GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001176-TA|BGIBMGA001176-PA|undefined
         (169 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022876-1|AAY55292.1|  897|Drosophila melanogaster IP12850p pro...    31   1.1  
BT022840-1|AAY55256.1|  897|Drosophila melanogaster IP12950p pro...    31   1.1  
BT022813-1|AAY55229.1|  897|Drosophila melanogaster IP13150p pro...    31   1.1  
AE014297-3732|ABI31207.1|  897|Drosophila melanogaster CG34110-P...    31   1.1  
AE014134-2538|AAF53422.1| 1801|Drosophila melanogaster CG3491-PA...    30   1.4  
M24441-1|AAA28652.1|  975|Drosophila melanogaster protein ( D.me...    29   4.3  
AY094959-1|AAM11312.1|  975|Drosophila melanogaster SD02406p pro...    29   4.3  
AY061309-1|AAL28857.1|  940|Drosophila melanogaster LD22446p pro...    29   4.3  
AE014134-1636|AAF52774.1|  940|Drosophila melanogaster CG3766-PA...    29   4.3  
AE013599-2234|AAF58029.1|  975|Drosophila melanogaster CG7765-PA...    29   4.3  

>BT022876-1|AAY55292.1|  897|Drosophila melanogaster IP12850p
           protein.
          Length = 897

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/61 (31%), Positives = 27/61 (44%)

Query: 53  EELSTAEKNKVFKFHPDLAGKISQMGELTPESTKEQNSAGLNQLNSEQKSLINHYNESYK 112
           EEL     +K   F            ELTPE ++   +A LN L S   SL+N+    Y+
Sbjct: 752 EELKKEIASKPADFLAPYLVPYKHQEELTPEQSQNAYNACLNDLKSRFVSLLNNLQRHYE 811

Query: 113 E 113
           +
Sbjct: 812 D 812


>BT022840-1|AAY55256.1|  897|Drosophila melanogaster IP12950p
           protein.
          Length = 897

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/61 (31%), Positives = 27/61 (44%)

Query: 53  EELSTAEKNKVFKFHPDLAGKISQMGELTPESTKEQNSAGLNQLNSEQKSLINHYNESYK 112
           EEL     +K   F            ELTPE ++   +A LN L S   SL+N+    Y+
Sbjct: 752 EELKKEIASKPADFLAPYLVPYKHQEELTPEQSQNAYNACLNDLKSRFVSLLNNLQRHYE 811

Query: 113 E 113
           +
Sbjct: 812 D 812


>BT022813-1|AAY55229.1|  897|Drosophila melanogaster IP13150p
           protein.
          Length = 897

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/61 (31%), Positives = 27/61 (44%)

Query: 53  EELSTAEKNKVFKFHPDLAGKISQMGELTPESTKEQNSAGLNQLNSEQKSLINHYNESYK 112
           EEL     +K   F            ELTPE ++   +A LN L S   SL+N+    Y+
Sbjct: 752 EELKKEIASKPADFLAPYLVPYKHQEELTPEQSQNAYNACLNDLKSRFVSLLNNLQRHYE 811

Query: 113 E 113
           +
Sbjct: 812 D 812


>AE014297-3732|ABI31207.1|  897|Drosophila melanogaster CG34110-PC
           protein.
          Length = 897

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/61 (31%), Positives = 27/61 (44%)

Query: 53  EELSTAEKNKVFKFHPDLAGKISQMGELTPESTKEQNSAGLNQLNSEQKSLINHYNESYK 112
           EEL     +K   F            ELTPE ++   +A LN L S   SL+N+    Y+
Sbjct: 752 EELKKEIASKPADFLAPYLVPYKHQEELTPEQSQNAYNACLNDLKSRFVSLLNNLQRHYE 811

Query: 113 E 113
           +
Sbjct: 812 D 812


>AE014134-2538|AAF53422.1| 1801|Drosophila melanogaster CG3491-PA
           protein.
          Length = 1801

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 53  EELSTAEKNKVFKFHPDLAGKISQMGELTPESTKEQNSAGLNQLNSEQKSLINHYNE 109
           E L   ++N +FK  P+++ KI+        ST ++      +LNS  +S++N Y+E
Sbjct: 156 ENLDEPDQNTIFK-KPEVSSKINLEKHNQRTSTDKEKQYKGQKLNSSIESILNVYDE 211


>M24441-1|AAA28652.1|  975|Drosophila melanogaster protein (
           D.melanogaster kinesinheavy chain mRNA, complete cds. ).
          Length = 975

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/58 (24%), Positives = 33/58 (56%), Gaps = 3/58 (5%)

Query: 23  SSQYAAAIEVGKKRPFNNSTELCAAFDNYLEELSTAEKNKVFKFHPDLAGKISQMGEL 80
           ++++ +A+   +K+    + EL + FD+ ++EL  A   +V +   ++A K  +M E+
Sbjct: 700 AAEHVSAVNAEEKQ---RAEELRSMFDSQMDELREAHTRQVSELRDEIAAKQHEMDEM 754


>AY094959-1|AAM11312.1|  975|Drosophila melanogaster SD02406p
           protein.
          Length = 975

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/58 (24%), Positives = 33/58 (56%), Gaps = 3/58 (5%)

Query: 23  SSQYAAAIEVGKKRPFNNSTELCAAFDNYLEELSTAEKNKVFKFHPDLAGKISQMGEL 80
           ++++ +A+   +K+    + EL + FD+ ++EL  A   +V +   ++A K  +M E+
Sbjct: 700 AAEHVSAVNAEEKQ---RAEELRSMFDSQMDELREAHTRQVSELRDEIAAKQHEMDEM 754


>AY061309-1|AAL28857.1|  940|Drosophila melanogaster LD22446p
           protein.
          Length = 940

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 121 VCARENKVASILEGLQIRLKNSSF-QEY-QTALNEVKKICRYRIYDIV 166
           VCA E+K+ +I+ GL +R +N SF Q Y Q A+  ++ I +  + +++
Sbjct: 440 VCAEEDKLVAIVMGL-LRKQNFSFVQAYQQEAIATIRAIIKQLLIEVL 486


>AE014134-1636|AAF52774.1|  940|Drosophila melanogaster CG3766-PA
           protein.
          Length = 940

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 121 VCARENKVASILEGLQIRLKNSSF-QEY-QTALNEVKKICRYRIYDIV 166
           VCA E+K+ +I+ GL +R +N SF Q Y Q A+  ++ I +  + +++
Sbjct: 440 VCAEEDKLVAIVMGL-LRKQNFSFVQAYQQEAIATIRAIIKQLLIEVL 486


>AE013599-2234|AAF58029.1|  975|Drosophila melanogaster CG7765-PA
           protein.
          Length = 975

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/58 (24%), Positives = 33/58 (56%), Gaps = 3/58 (5%)

Query: 23  SSQYAAAIEVGKKRPFNNSTELCAAFDNYLEELSTAEKNKVFKFHPDLAGKISQMGEL 80
           ++++ +A+   +K+    + EL + FD+ ++EL  A   +V +   ++A K  +M E+
Sbjct: 700 AAEHVSAVNAEEKQ---RAEELRSMFDSQMDELREAHTRQVSELRDEIAAKQHEMDEM 754


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.131    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,181,935
Number of Sequences: 52641
Number of extensions: 311216
Number of successful extensions: 924
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 920
Number of HSP's gapped (non-prelim): 10
length of query: 169
length of database: 24,830,863
effective HSP length: 80
effective length of query: 89
effective length of database: 20,619,583
effective search space: 1835142887
effective search space used: 1835142887
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)