP_binding (HMM E-Value=1.7e-26) 36 0.10
SB_59743| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.13
SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 34 0.24
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.31
SB_28115| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.31
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.41
SB_13968| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.54
SB_24078| Best HMM Match : cNMP_binding (HMM E-Value=1.4e-26) 32 0.95
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 32 1.3
SB_33530| Best HMM Match : DUF1168 (HMM E-Value=0.19) 32 1.3
SB_50721| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.2
SB_52318| Best HMM Match : Pox_A32 (HMM E-Value=0.066) 31 2.9
SB_43863| Best HMM Match : FLO_LFY (HMM E-Value=1.5) 31 2.9
SB_27554| Best HMM Match : cNMP_binding (HMM E-Value=2.6) 31 2.9
SB_22849| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 2.9
SB_15269| Best HMM Match : DUF1289 (HMM E-Value=3.5) 31 2.9
SB_11815| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.002) 31 2.9
SB_51285| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.9
SB_39432| Best HMM Match : DTHCT (HMM E-Value=3.9) 31 2.9
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 30 3.8
SB_44265| Best HMM Match : DUF1032 (HMM E-Value=4e-06) 30 3.8
SB_1740| Best HMM Match : Protamine_P2 (HMM E-Value=0.9) 30 3.8
SB_380| Best HMM Match : AAA (HMM E-Value=0.14) 30 3.8
SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0) 30 5.1
SB_43688| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.1
SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7) 30 5.1
SB_33496| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.1
SB_24373| Best HMM Match : Skb1 (HMM E-Value=1.6e-05) 30 5.1
SB_6352| Best HMM Match : GTP_CDC (HMM E-Value=1.49939e-42) 30 5.1
SB_3340| Best HMM Match : Exonuc_X-T (HMM E-Value=0.0051) 29 6.7
SB_51620| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19) 29 6.7
SB_22850| Best HMM Match : CXC (HMM E-Value=0.22) 29 8.8
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 8.8
>SB_11281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 66.5 bits (155), Expect = 5e-11
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 79 KKKLAAVTYFKYYGPCRTIVRQ-HQDAHALYFIVSGEVTV----------------TQMV 121
++ LA V Y++ + R +V+Q H+ +LYFI+SG V V T V
Sbjct: 137 RRGLAKVVYYEQFEDGRVVVQQGHKGISSLYFILSGAVLVQVAEEDKTTGKITEHVTHYV 196
Query: 122 FDELLQQYV------SIEIGVMQSGDLFGEVSLLHGIPRTATVTTVGHCELLALMKEDFK 175
L++ +V S +G M +GD FGE++LLH I RTAT+ G E L L K F
Sbjct: 197 RSSLVRCFVKKNKPSSFIVGEMFAGDSFGELALLHDIKRTATIICKGRAEFLRLDKPGFD 256
Query: 176 NVLQASVQKQWDEVKRAMSAFTYFDGLDEVARREGCIVAKMKSYEQN 222
VL+ S ++ W+ + + F+ E + + + Y N
Sbjct: 257 EVLKNSYKRAWEARISHLRSLPEFEDYHEKELHKATATSTLAEYPDN 303
>SB_11282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 66.1 bits (154), Expect = 6e-11
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 77 HVKKKLAAVTYFKYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDE---------LLQ 127
