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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001174-TA|BGIBMGA001174-PA|IPR001251|Cellular
retinaldehyde-binding/triple function, C-terminal,
IPR011074|Phosphatidylinositol transfer protein-like, N-terminal
         (218 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)               43   2e-04
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.3  
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.3  
SB_12450| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.3  
SB_59274| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17)                  29   3.0  
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)                28   5.2  
SB_24982| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.2  
SB_44983| Best HMM Match : Death (HMM E-Value=4.8e-09)                 28   6.9  
SB_24939| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.9  
SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0)                 27   9.1  

>SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 640

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 18/46 (39%), Positives = 28/46 (60%)

Query: 150 LKNLIWLLSRHYPERLGVCLIINAPTFFSGCWTVIKGWLDENTAGK 195
           L  +I ++  +YPE +G  LI+ AP  F   WT++  ++DENT  K
Sbjct: 5   LLRVIEMVEVNYPETMGRLLIVRAPRIFGVLWTLVSPFIDENTRNK 50


>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6863

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 11/58 (18%), Positives = 27/58 (46%)

Query: 10   EEDLKQLKERMNLIASADPAQYHNSYSLKRYLRAFHTAILKTNKWRVEYGVADLHNNK 67
            +E +  L  R  ++ +   A  HN    +R L+ F  +  K   W ++  ++++  ++
Sbjct: 1034 KETMNTLNTRWKVVRTGVDAHMHNLSECQRLLQQFEESARKVRTWTIDSNISEISEDE 1091


>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2916

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 1    MAEELKPVNEEDLKQLKERMNLIAS--ADPAQYHNSYSLKRYLRAFHTAILKTNKWRVEY 58
            ++EEL   N E    ++ER   +A   A   +  NS S K          +K +K R + 
Sbjct: 1809 LSEELMRANNEKEDIIRERETTVADLEAQIIELTNSVSTKEKSVTQEIETIKRDKERADK 1868

Query: 59   GVADLHNNKELIEK 72
             +  L +NK+ +EK
Sbjct: 1869 EMEQLRSNKKNLEK 1882


>SB_12450| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 333

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 26  ADPAQYHNSYSLKRYLRAFHT---AILKTNKWRVEYGVADLHNNK 67
           A PAQ H+S+S+ +Y R+F T    ++ T    V +G+  + N++
Sbjct: 177 ASPAQRHHSFSVSKYKRSFATMLYVVVFTVLCYVPFGLVSVLNDR 221


>SB_59274| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 341

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 7/69 (10%)

Query: 16  LKERMNLIASADP-AQYHNSYSLKRYLRAFHTAILKTNKWRVEYGVADLHNNKELIEKYS 74
           L+E++ LI  A+  A Y N     + L+  H A      W+ + G       +E+ +K+S
Sbjct: 56  LEEKLKLIERAETLATYENVNDAFKELQQLHKA------WKEDVGPVSKEQREEVWQKFS 109

Query: 75  DKAKVLRHR 83
           D +K +  R
Sbjct: 110 DASKKVHDR 118


>SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17)
          Length = 1440

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 21/69 (30%), Positives = 29/69 (42%)

Query: 42  RAFHTAILKTNKWRVEYGVADLHNNKELIEKYSDKAKVLRHRDAIGRPIIYIPAKNYNSS 101
           + FH  + K N    EY      N +ELIE + D  + ++ R+A G  I  I     N  
Sbjct: 578 KVFHKPMKKMNIMPYEYIKKLFPNLQELIEIHGDLLQSMKKREAEGEVIQCIGDIMLNRF 637

Query: 102 DRNIDELTK 110
           D    E  K
Sbjct: 638 DNEAGEAAK 646


>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
          Length = 3891

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 120  SNKCFEEVVDNLCIVFDLNNFTLSCMDYQILKN 152
            SN CF+ V   LC++    N   +C D   L N
Sbjct: 2885 SNPCFKHVCTGLCLLTPQGNHRCACADNMHLAN 2917


>SB_24982| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 533

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/41 (29%), Positives = 23/41 (56%)

Query: 36  SLKRYLRAFHTAILKTNKWRVEYGVADLHNNKELIEKYSDK 76
           S++ +L  FHT  +  N  +++Y   +L   KE + K+S +
Sbjct: 81  SMRVFLLQFHTGFINPNATKLKYSREELDIAKEDVVKFSSR 121


>SB_44983| Best HMM Match : Death (HMM E-Value=4.8e-09)
          Length = 868

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 19/85 (22%), Positives = 36/85 (42%)

Query: 96  KNYNSSDRNIDELTKFIVYCLEVASNKCFEEVVDNLCIVFDLNNFTLSCMDYQILKNLIW 155
           K Y     N++++  + V+  ++  ++  E V+D L  V  L    L   +++ L + I+
Sbjct: 653 KQYFQEKPNLNQILNWCVFDCDLDDDEVREHVLDTLVDVVVLLMKVLRRNEFEALFSRIY 712

Query: 156 LLSRHYPERLGVCLIINAPTFFSGC 180
            LS     R   C+I         C
Sbjct: 713 HLSSRNKARAVTCVIFLGANIVLSC 737


>SB_24939| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 868

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 11/74 (14%)

Query: 29  AQYHNSYSLKRYLRAFHTAILKTNKWR----VEYGVADLHNNKELIEKY----SDKAKVL 80
           A+Y     L RY + +H  +L+T  WR     EYG   L ++  L+ +Y     D ++ +
Sbjct: 569 ARYRKGCPLARYRKGYHPELLQT--WRRAGPFEYG-NRLQDSPHLVRRYYLFAGDDSQNI 625

Query: 81  RHRDAIGRPIIYIP 94
           +     G P++ +P
Sbjct: 626 QVHFKSGFPVVTVP 639


>SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0)
          Length = 1127

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 13/49 (26%), Positives = 23/49 (46%)

Query: 90  IIYIPAKNYNSSDRNIDELTKFIVYCLEVASNKCFEEVVDNLCIVFDLN 138
           + Y+P  +Y SS R +    +F  +   +AS+      + +L  VF  N
Sbjct: 194 LFYVPVVDYLSSSRLLSNRIRFKYFLRTIASDSLLSRAIVDLLRVFRWN 242


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.322    0.138    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,625,546
Number of Sequences: 59808
Number of extensions: 305687
Number of successful extensions: 855
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 847
Number of HSP's gapped (non-prelim): 11
length of query: 218
length of database: 16,821,457
effective HSP length: 79
effective length of query: 139
effective length of database: 12,096,625
effective search space: 1681430875
effective search space used: 1681430875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)

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