Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001176-TA|BGIBMGA001176-PA|undefined
(169 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22356| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 5e-20
SB_8796| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 33 0.12
SB_59285| Best HMM Match : SecIII_SopE_N (HMM E-Value=3.7) 31 0.38
SB_49301| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 31 0.38
SB_43594| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 31 0.38
SB_32006| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 31 0.38
SB_31068| Best HMM Match : DUF240 (HMM E-Value=2.1) 31 0.38
SB_22438| Best HMM Match : Glyco_hydro_67N (HMM E-Value=1.7) 31 0.38
SB_18936| Best HMM Match : Glyco_hydro_67N (HMM E-Value=7) 31 0.38
SB_16991| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 31 0.38
SB_15817| Best HMM Match : APOBEC_C (HMM E-Value=0.41) 31 0.38
SB_59692| Best HMM Match : CaMBD (HMM E-Value=7.5) 31 0.38
SB_55508| Best HMM Match : Glyco_hydro_67N (HMM E-Value=5.4) 31 0.38
SB_45439| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 31 0.38
SB_38333| Best HMM Match : Glyco_hydro_67N (HMM E-Value=6) 31 0.38
SB_20603| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 31 0.38
SB_12196| Best HMM Match : Glyco_hydro_67N (HMM E-Value=7.5) 31 0.38
SB_7026| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.38
SB_36027| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.50
SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023) 30 0.87
SB_9266| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_38666| Best HMM Match : DUF240 (HMM E-Value=2.2) 29 1.5
SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_59233| Best HMM Match : Involucrin (HMM E-Value=2.5) 29 2.6
SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_42933| Best HMM Match : Orexin_rec2 (HMM E-Value=4.9) 28 4.6
SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38) 28 4.6
SB_39386| Best HMM Match : RVT_1 (HMM E-Value=7.1e-28) 27 6.1
SB_38918| Best HMM Match : DUF997 (HMM E-Value=2.3) 27 6.1
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 27 6.1
SB_46531| Best HMM Match : Cu_amine_oxid (HMM E-Value=0) 27 6.1
SB_15557| Best HMM Match : Cu_amine_oxid (HMM E-Value=0) 27 6.1
SB_805| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_53339| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_4483| Best HMM Match : K-box (HMM E-Value=10) 27 8.1
SB_41425| Best HMM Match : DCX (HMM E-Value=8.6e-06) 27 8.1
SB_29969| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_22356| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 94.3 bits (224), Expect = 5e-20
Identities = 44/94 (46%), Positives = 64/94 (68%)
Query: 74 ISQMGELTPESTKEQNSAGLNQLNSEQKSLINHYNESYKEKFGFPFIVCARENKVASILE 133
++QM +LTPES EQ+ AGL++L+SE+ L++ N Y+ KF FPF++CAR+NK ILE
Sbjct: 1 MAQMKDLTPESKAEQSQAGLDKLSSEESILLSSSNSKYRAKFDFPFVICARKNKKEGILE 60
Query: 134 GLQIRLKNSSFQEYQTALNEVKKICRYRIYDIVD 167
G+Q RL N E + EVKKI R+ D+++
Sbjct: 61 GIQRRLLNDGDTELINGIAEVKKIMLLRLNDLLE 94
>SB_8796| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 204
Score = 33.1 bits (72), Expect = 0.12
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL QL + K +
Sbjct: 149 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYQLTTSLKKI 196
>SB_59285| Best HMM Match : SecIII_SopE_N (HMM E-Value=3.7)
Length = 204
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 149 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 196
>SB_49301| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 189
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 134 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 181
>SB_43594| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 342
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 287 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 334
>SB_32006| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 497
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 442 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 489
>SB_31068| Best HMM Match : DUF240 (HMM E-Value=2.1)
Length = 453
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 398 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 445
>SB_22438| Best HMM Match : Glyco_hydro_67N (HMM E-Value=1.7)
Length = 296
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 241 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 288
>SB_18936| Best HMM Match : Glyco_hydro_67N (HMM E-Value=7)
