GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001176-TA|BGIBMGA001176-PA|undefined
         (169 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   1.6  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    24   2.8  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   5.0  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   6.6  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 90  SAGLNQLNSEQKSLINHYNESYKEKF 115
           SA  + LNS  K+LINH  E+  E +
Sbjct: 286 SADASPLNSYVKTLINHIEEAALEVY 311


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%)

Query: 103 LINHYNESYKEKFGFPFIVCARENKVASILEGLQIRLK 140
           L+ HY   Y E+ G   IV      VAS L G+ + +K
Sbjct: 128 LVLHY---YSERPGLEHIVIGIVKAVASKLHGVDVEIK 162


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 24  SQYAAAIEVGKKRPFNNSTELCAAFDNYLEELSTAEKNK 62
           + +  AI V K R  +NS +L  A +     L+  E+N+
Sbjct: 343 ASFKQAIHVNKHRLRDNSHQLVDALERQRAALAQEERNQ 381


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 11/45 (24%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 13  LTIRLTNARWSSQYAAAIEVGKKRPFNNSTELCAAFDNYLEELST 57
           +++  +  R+S +Y A + +     FN+++ L  A  N L+ ++T
Sbjct: 529 VSVARSRNRYSGRYCAVVTLDVTNAFNSASWLAIA--NALQRINT 571


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.131    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,971
Number of Sequences: 2123
Number of extensions: 5756
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 4
length of query: 169
length of database: 516,269
effective HSP length: 60
effective length of query: 109
effective length of database: 388,889
effective search space: 42388901
effective search space used: 42388901
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)