Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001176-TA|BGIBMGA001176-PA|undefined
(169 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces po... 29 0.48
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 0.84
SPBP35G2.05c |cki2||serine/threonine protein kinase Cki2|Schizos... 27 1.5
SPAC1783.07c |pap1|caf3, caf3|transcription factor Caf3|Schizosa... 27 1.9
SPAC4G8.11c |atp10||F1-F0 ATPase assembly protein|Schizosaccharo... 27 1.9
SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70 |Schi... 26 2.6
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 26 3.4
SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizos... 26 3.4
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 3.4
SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory... 25 7.8
SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyce... 25 7.8
>SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 875
Score = 28.7 bits (61), Expect = 0.48
Identities = 17/68 (25%), Positives = 30/68 (44%)
Query: 68 PDLAGKISQMGELTPESTKEQNSAGLNQLNSEQKSLINHYNESYKEKFGFPFIVCARENK 127
P+L + E+T S N+LN + ++ Y E++ E ++ C EN
Sbjct: 449 PELNKNDYEGEEITVSQKSPSPSLPPNELNEPEPDDMDGYKEAFNELRCLSYVQCLFENI 508
Query: 128 VASILEGL 135
+S+ E L
Sbjct: 509 TSSLNENL 516
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.9 bits (59), Expect = 0.84
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 25 QYAAAIEVGKKRPFNNSTELCAAFDNYLEELSTAEKNKVFKFHPDLAGKISQMGELTPES 84
++A A+E+ K R S A+D+ E T ++N V D + T ++
Sbjct: 357 EFAVAMEIIKLRLSGKSLASILAYDDNPTE-PTMQQNLV---SDDTNASTAVPVAFTNDN 412
Query: 85 TKEQNSAGLNQLNSEQKSLINHYNESYKEKFGFPFIVCARENKVASILEGLQIRLKNSSF 144
++ L+ ++E S +N S F P V EN +S LE LQ +N+SF
Sbjct: 413 V---SNVPLSVADNEPNSTLNLLASSDTAAFE-PTAVSLHENPSSS-LEDLQSAFQNTSF 467
Query: 145 QEYQTALNE 153
Q+ + N+
Sbjct: 468 QDQVSTQNQ 476
>SPBP35G2.05c |cki2||serine/threonine protein kinase
Cki2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 27.1 bits (57), Expect = 1.5
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 31 EVGKKRPFNNSTELCAAFDNYLEELSTAEKNKVFKFHPDLA 71
++ +K+ + +ELCA F N + T ++ F PD A
Sbjct: 232 KISEKKQSTSISELCAGFPNEFSKYMTYVRSLEFDEEPDYA 272
>SPAC1783.07c |pap1|caf3, caf3|transcription factor
Caf3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 552
Score = 26.6 bits (56), Expect = 1.9
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 40 NSTELCAAFDNYLEELSTAEK-NKVFKFHPDLAGKISQMGELTPESTKEQNSAGLNQLNS 98
NS E N L +A+ N ++ P L S G L+PE+ +S LN
Sbjct: 187 NSIEKPNMHQNVLHNDRSADNLNHRYQVPPTLVDSNSAQGTLSPETPSSSDSPSNLYLNY 246
Query: 99 EQKSLINH 106
++ I H
Sbjct: 247 PKRKSITH 254
>SPAC4G8.11c |atp10||F1-F0 ATPase assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 26.6 bits (56), Expect = 1.9
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 82 PESTKEQNSAGLNQLNSEQKSLINHYNESYKEKFGFPFIVCAREN 126
P KE+++ L N KSL N Y E YK+ G PF N
Sbjct: 108 PRLFKEKSA--LWMYNFHGKSLRNQYKELYKDWQGSPFFFALFSN 150
>SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 615
Score = 26.2 bits (55), Expect = 2.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 125 ENKVASILEGLQIRLKNSSFQEYQTALNEVKKICRYRIYD 164
E+K+AS L+ + + Q+Y T EV + C + D
Sbjct: 473 ESKIASFLQDVDLEKLGDRSQKYSTMYMEVWRQCSQNMLD 512
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 25.8 bits (54), Expect = 3.4
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 49 DNYLEELSTAEKNKVFKFHPDLAGKISQMGELTPESTKEQNSAGLNQLNSEQKSLINHYN 108
+N+ EEL KNK+ DL + + +L PE + N+ + SL+ +
Sbjct: 448 NNFFEEL----KNKL---ESDLY-LLDSVFDLVPEIRSLLQQFSTSSGNTRKTSLLGSNH 499
Query: 109 ESYKEKFGFPFIV 121
SY +K G P I+
Sbjct: 500 SSYSDKLGSPTIL 512
>SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase
Ubp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 25.8 bits (54), Expect = 3.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 34 KKRPFNNSTELCAAFDNYLEELSTAEK 60
K PF+ S +C + + Y E++S A K
Sbjct: 11 KSAPFHPSMVICYSLERYFEDVSLAYK 37
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 3.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 35 KRPFNNSTELCAAFDNYLEELSTAEKNKVFKFHPD 69
K P++ A NYL + S AEKN+V K +
Sbjct: 230 KDPWHRKCAFDAYILNYLTDQSDAEKNRVTKIRKE 264
>SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory
subunit Dfp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 545
Score = 24.6 bits (51), Expect = 7.8
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 83 ESTKEQNSAG--LNQLNSEQKSLINHYNESYKEKF 115
ES E +AG L NS QK+ + + YK+ F
Sbjct: 115 ESKAESMAAGKVLGSKNSSQKARLQEWKRQYKKAF 149
>SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1004
Score = 24.6 bits (51), Expect = 7.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 94 NQLNSEQKSLINHYNESYKEKFGFPFIVCARENKVASILEGLQ 136
N+L+SE +L+NHY + K + A + V LE LQ
Sbjct: 296 NKLSSESVALLNHYVSTEKTCGRVVRVQHAVQQDVKLALENLQ 338
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.131 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,773
Number of Sequences: 5004
Number of extensions: 32631
Number of successful extensions: 123
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 112
Number of HSP's gapped (non-prelim): 14
length of query: 169
length of database: 2,362,478
effective HSP length: 68
effective length of query: 101
effective length of database: 2,022,206
effective search space: 204242806
effective search space used: 204242806
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)
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