Length = 154
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 99 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 146
>SB_16991| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 258
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 203 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 250
>SB_15817| Best HMM Match : APOBEC_C (HMM E-Value=0.41)
Length = 248
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 193 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 240
>SB_59692| Best HMM Match : CaMBD (HMM E-Value=7.5)
Length = 204
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 149 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 196
>SB_55508| Best HMM Match : Glyco_hydro_67N (HMM E-Value=5.4)
Length = 154
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 99 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 146
>SB_45439| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 154
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 99 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 146
>SB_38333| Best HMM Match : Glyco_hydro_67N (HMM E-Value=6)
Length = 154
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 99 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 146
>SB_20603| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 204
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 149 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 196
>SB_12196| Best HMM Match : Glyco_hydro_67N (HMM E-Value=7.5)
Length = 160
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 105 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 152
>SB_7026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 31.5 bits (68), Expect = 0.38
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 77 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 124
>SB_36027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 31.1 bits (67), Expect = 0.50
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+TAEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 149 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSFKKI 196
>SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023)
Length = 873
Score = 30.3 bits (65), Expect = 0.87
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 52 LEELSTAEKNKVFKFHPDLAGKISQMGELTPES-TKEQNSAGLNQLNSEQKSLINHYNES 110
LE+ + ++ +K+ + D+ K + LT +KEQ L+Q N E++ +I N+
Sbjct: 475 LEQTNYSQASKISEHSEDVVVKQENVAALTKAVVSKEQQLLNLDQKNKEKEVVILEMNKR 534
Query: 111 YKEK 114
+EK
Sbjct: 535 IQEK 538
>SB_9266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1490
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 57 TAEKNKVFKFHP-DLAGKISQMGELTPESTKEQNSAGLNQLNS-EQKSLINHYNESYKEK 114
T+ + + +HP D G + Q LT + + N G + K L+ Y+E +++
Sbjct: 1057 TSSQKVSYSYHPYDTNGYVLQNDVLTEKDVEFYNHNGFFVVRKLVDKELLAKYHERFRQ- 1115
Query: 115 FGFPFIVCARENKVASILEGLQIRLKNSSFQEYQTALNEVK 155
+C + KV + + ++NS F + ++N+++
Sbjct: 1116 ------ICVGKVKVLGLTVMKDVSMRNSEFLPGERSINKIQ 1150
>SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1299
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 79 ELTPESTKEQN-SAGLNQLNSEQKSLINHYNESYKEKFGFP 118
E+ P++ +EQN SA L L++ K ++ H +EK GFP
Sbjct: 289 EVRPQTDQEQNTSAHLRLLSNSSKKMLLHGKRELEEK-GFP 328
>SB_38666| Best HMM Match : DUF240 (HMM E-Value=2.2)
Length = 239
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGLNQLNSEQKSL 103
+ AEK ++ FH D A I + L P KE +NS GL +L + K +
Sbjct: 184 ANAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGLYKLTTSLKKI 231
>SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1444
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 83 ESTKEQNSAGLNQLNSEQKSLINHYNESYKEKFGFPFIVCARENKV---ASILEGLQIRL 139
E++ ++ L +L S+Q+++ +E KE+ + A++NK+ ILE Q+
Sbjct: 294 ENSFQEQERHLERLISQQEAVYRQQSEQQKEQQRLREELAAQQNKIQEQLKILENFQLTR 353
Query: 140 KN---SSFQEYQTALNEVK 155
+N +S YQ +EV+
Sbjct: 354 ENEGVASDNSYQGGGDEVR 372
>SB_59233| Best HMM Match : Involucrin (HMM E-Value=2.5)
Length = 138
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 83 ESTKEQNSAGLNQLNSEQKSLINHYNESYKEKFGFPFIVCARENKV---ASILEGLQIRL 139
E++ ++ L +L S+Q+++ +E KE+ + A++NK+ ILE Q+
Sbjct: 15 ENSFQEQERHLERLISQQEAVYRQQSEQQKEQQRLREELAAQQNKIQEQLKILENFQLTR 74
Query: 140 KN---SSFQEYQTALNEVK 155
+N +S YQ +EV+
Sbjct: 75 ENEGVASDNSYQGGGDEVR 93
>SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 32 VGKKRPFNNSTELCAAFDNYLEELSTAEKNKVFKFHPDLAGKISQMGELTP-ESTKEQNS 90
VG N LC+ +L ++ +K+ +++ PDL +S +G+L + KE