+VK++LA V Y+ Y R I++Q + YFIVSG V V ++ D ++
Sbjct: 170 YVKRELAKVLYYDVYEQDRVIIKQGHIGVSFYFIVSGSVVVQRVEEDRTTGEKHNQSMII 229
Query: 128 QYVSIEIGVMQSGDLFGEVSLLHGIPRTATVTTVGHCELLALMKEDFKNV 177
Y S I M GD FGE++L+H I RTAT+ E L + K+DF +
Sbjct: 230 AYFSKIISEMTGGDSFGELALMHDIRRTATIICKERSEFLRVDKDDFNEM 279
>SB_11280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 62.5 bits (145), Expect = 8e-10
Identities = 30/110 (27%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 395 FMQVCIFNPGSSFGFGENMRDRRIVALTPVDCMLLPKIWLLQRNTANIWTRIQHYLDKKI 454
F+ + + G FG GE++ I++ V+ +L+P+ LL+ + ++ L +
Sbjct: 478 FLVLRMLKKGDFFGVGEDLSKSSIISAGRVEIVLVPRSVLLKHDRGLGCVKMCQQLSDRF 537
Query: 455 PTKKDLFKQFVEDRRWQEFRDQMVDDVVS-RSNTVNWTSVHDVPYSIRME 503
PT+ ++F+ F+E RW+ ++ Q++ ++ R N T+ DVP +IR+E
Sbjct: 538 PTRCEVFRSFIESDRWKRYKQQVIREMFGLRRKVANNTTFADVPRAIRVE 587
>SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 59.3 bits (137), Expect = 7e-09
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Query: 358 QENRVLLDPTEQGRNSHRMSVIPEAIVEPLPQNLRTYFMQVCIFNPGSSFGFGENMRDRR 417
+E + P G+ H + I P + T + V I NPG FG GE++
Sbjct: 80 REVEIYRQPLASGKFRHTLPPIGRRRDTINPSRIETKLLTVRILNPGEYFGVGEDLTKTY 139
Query: 418 IVALTPVDCMLLPKIWLLQR-NTANIWTRIQHYLDKKIPTKKDLFKQFVEDRRWQEFRDQ 476
I+A V C+L+ + +R ++ L++ P+ + F ++ED W+ ++
Sbjct: 140 IIATGRVHCILVHHMMFNKRGERGRFLGNMREQLEQTFPSPEQAFTSYLEDTTWKLYKKH 199
Query: 477 MVDDVVSR 484
+DDV+ R
Sbjct: 200 CIDDVLRR 207
>SB_19865| Best HMM Match : cNMP_binding (HMM E-Value=8.3e-39)
Length = 373
Score = 49.6 bits (113), Expect = 6e-06
Identities = 30/99 (30%), Positives = 57/99 (57%), Gaps = 9/99 (9%)
Query: 81 KLAAVTYFKYYGPCRTIVRQ-HQDAHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQS 139
K++ Y K + ++R+ ++ A+ +YFI G+V VT V D +++ V +
Sbjct: 258 KVSDALYPKEFKDGEAVIREGNESAYCMYFIEKGKVRVT--VKDGEVEKTVEFD------ 309
Query: 140 GDLFGEVSLLHGIPRTATVTTVGHCELLALMKEDFKNVL 178
+ FGE++L+ PR+A+V VG C+ +L K+DF+ ++
Sbjct: 310 KNYFGELALVMNQPRSASVYAVGECKFASLKKDDFERLM 348
Score = 41.5 bits (93), Expect = 0.002
Identities = 37/178 (20%), Positives = 76/178 (42%), Gaps = 9/178 (5%)
Query: 89 KYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQSGDLFGEVSL 148
K P I++ + Y I +GE V F SI++ +FGE++L
Sbjct: 142 KKVSPEEIIIKVGDEGDNFYVINTGEYDV----FALDTNTGASIKVHTFNGTGMFGELAL 197
Query: 149 LHGIPRTATVTTVGHCELLALMKEDFKNVLQASVQKQWDEVKRAMSAFTYFDGL--DEVA 206
+H R AT+ L AL + F V+ Q++ + + + + L DE+
Sbjct: 198 MHNSLRNATIVAKTEGTLWALDRSTFVQVVVGGAQRRRERNIELLKSVSILKELKPDELD 257
Query: 207 RREGCIVAKMKSYEQNETLLGDGVGVANFVYFVLSGRCQM-IESIQVVVTTRLGRDFY 263
+ + K ++ E ++ +G A +YF+ G+ ++ ++ +V T ++++
Sbjct: 258 KVSDALYP--KEFKDGEAVIREGNESAYCMYFIEKGKVRVTVKDGEVEKTVEFDKNYF 313
>SB_18186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 44
Score = 44.0 bits (99), Expect = 3e-04
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 134 IGVMQSGDLFGEVSLLHGIPRTATVTTVGHCELLALMKEDF 174
+G M +GD FGE++LLH I RTAT+ G E L L K F
Sbjct: 2 VGEMFAGDSFGELALLHDIKRTATIICKGRAEFLRLDKPGF 42
