Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001174-TA|BGIBMGA001174-PA|IPR001251|Cellular
retinaldehyde-binding/triple function, C-terminal,
IPR011074|Phosphatidylinositol transfer protein-like, N-terminal
(218 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H8.02 |||sec14 cytosolic factor family|Schizosaccharomyces ... 101 1e-22
SPAC589.09 |||sec14 cytosolic factor family|Schizosaccharomyces ... 99 4e-22
SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family Sec14|Schi... 63 3e-11
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 50 2e-07
SPBC365.01 |||sec14 cytosolic factor family |Schizosaccharomyces... 47 2e-06
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 28 1.2
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 27 2.1
SPBC21.07c |ppk24||serine/threonine protein kinase Ppk24|Schizos... 27 2.1
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 26 4.9
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 26 4.9
SPAC25G10.08 |||translation initiation factor eIF3b |Schizosacch... 25 8.6
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 25 8.6
>SPAC3H8.02 |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 101 bits (241), Expect = 1e-22
Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 9/172 (5%)
Query: 49 LKTNKWRV-EYGVADLHNNKELIEKYSDKAKVLR-------HRDAIGRPIIYIPAKNYNS 100
+KT WR E V ++ N + ++K D + LR D RP+ YI A+ +
Sbjct: 146 MKTVHWRSREMNVGEIVCNADHLDKDDDFVRQLRIGKCFIFGEDKHNRPVCYIRARLHKV 205
Query: 101 SDRNIDELTKFIVYCLEVASNKCFEEVVDNLCIVFDLNNFTLSCMDYQILKNLIWLLSRH 160
D + + + + V+ +E A + ++ +VFD+ +F++S MDY LK +I H
Sbjct: 206 GDVSPESVERLTVWVMETA-RLILKPPIETATVVFDMTDFSMSNMDYGPLKFMIKCFEAH 264
Query: 161 YPERLGVCLIINAPTFFSGCWTVIKGWLDENTAGKVTFVSSEMDLCKYFIPD 212
YPE LG C++ AP F G W++IK WLD KV F + DL +Y PD
Sbjct: 265 YPECLGECIVHKAPWLFQGVWSIIKSWLDPVVVSKVKFTRNYRDLQQYINPD 316
>SPAC589.09 |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 388
Score = 99.1 bits (236), Expect = 4e-22
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 48 ILKTNKWRVEYGVADLHNNKELIEKYSDKAKVLRH----------RDAIGRPIIYIPAKN 97
++ T +WRV+ GV + EL K ++ + L RD RPI YI
Sbjct: 101 LINTLQWRVDTGVERIVERGELYAKETNDDQFLEQLRTGKVTMLGRDLSDRPICYIQVHL 160
Query: 98 YNSSDRNIDELTKFIVYCLE-----VASNKCFEEVVD---NLCIVFDLNNFTLSCMDYQI 149
+ S + L + V+ +E + K ++ +D N+ ++FDL+NF+L MDY
Sbjct: 161 HQPSKLTQNSLREMTVWVMETMRLFLRPQKTLKDSMDSPQNVNVLFDLSNFSLHNMDYSF 220
Query: 150 LKNLIWLLSRHYPERLGVCLIINAPTFFSGCWTVIKGWLDENTAGKVTFVSSEMDLCKYF 209
+K L L +YP+ LGVC++ +P F W +IKGW+ A K+ F S DL KY
Sbjct: 221 VKYLASCLEYYYPQSLGVCILHKSPWIFRSVWNIIKGWIKPEIAAKIVFTQSANDLEKYI 280
Query: 210 IPDILPTDM 218
++PT +
Sbjct: 281 DYSVIPTSL 289
>SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family