Sbjct: 50 VGGCSEINGVQLLCSTSCLFLRDVLVPKKHYIWRREPDLWNTMSVIGQLREFDRQKESFE 109
Query: 91 AGLNQLNSEQKS 102
A + +L + K+
Sbjct: 110 AYIERLENFMKA 121
>SB_42933| Best HMM Match : Orexin_rec2 (HMM E-Value=4.9)
Length = 188
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 56 STAEKNKVFKFHPDLAGKISQMGELTPESTKE-QNSAGL 93
+TAEK ++ FH D A I + L P KE +NS GL
Sbjct: 149 ATAEKG-LYAFHYDEASWIESLDALVPVQVKEIKNSPGL 186
>SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38)
Length = 856
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 59 EKNKVFKFHPDLAGKISQMGELTP-ESTKEQNSAGLNQLNSEQKSL-INHYNESYKE 113
EK+ +++ PDL +S +G+L + KE A + +L + K+ + NE+YK+
Sbjct: 168 EKHYIWRREPDLWNTMSVIGQLREFDRQKESFEAYIERLENFMKANGVRKENETYKD 224
>SB_39386| Best HMM Match : RVT_1 (HMM E-Value=7.1e-28)
Length = 1239
Score = 27.5 bits (58), Expect = 6.1
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 55 LSTAEKNKVFKFHPDLAGKISQMGELTPESTKEQNSAGLNQLNSEQKSLINHYNESYKEK 114
+ A N + ++ + GK ELTP K L + ++ +KSL+N + S KEK
Sbjct: 782 IGDAAANLIKRWKEIVTGKPDNTSELTPTPVKLNTELLLQESDTARKSLLN-TSFSEKEK 840
>SB_38918| Best HMM Match : DUF997 (HMM E-Value=2.3)
Length = 860
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 128 VASILEGLQIRLKNSSFQEYQTALNEVKKICRYRIYDIVDEN 169
V I LQ RL + +++ TA+ + ++C Y D++ +N
Sbjct: 218 VLQIAHHLQWRLTKNLYRDISTAIEDFNRLCEYS-NDVLQDN 258
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 27.5 bits (58), Expect = 6.1
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 43 ELCAAFDNYLEELSTAEKNKVFKFHPDLAGKISQMGELTPESTKEQN 89
EL A D EL T+EK+KV K DL +Q+ + ES +N
Sbjct: 1217 ELQAQLDFSRNEL-TSEKSKVEKAEKDLVDAATQLSKAREESETHRN 1262
>SB_46531| Best HMM Match : Cu_amine_oxid (HMM E-Value=0)
Length = 900
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 50 NYLEELSTAEKNKVFKFHPDLAGKISQMGELTPESTKEQNSAGLNQLNSEQKSLINHYNE 109
N E + +N +F PD + + ++ S K+ L + N + +N +NE
Sbjct: 630 NSYETIEIGIENTTNRFMPDYPPHLFR--KVLKPSVKKTEQEALYKFNFDTPKYLNFFNE 687
Query: 110 SYKEKFG 116
K K G
Sbjct: 688 GKKNKMG 694
>SB_15557| Best HMM Match : Cu_amine_oxid (HMM E-Value=0)
Length = 1009
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 50 NYLEELSTAEKNKVFKFHPDLAGKISQMGELTPESTKEQNSAGLNQLNSEQKSLINHYNE 109
N E + +N +F PD + + ++ S K+ L + N + +N +NE
Sbjct: 772 NSYETIEIGIENTTNRFMPDYPPHLFR--KVLKPSVKKTEQEALYKFNFDTPKYLNFFNE 829
Query: 110 SYKEKFG 116
K K G
Sbjct: 830 GKKNKMG 836
>SB_805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1270
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 31 EVGKKRPFNNSTELCAAFDNYLEELSTAEKNKVFKFHPDLAGKISQMGELTPESTKEQNS 90
E +KR + LC N L + A +N++ H ++ E + + ++
Sbjct: 938 EASRKRLRDRHKALC----NRLRDRHEASRNRLRDRHEASRNRLRDRHEASRNRLRNRHE 993
Query: 91 AGLNQLNSEQKSLINHYNESYK 112
A N+L ++ N + + YK
Sbjct: 994 ASRNRLRDRHEASRNRFRDRYK 1015
>SB_53339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 894
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 1 MVWQDGGIYLCGLTIRLTNARWSSQYAAAIEVGKKRPFNNSTELCAAFDNYLEELSTAEK 60
+ W I C + WS + A +E+ K NS + A+ + + ++ AE
Sbjct: 91 LAWGTSMIMCCDYGFHVAVTWWSEEVAEEMEILVKEKGINSFKTFMAYKDVM-MINDAEM 149
Query: 61 NKVFKFHPDLAGKISQM----GELTPESTKEQNSAGL 93
+K ++ G I+Q+ G+L ES K+ + G+
Sbjct: 150 INCYKKCKEI-GAIAQVHAENGDLIDESAKKMIAMGI 185
>SB_4483| Best HMM Match : K-box (HMM E-Value=10)
Length = 100
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 83 ESTKEQNSAGLNQLNSEQKSLINHYNESYKEKF 115
E + S+G+ Q+ Q N+Y++S+ +KF
Sbjct: 54 EKIRTDASSGVKQIRHNQHGTKNYYSQSHADKF 86
>SB_41425| Best HMM Match : DCX (HMM E-Value=8.6e-06)
Length = 1098
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 75 SQMGELTPESTKEQNSAGLNQLNSEQKSLINHYNE 109
+Q+G+ S+KE S N++NSE K + +H E
Sbjct: 411 TQLGDQNMSSSKEIMSMSKNEVNSEIKEVDDHICE 445
>SB_29969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 83 ESTKEQNSAGLNQLNSEQKSLINHYNESYKEKF 115
E + S+G+ Q+ Q N+Y++S+ +KF
Sbjct: 52 EKIRTDASSGVKQIRHNQHGTKNYYSQSHADKF 84
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.131 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,598,888
Number of Sequences: 59808
Number of extensions: 207985
Number of successful extensions: 613
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 608
Number of HSP's gapped (non-prelim): 40
length of query: 169
length of database: 16,821,457
effective HSP length: 77
effective length of query: 92
effective length of database: 12,216,241
effective search space: 1123894172
effective search space used: 1123894172
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -