BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001174-TA|BGIBMGA001174-PA|IPR001251|Cellular retinaldehyde-binding/triple function, C-terminal, IPR011074|Phosphatidylinositol transfer protein-like, N-terminal (218 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04 SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3 SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3 SB_12450| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3 SB_59274| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17) 29 3.0 SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 28 5.2 SB_24982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2 SB_44983| Best HMM Match : Death (HMM E-Value=4.8e-09) 28 6.9 SB_24939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9 SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 9.1 >SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 640 Score = 43.2 bits (97), Expect = 2e-04 Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 150 LKNLIWLLSRHYPERLGVCLIINAPTFFSGCWTVIKGWLDENTAGK 195 L +I ++ +YPE +G LI+ AP F WT++ ++DENT K Sbjct: 5 LLRVIEMVEVNYPETMGRLLIVRAPRIFGVLWTLVSPFIDENTRNK 50 >SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 6863 Score = 29.5 bits (63), Expect = 2.3 Identities = 11/58 (18%), Positives = 27/58 (46%) Query: 10 EEDLKQLKERMNLIASADPAQYHNSYSLKRYLRAFHTAILKTNKWRVEYGVADLHNNK 67 +E + L R ++ + A HN +R L+ F + K W ++ ++++ ++ Sbjct: 1034 KETMNTLNTRWKVVRTGVDAHMHNLSECQRLLQQFEESARKVRTWTIDSNISEISEDE 1091 >SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2916 Score = 29.5 bits (63), Expect = 2.3 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%) Query: 1 MAEELKPVNEEDLKQLKERMNLIAS--ADPAQYHNSYSLKRYLRAFHTAILKTNKWRVEY 58 ++EEL N E ++ER +A A + NS S K +K +K R + Sbjct: 1809 LSEELMRANNEKEDIIRERETTVADLEAQIIELTNSVSTKEKSVTQEIETIKRDKERADK 1868 Query: 59 GVADLHNNKELIEK 72 + L +NK+ +EK Sbjct: 1869 EMEQLRSNKKNLEK 1882 >SB_12450| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 333 Score = 29.5 bits (63), Expect = 2.3 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 3/45 (6%) Query: 26 ADPAQYHNSYSLKRYLRAFHT---AILKTNKWRVEYGVADLHNNK 67 A PAQ H+S+S+ +Y R+F T ++ T V +G+ + N++ Sbjct: 177 ASPAQRHHSFSVSKYKRSFATMLYVVVFTVLCYVPFGLVSVLNDR 221 >SB_59274| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 341 Score = 29.1 bits (62), Expect = 3.0 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 7/69 (10%) Query: 16 LKERMNLIASADP-AQYHNSYSLKRYLRAFHTAILKTNKWRVEYGVADLHNNKELIEKYS 74 L+E++ LI A+ A Y N + L+ H A W+ + G +E+ +K+S Sbjct: 56 LEEKLKLIERAETLATYENVNDAFKELQQLHKA------WKEDVGPVSKEQREEVWQKFS 109 Query: 75 DKAKVLRHR 83 D +K + R Sbjct: 110 DASKKVHDR 118 >SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17) Length = 1440 Score = 29.1 bits (62), Expect = 3.0 Identities = 21/69 (30%), Positives = 29/69 (42%) Query: 42 RAFHTAILKTNKWRVEYGVADLHNNKELIEKYSDKAKVLRHRDAIGRPIIYIPAKNYNSS 101 + FH + K N EY N +ELIE + D + ++ R+A G I I N Sbjct: 578 KVFHKPMKKMNIMPYEYIKKLFPNLQELIEIHGDLLQSMKKREAEGEVIQCIGDIMLNRF 637 Query: 102 DRNIDELTK 110 D E K Sbjct: 638 DNEAGEAAK 646 >SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) Length = 3891 Score = 28.3 bits (60), Expect = 5.2 Identities = 12/33 (36%), Positives = 16/33 (48%) Query: 120 SNKCFEEVVDNLCIVFDLNNFTLSCMDYQILKN 152 SN CF+ V LC++ N +C D L N Sbjct: 2885 SNPCFKHVCTGLCLLTPQGNHRCACADNMHLAN 2917 >SB_24982| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 533 Score = 28.3 bits (60), Expect = 5.2 Identities = 12/41 (29%), Positives = 23/41 (56%) Query: 36 SLKRYLRAFHTAILKTNKWRVEYGVADLHNNKELIEKYSDK 76 S++ +L FHT + N +++Y +L KE + K+S + Sbjct: 81 SMRVFLLQFHTGFINPNATKLKYSREELDIAKEDVVKFSSR 121 >SB_44983| Best HMM Match : Death (HMM E-Value=4.8e-09) Length = 868 Score = 27.9 bits (59), Expect = 6.9 Identities = 19/85 (22%), Positives = 36/85 (42%) Query: 96 KNYNSSDRNIDELTKFIVYCLEVASNKCFEEVVDNLCIVFDLNNFTLSCMDYQILKNLIW 155 K Y N++++ + V+ ++ ++ E V+D L V L L +++ L + I+ Sbjct: 653 KQYFQEKPNLNQILNWCVFDCDLDDDEVREHVLDTLVDVVVLLMKVLRRNEFEALFSRIY 712 Query: 156 LLSRHYPERLGVCLIINAPTFFSGC 180 LS R C+I C Sbjct: 713 HLSSRNKARAVTCVIFLGANIVLSC 737 >SB_24939| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 868 Score = 27.9 bits (59), Expect = 6.9 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 11/74 (14%) Query: 29 AQYHNSYSLKRYLRAFHTAILKTNKWR----VEYGVADLHNNKELIEKY----SDKAKVL 80 A+Y L RY + +H +L+T WR EYG L ++ L+ +Y D ++ + Sbjct: 569 ARYRKGCPLARYRKGYHPELLQT--WRRAGPFEYG-NRLQDSPHLVRRYYLFAGDDSQNI 625 Query: 81 RHRDAIGRPIIYIP 94 + G P++ +P Sbjct: 626 QVHFKSGFPVVTVP 639 >SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0) Length = 1127 Score = 27.5 bits (58), Expect = 9.1 Identities = 13/49 (26%), Positives = 23/49 (46%) Query: 90 IIYIPAKNYNSSDRNIDELTKFIVYCLEVASNKCFEEVVDNLCIVFDLN 138 + Y+P +Y SS R + +F + +AS+ + +L VF N Sbjct: 194 LFYVPVVDYLSSSRLLSNRIRFKYFLRTIASDSLLSRAIVDLLRVFRWN 242 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.322 0.138 0.425 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,625,546 Number of Sequences: 59808 Number of extensions: 305687 Number of successful extensions: 855 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 847 Number of HSP's gapped (non-prelim): 11 length of query: 218 length of database: 16,821,457 effective HSP length: 79 effective length of query: 139 effective length of database: 12,096,625 effective search space: 1681430875 effective search space used: 1681430875 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 58 (27.5 bits)
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