>SB_56249| Best HMM Match : cNMP_binding (HMM E-Value=5.4e-23)
Length = 279
Score = 43.2 bits (97), Expect = 5e-04
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 134 IGVMQSGDLFGEVSLLHGIPRTATVTTVGHCELLALMKEDFKNVLQ 179
IG + G FGE+ L++G R ATV +C++L L K D VL+
Sbjct: 180 IGTLGPGSFFGEIGLIYGESRFATVQAKTYCQILMLTKHDLDEVLE 225
>SB_16296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 40.3 bits (90), Expect = 0.004
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 20/134 (14%)
Query: 97 IVRQHQDAHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQSGDLFGEVSLLH----GI 152
I RQ + +Y + G + E+L + ++ + + +G FGE+SLL+ G
Sbjct: 551 ICRQGEKGREMYIVNKGSL--------EVLDEKETV-LATLSAGSHFGEISLLNMKGIGN 601
Query: 153 PRTATVTTVGHCELLALMKEDFKNVLQASVQKQWDEVKRAMSAFTYFDGLDEVARREGCI 212
RTA+V +VG +L L K D + VL+ Q + ++++R ++ TY E +RE
Sbjct: 602 LRTASVRSVGFSDLFQLSKTDLEEVLEFYPQAK-EQMER-IATQTY-----EKQQRERMG 654
Query: 213 VAKMKSYEQNETLL 226
+K K + +ET L
Sbjct: 655 QSKSKEDDADETFL 668
>SB_29572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 39.5 bits (88), Expect = 0.006
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 124 ELLQQYVSIEIGVMQSGDLFGEVSLLH----GIPRTATVTTVGHCELLALMKEDFKNVL 178
E++ ++ + V+++G FGE+S+L G RTA+V +VG+ EL L K D VL
Sbjct: 426 EVVSEHGTKIYAVLEAGSYFGEISVLSMSSAGNRRTASVRSVGYTELFCLAKNDLMEVL 484
>SB_28522| Best HMM Match : cNMP_binding (HMM E-Value=1.1e-17)
Length = 380
Score = 36.3 bits (80), Expect = 0.058
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 134 IGVMQSGDLFGEVSLLHGIPRTATVTTVGHCELLALMKEDFKNVL 178
+G + G FGE+ L+ G R TV +C+ L L K D VL
Sbjct: 139 VGTLGPGSFFGEIGLVCGESRVYTVQCKTYCQTLMLTKHDMDKVL 183
>SB_52453| Best HMM Match : cNMP_binding (HMM E-Value=1.9e-26)
Length = 370
Score = 36.3 bits (80), Expect = 0.058
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
Query: 97 IVRQHQDAHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQSGDLFGEVSLLHGIPRTA 156
+V Q + + IV G T +V IE+ + D FGE++L+ PR A
Sbjct: 271 VVVQGEHGDEFFIIVEG----TAVVLQRRSANEDFIEVSRLGPSDYFGEIALVLNRPRAA 326
Query: 157 TVTTVGHCELLALMKEDFKNVLQASVQKQWDEVKRAMSAFTYFDGL 202
TV G + + L ++ F+ VL + D +KR + + F L
Sbjct: 327 TVQARGTLKCVKLDRQRFERVLGPCI----DILKRNIQQYNSFVSL 368
Score = 35.9 bits (79), Expect = 0.077
Identities = 17/74 (22%), Positives = 38/74 (51%)
Query: 134 IGVMQSGDLFGEVSLLHGIPRTATVTTVGHCELLALMKEDFKNVLQASVQKQWDEVKRAM 193
+ + G FGE++L++G PR AT+ +L A+ + ++ +L S ++ ++ +
Sbjct: 180 VSTIGEGGSFGELALIYGTPRAATIKAKTDVKLWAIDRVTYRRILMGSQIRKRRMYEQFL 239
Query: 194 SAFTYFDGLDEVAR 207
+ + LD+ R
Sbjct: 240 EKVSILESLDKWER 253
>SB_43598| Best HMM Match : cNMP_binding (HMM E-Value=4.3e-22)
Length = 581
Score = 35.9 bits (79), Expect = 0.077
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 134 IGVMQSGDLFGEVSLLH----GIPRTATVTTVGHCELLALMKED 173
+ ++ G FGE+S+L+ G RTA V +VG +LL L K+D
Sbjct: 510 LAILSEGSYFGEISILNLSGIGNRRTAAVRSVGFSDLLCLSKDD 553
>SB_37811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 738
Score = 35.9 bits (79), Expect = 0.077
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 98 VRQHQDAH---ALYFIVSGEVTVTQMVFDELLQQ--YVSIEIGV-MQSGDLFGEVSLLHG 151
V++ Q H A YFI SG V + +ELL++ +V V + GD FGE++LL
Sbjct: 431 VQRTQGGHEGIAFYFIFSGSVFIN---VEELLKKSDHVMWHTSVILHRGDSFGELTLLRK 487
Query: 152 IPRTATVTTVGHCELLALMKEDF 174
TA+V E+L + K+ F
Sbjct: 488 TKHTASVAVREDVEMLVVNKDVF 510
>SB_12691| Best HMM Match : cNMP_binding (HMM E-Value=1.7e-26)
Length = 376
Score = 35.5 bits (78), Expect = 0.10
Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 134 IGVMQSGDLFGEVSLLHGIPRTATVTTVGHCELLALMKEDFKNVLQASVQKQWDEVKRAM 193
+G M G FGE+++L+ RTA+V +L A+ ++ F+ ++ + + E +
Sbjct: 207 LGHMGPGKAFGELAILYNCTRTASVRAQTSGKLWAIDRQTFQTIMMKTGLMRTAEHMEFL 266
Query: 194 SAFTYFDGLDEVARREGCIVAKMKSYEQNETLLGDGV-GVANFVYFVLSGRCQMIE 248
+ L E + V + YE+ E ++ G G F+ +G C +++
Sbjct: 267 RSVNLLKDLAESYLLKIADVIEETFYEEGEYIIRQGARGDTFFIIKSGNGLCLVVD 322
>SB_59743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1220
Score = 35.1 bits (77), Expect = 0.13
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 431 KIWLLQRNTANIWTR-IQHYLDKKIP--TKKDLFKQFVEDRRWQEFRDQMV 478
K W L N +N++TR +Q+ LD+ IP K L K V + W E D ++
Sbjct: 519 KAWNLHENVSNVYTRLVQNILDEDIPDDVKHKLLKPLVPAKVWTEEVDPLL 569
>SB_29436| Best HMM Match : PAN (HMM E-Value=0.021)
Length = 419
Score = 34.3 bits (75), Expect = 0.24
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
Query: 289 NRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNKGESVQISVDGPEIIELS 348
N R++RD V +T R + T + N+ QS + Q + PE +
Sbjct: 204 NNRDTRDPVNNTDTRDPVNNTDTRDPVNNTDTETQSTTTT----PETQSTTTTPE----T 255
Query: 349 ASTAAVPSTQENRVLLDPTEQGRNSHRMSVIP 380
ST +P TQ P++Q R+ V+P
Sbjct: 256 QSTTEIPETQSTTTTPRPSQQQRHPRPRYVLP 287
>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3293
Score = 33.9 bits (74), Expect = 0.31
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 11/127 (8%)
Query: 262 FYSLYDPYIPPDESEQDLDTKYFG---------AYNNRRESRDSVESTS--QRKSIERKR 310
F +L D PP DL+T + +RRE R+ T Q ++E+K+
Sbjct: 1090 FTALEDSLPPPPPVSDDLETSHDNLPLPTPPREVMEDRREGRECSPRTQIVQAITVEQKK 1149
Query: 311 TESILKNSSLSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQG 370
TES LK+ S S + ++ + + G S A + S++ L E+
Sbjct: 1150 TESPLKDDSFSSKKYSPARDQRRPPKGATLGERPSNRSNDAADMTSSRPMHRLTPEQEKK 1209
Query: 371 RNSHRMS 377
R++++MS
Sbjct: 1210 RSAYKMS 1216
>SB_28115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 33.9 bits (74), Expect = 0.31
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 80 KKLAAVTYFKYYGPCRTIVRQHQDAHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQS 139
+K+ Y + I+++ +ALY I G + VT+ + V +G M +
Sbjct: 496 RKIVDCMYSNTFQRNDVIIQEGDAGNALYAIADGRLQVTR-------ENKV---LGEMVA 545
Query: 140 GDLFGEVSLLHGIPRTATVT 159
G +FGE+++L+ RTATVT
Sbjct: 546 GMVFGELAILYNCRRTATVT 565
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 33.5 bits (73), Expect = 0.41
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Query: 213 VAKMKSYEQN-ETLLGDGVGVANFVYFVLSGRCQMIESIQVVVTTRLGRDFYSLYDPYIP 271
+ K K+Y +N + +G+ + ++ V S E ++ + + + +D P P
Sbjct: 573 IDKNKTYRRNNQGFVGEAISDVGELFIVSSSLLSPFE-LRTIFSIKGSKDA----KPDEP 627
Query: 272 PDESEQDLDTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNK 331
DE D++ K + E + + ++K E+K ES + +SK SEG K
Sbjct: 628 KDEKSDDVNEKPKDEEAEKEEDKKEEKKEEEKKPDEKKEDESKSEGKKEGDESK-SEGKK 686
Query: 332 GE 333
E
Sbjct: 687 EE 688
>SB_13968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 33.1 bits (72), Expect = 0.54
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Query: 310 RTESILKNSSLSK-QSKHSEGNKGESVQISVDGPEIIELS-------ASTAAVPSTQENR 361
RT+S +K SS K ++ H+ G K ++Q+S++ + EL+ ST A+ ++ ++
Sbjct: 401 RTQSEIKRSSAIKGKAPHTLGLK--NIQLSINRQQSTELTLPSINDIVSTIALNASSDDM 458
Query: 362 VLLDPTEQGRNSHR 375
+ +DP E + +HR
Sbjct: 459 LFIDPMETDKKTHR 472
>SB_24078| Best HMM Match : cNMP_binding (HMM E-Value=1.4e-26)
Length = 692
Score = 32.3 bits (70), Expect = 0.95
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 134 IGVMQSGDLFGEVSLLHGIPRTATVTTVGHCELLALMKEDFKNVL 178
I G+ FGEVS+L+ IP A V L+ L D + +L
Sbjct: 288 IRAFTEGECFGEVSVLYDIPCIANVRVPSQASLILLRAADVQGIL 332
Score = 29.1 bits (62), Expect = 8.8
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 93 PCRTIV-RQHQDAHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQSGD----LFGEVS 147
PC + V R+ H +Y +V G V + F E ++ V SGD FGE
Sbjct: 400 PCGSAVYREGDPGHEMYVLVHGRVGL----FAE------GHQLAVFDSGDKRGFTFGEEG 449
Query: 148 LLHGIPRTATVTTVGHCELLALMKEDFKNVL-QASVQKQWDE 188
+ T+ + C+++ L K F ++L Q +K ++E
Sbjct: 450 FFTDKEKRCTIKALTPCQIITLKKHHFYDILNQYPNEKVYNE 491
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 31.9 bits (69), Expect = 1.3
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 272 PDESEQDLDTKYFGAYNNRRESRDSVESTSQRKSIERKRTESILKNSSLSKQS------- 324
PDESE++ +T ++ +E+ D+ E T K+ ERK++ES + + S
Sbjct: 547 PDESEKETETDDTKETDDTKETEDTKE-TEDIKANERKKSESSSVGNEEEESSEDDDDED 605
Query: 325 ---KHSEGNKGESVQISVDGPEII 345
+ +GN+ S + S D PE +
Sbjct: 606 DDEEDDDGNESSSEESSDDEPETV 629
>SB_33530| Best HMM Match : DUF1168 (HMM E-Value=0.19)
Length = 1026
Score = 31.9 bits (69), Expect = 1.3
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 307 ERKRTESILKNSSLSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQE 359
E+ R +++ + + SK S+H G S+ II+ +S+A P T E
Sbjct: 762 EKDRIKAVSSSVTASKTSEHFATKPGSSIDAPTGNKHIIKAVSSSATAPKTSE 814
>SB_50721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1057
Score = 31.1 bits (67), Expect = 2.2
Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 20/228 (8%)
Query: 153 PRTATVTTVGHCELLALMKEDFKNVLQASVQKQWDEVKRAMSAFTYFDGLDEVARREGCI 212
PR ++ H E+ +KE + L ++Q ++ K+A + F+ +++
Sbjct: 257 PRKRSLNKGNHTEVSRQLKETEDSDLTRAIQTSLEDTKKATNTCPKFNE-EDILEHSPRF 315
Query: 213 VAKMKSYEQNETLLGDGVGVANFVYFVLSGRCQMIESIQVV-VTTRLGRDFYSLYDPYIP 271
+ K +N T L + A FV + + +++SI+ + ++L + S Y P I
Sbjct: 316 YLRTK---ENRTDLIEKEDSA----FVSAIQACLMDSIKTSNICSKLDDECMSKYSPRIR 368
Query: 272 PDESEQDL-DTKYFGAYNNRRE----SRDSVESTSQRKSIERKRTESILKNSSLSKQSKH 326
+++ DL D K RE + S+ T++ S K + L S K++ H
Sbjct: 369 SVKAKTDLKDVKGEAEITEERELARAIKASLNDTTKPFSTCSKVDDDDLIEYSAHKRNLH 428
Query: 327 SEGNKGESVQISV-DGPEIIELSASTAAVPSTQENRVLLDPTEQGRNS 373
SE + + + V DG + AS P T + PT GR++
Sbjct: 429 SEVDLSDLNGVKVTDGELARAIQASLNDTPKTN-----IWPTSVGRDN 471
>SB_52318| Best HMM Match : Pox_A32 (HMM E-Value=0.066)
Length = 716
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 447 QHYLDKKIPT--KKDLFKQFVEDRRWQEFRDQMVDDVVSRSNTVNWTSVHDVPYSIRME 503
Q Y D IP ++DL KQ + ++ R D V S + V +VH+ Y I ++
Sbjct: 108 QTYHDLFIPKEEREDLLKQGISSENMRKLRTNAGDKVTSDAKEVALAAVHNTKYKIPLD 166
>SB_43863| Best HMM Match : FLO_LFY (HMM E-Value=1.5)
Length = 592
Score = 30.7 bits (66), Expect = 2.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 290 RRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNK 331
++E RD +++S+RK + E+ K S+SK+ S+G K
Sbjct: 411 KKEERDLDKNSSERKEKHERDKEAKTKERSISKERDKSKGEK 452
>SB_27554| Best HMM Match : cNMP_binding (HMM E-Value=2.6)
Length = 82
Score = 30.7 bits (66), Expect = 2.9
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 132 IEIGVMQSGDLFGEVSLLHGIPRTATVTTVGHCELLALMKEDFKNVL 178
+EI G FGE++L+ R A+V +VG C +L F+ +L
Sbjct: 7 VEIAQCTKGGYFGELALITHNTRAASVYSVGDCVCASLDVHAFERLL 53
>SB_22849| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1359
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 447 QHYLDKKIPT--KKDLFKQFVEDRRWQEFRDQMVDDVVSRSNTVNWTSVHDVPYSIRME 503
Q Y D IP ++DL KQ + ++ R D V S + V +VH+ Y I ++
Sbjct: 1113 QTYHDLFIPKEEREDLLKQGISSENMRKLRTNAGDKVTSDAKEVALAAVHNTKYKIPLD 1171
>SB_15269| Best HMM Match : DUF1289 (HMM E-Value=3.5)
Length = 195
Score = 30.7 bits (66), Expect = 2.9
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 256 TRLGRDFYSLYDPYIPPDESEQDLDTKYFGAYNNRRESRDSVESTSQRKSIERKRTESIL 315
T L D++ P I SE L+T Y ++RES S S S R+ +
Sbjct: 83 TSLDLDYFRT-KPEIRRQRSEGSLETYYRKLRGDKRESMKRNGSISSSTSRARRLSRDSS 141
Query: 316 KNSSLSKQSKHSEGNKGESVQISVDGPEIIELSAS 350
S + Q + G+ G+S ++S GP +++LS +
Sbjct: 142 SGSIETGQRRDRTGS-GQSWRLS-KGPGLVKLSGA 174
>SB_11815| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.002)
Length = 1725
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 447 QHYLDKKIPT--KKDLFKQFVEDRRWQEFRDQMVDDVVSRSNTVNWTSVHDVPYSIRME 503
Q Y D IP ++DL KQ + ++ R D V S + V +VH+ Y I ++
Sbjct: 1184 QTYHDLFIPKEEREDLLKQGISSENMRKLRTNAGDKVTSDAKEVALAAVHNTKYKIPLD 1242
>SB_51285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 30.7 bits (66), Expect = 2.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 290 RRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNK 331
++E RD +++S+RK + E+ K S+SK+ S+G K
Sbjct: 19 KKEERDLDKNSSERKEKHERDKEAKTKERSISKERDKSKGEK 60
>SB_39432| Best HMM Match : DTHCT (HMM E-Value=3.9)
Length = 198
Score = 30.7 bits (66), Expect = 2.9
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 309 KRTESILKNSSLSKQSKHSEGNK-GESVQISVDGPEIIELSASTAAVPSTQENRVLLDPT 367
K+ + L+NS + Q++H+E + + +I D + + + AV T++ R+L D +
Sbjct: 118 KKPQESLENSDSTTQNRHTEVREVKKRDRIQSDPSSPLTANQTRTAVDHTKKQRILSDSS 177
Query: 368 EQGRNSHRMSVIPEAIVE 385
G S R+ EA VE
Sbjct: 178 VSGSISSRLK--SEAEVE 193
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 291 RESRDSVESTSQRKSIERKRTESILKNSSLSKQSKHSEGNK 331
RESR + E+ +R +++KR E + + ++ K E NK
Sbjct: 1168 RESRRAAEAERRRLEVQKKREEKKKREEEMREKEKEMEQNK 1208
>SB_44265| Best HMM Match : DUF1032 (HMM E-Value=4e-06)
Length = 1073
Score = 30.3 bits (65), Expect = 3.8
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 38 NAHWLIE-DSENYEGLENVKRRVQQAMRGKPKKKQLLSINHVKKKLAAVTYFKYY 91
N H LI+ D + E K VQQ P K +LL I+ V+KK+ + +Y+
Sbjct: 764 NEHKLIDVDLSSEEAKRITKSYVQQLDAAYPSKFKLLEISSVEKKINKLNGSRYF 818
>SB_1740| Best HMM Match : Protamine_P2 (HMM E-Value=0.9)
Length = 268
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 257 RLGRDFYSLYDPYIPPDESEQDLDTKYFGAYNNR---RESRDSVESTSQRKSIERKRTES 313
+ G++ +YD +P DE+E D D +E +++ E QRK +E +
Sbjct: 86 KAGKEDKEVYDLDLPDDENEMDRDESDESEDEKMKAGKEEKENEELNPQRKMMEDSSVQD 145
Query: 314 ILKNSSLSKQSK 325
N++++ +S+
Sbjct: 146 PNNNNNINSRSR 157
>SB_380| Best HMM Match : AAA (HMM E-Value=0.14)
Length = 508
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 252 VVVTTRLG-RDFYSLYDPYIPPDESEQDLDTKYFGAYNNRRESRDSVESTSQRKSIERKR 310
V V+ R+ RD + +E E+D++T + E D E S+ + ER +
Sbjct: 431 VTVSARMAARDSDDSDEEAADEEEEEEDIETALDAEFEEEEEDMDEEEEESEEDATERLK 490
Query: 311 TE 312
TE
Sbjct: 491 TE 492
>SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0)
Length = 2376
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 95 RTIVRQHQDAHALYFIVSGEVTVTQMVFDELLQQYVSIEIGVMQSGDLFG 144
R ++R+ A YFI SG V VT DE E V+ GD FG
Sbjct: 571 RVVIRKGHVAQRFYFIYSGSVCVT-FDDDEYSAFVKPTENTVLHRGDFFG 619
>SB_43688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 29.9 bits (64), Expect = 5.1
Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 6/122 (4%)
Query: 273 DESEQDLDTKYFGAYNNRRESRDSVESTSQRKSIERKRT----ESILKNSSLSKQSKHSE 328
D + Q+ D + N D +E ++ K T +++LK S +QS
Sbjct: 469 DGTSQNSDASSDTSKNEDLNMEDGLEIENREPKENTKGTSNELDTLLKEGSPMQQSDFPR 528
Query: 329 GNKGESVQISVDGPEIIELSA--STAAVPSTQENRVLLDPTEQGRNSHRMSVIPEAIVEP 386
+ + IS + +E+ + V Q+N + LD TEQ +S E ++
Sbjct: 529 QKQDAPISISNELENCVEIDDLDTFVHVAEIQQNNLALDITEQEESSCEEVATCEKVIPE 588
Query: 387 LP 388
+P
Sbjct: 589 IP 590
>SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7)
Length = 810
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 292 ESRDSVESTSQRKSIERKRTESIL--KNSSLSKQSKHSEGNKGESVQISVDGPEIIE 346
+ + V+ + + +KR SI S++K+ K KG+SVQ S DG + ++
Sbjct: 624 QEKSVVDKSGKPAKASKKREHSISGGDTDSVTKKKKKKAAGKGDSVQTSEDGAKDVK 680
>SB_33496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1082
Score = 29.9 bits (64), Expect = 5.1
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 290 RRESRDSVESTSQRKSIERKRTESILKNSSLSKQSKH--SEGN----KGESVQISVDGPE 343
RRES D+ +S RK +++R E K SSL +S SE + + SV I D E
Sbjct: 460 RRESGDTDDSVKARKKEKKRREEQRDKESSLDFESSQELSEESFVHIEENSVDIDFDSAE 519
Query: 344 IIELSAS 350
+ S S
Sbjct: 520 DVSCSIS 526
>SB_24373| Best HMM Match : Skb1 (HMM E-Value=1.6e-05)
Length = 494
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 233 ANFVYFVLSGRCQMIESIQVVVTTRLGRDFYSLYDPYI-PPDESEQDLDTKYFGAYNN 289
AN V VL +E ++ LG+ Y +YDP+I PD S +DL + Y +
Sbjct: 105 ANAVVHVLEANPSAVEFLRKQFGDLLGKTVY-IYDPFIFHPDLSVKDLPEPFHALYRS 161
>SB_6352| Best HMM Match : GTP_CDC (HMM E-Value=1.49939e-42)
Length = 275
Score = 29.9 bits (64), Expect = 5.1
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 155 TATVTTVGHCELLALMKEDFKNVLQASVQK--QWDEVKRAMSAFTYFDGLDEVARREGCI 212
T TV E L ++F ++ ++Q QW ++K + + FD + E RR+
Sbjct: 51 TITVKAESKAEKGLLSYKNFIEIMMDTMQSMTQWGKLKTPLDGYVGFDTVQEQIRRK--- 107
Query: 213 VAKMKSYEQNETLLG-DGVGVANFVYFVLSGR 243
+ + +E N ++G G+G + V + G+
Sbjct: 108 -SLKRGFEFNLMVVGASGLGKSTMVNTLFKGK 138
>SB_3340| Best HMM Match : Exonuc_X-T (HMM E-Value=0.0051)
Length = 342
Score = 29.5 bits (63), Expect = 6.7
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 244 CQMIESIQVVVTTRLGRDFYSLYDPYIPPDESEQDLDTKYFG 285
C E +++ + + D LYD ++ PD D +TKY G
Sbjct: 258 CTTSEGLELTRVSVVEEDCTLLYDTFVKPDRPIIDYNTKYSG 299
>SB_51620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 29.5 bits (63), Expect = 6.7
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 146 VSLLHGIPRTATVTTVGHCELL-ALMKEDFKNVLQASVQKQWDEVKRAMSAFTYFDGLDE 204
+ + HG PRT T T G E KED + +LQ+ K+ + S +YF +D+
Sbjct: 51 IQISHGSPRTPT--TQGLVERSNRTFKEDLRAILQSEAHKELKRWCESTSQASYFQLVDQ 108
>SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19)
Length = 1883
Score = 29.5 bits (63), Expect = 6.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 310 RTESILKNSSLSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQE 359
R +++ + + SK S+H G S+ II+ +S+A P T E
Sbjct: 768 RIKAVSSSVTASKTSEHFATKPGSSIDAPTGNKHIIKAVSSSATAPKTSE 817
>SB_22850| Best HMM Match : CXC (HMM E-Value=0.22)
Length = 418
Score = 29.1 bits (62), Expect = 8.8
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 33 RLVMANAHWLIEDSENYEGLENVKRRVQQAMRGKPKKKQLLSINHVKKKLAAVTYFKYYG 92
+LV + + +D N + + V +V Q+M GK S + K LA+ Y K +
Sbjct: 86 KLVSLSTGLIADDEGNADDAKAVGDQVLQSMVGKTVSAYSFSKKNQVKTLASAAYLKTFS 145
Query: 93 PCRTIVRQHQDAHALYFIVSGEVTVTQMVFDEL 125
R + L + G++ +++++ EL
Sbjct: 146 GGRVELDPQHLYQRLLLMGIGDIPLSELLAYEL 178
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.1 bits (62), Expect = 8.8
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 320 LSKQSKHSEGNKGESVQISVDGPEIIELSASTAAVPSTQENRVLLDPTEQGRNSHRMSVI 379
LS+ SKHSE K G + L STA+ + + N + + T QG SH+ + I
Sbjct: 11 LSRPSKHSEPEK--------PGGHLANLERSTASSTTKKWNNLYIASTTQGAGSHQEAKI 62
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.134 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,264,389
Number of Sequences: 59808
Number of extensions: 658329
Number of successful extensions: 2290
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 2243
Number of HSP's gapped (non-prelim): 64
length of query: 508
length of database: 16,821,457
effective HSP length: 85
effective length of query: 423
effective length of database: 11,737,777
effective search space: 4965079671
effective search space used: 4965079671
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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