Sec14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 286
Score = 63.3 bits (147), Expect = 3e-11
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 49 LKTNKWRVEYGVADLHNN-----KELIEKYSDKAKVLRHRDAIGRPIIYIPAKNYNSSD- 102
+K KWR E+GV DL N KE + KY + D GRP+ N +
Sbjct: 72 IKCEKWRKEFGVDDLIKNFHYDEKEAVSKYYPQ--FYHKTDIDGRPVYVEQLGNIDLKKL 129
Query: 103 ---RNIDELTKFIVYCLEVASNKCFEE-------VVDNLCIVFDLNNFTLSCMD--YQIL 150
+ + + +VY E+ + K F +++ C + DL ++ + Y +
Sbjct: 130 YQITTPERMMQNLVYEYEMLALKRFPACSRKAGGLIETSCTIMDLKGVGITSIHSVYSYI 189
Query: 151 KNLIWLLSRHYPERLGVCLIINAPTFFSGCWTVIKGWLDENTAGKVTFVSS 201
+ + +YPER+G +INAP FS + +IKG+LDE T K+ + S
Sbjct: 190 RQASSISQDYYPERMGKFYVINAPWGFSSAFNLIKGFLDEATVKKIHILGS 240
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 50.4 bits (115), Expect = 2e-07
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 39 RYLRA--FHTA-----ILKTNKWRVEYGVADLHNNKELIEKYSDKAKVLRHRDAIGRPII 91
RYLRA +H + I+ T WR +GV ++ + E+ E+ + +VL D GRP +
Sbjct: 640 RYLRATKWHVSNAKKRIVDTLVWRRHFGVNNMDPD-EIQEENATGKQVLLGYDKDGRPCL 698
Query: 92 YIPAKNYNSSDRNIDELTKFIVYCLEVASNKCFEEVVDNLCIVFDLNNFT-LSCMDYQIL 150
Y+ N+ + + +V+ LE A + V+ L ++ + + + S
Sbjct: 699 YLYPARQNTKTSPLQ--IRHLVFSLECAID-LMPPGVETLALLINFKSSSNRSNPSVGQG 755
Query: 151 KNLIWLLSRHYPERLGVCLIINAPTFFSGCWTVIKGWLDENTAGKVTF 198
K ++ +L HY ERLG L+IN P G + +I ++D T K+ F
Sbjct: 756 KEVLNILQTHYCERLGRALVINIPWAVWGFFKLISPFIDPITREKLKF 803
>SPBC365.01 |||sec14 cytosolic factor family |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 47.2 bits (107), Expect = 2e-06
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 83 RDAIGRPIIYIPAKNY--NSSDRNIDELTKFIVYCLEVASNKCFEE--VVDNLCIVFDLN 138
+D GR I+++ N+ + ++++EL I+Y +E A E + + DL
Sbjct: 111 QDKKGRAIVFLNLHNFIPPKNTKDMEELKALILYAMENARLFLDSEQNAAKGVLGLVDLT 170
Query: 139 NFTLSCMDYQILKNLIWLLSRHYPERLGVCLIINAP---TFFSGCWTVIKGWLDENTAGK 195
F+ +D + +YPE LG LI+ + F G W++ K +LD K
Sbjct: 171 YFSRKNIDLDFARVFAETFQNYYPEILGQALIVGSGFRMALFEGVWSIGKYFLDPEVRSK 230
Query: 196 VTF 198
VTF
Sbjct: 231 VTF 233
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 136 DLNNFTLSCMDYQILKNLIWLLSRHYPERLGVCLIINAPTFFSGCWTVIKGWLDENTAGK 195
D+++ L+ + +Q K I H E + L N P C KGW D K
Sbjct: 136 DIHDVDLAKLPFQDEKLGIVYSDEHAQEESNLLLQFNCPE--DACDITCKGWFDLKLHAK 193
Query: 196 VTFVSSEMDLC 206
V DLC
Sbjct: 194 VKHHKFFCDLC 204
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 142 LSCMDYQILKNLIWLLSRHYPERLGVCLIINAPTFFSG 179
L C+ I+ L+WL+S + E LG + I P + SG
Sbjct: 762 LICLSLWIIGQLLWLISAYNLEMLGKSVFI--PLWLSG 797
>SPBC21.07c |ppk24||serine/threonine protein kinase
Ppk24|Schizosaccharomyces pombe|chr 2|||Manual
Length = 461
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 62 DLHNNKELIEKYSDKAKVLRHRDAIGRPIIYIPAKNYNSSDRNIDELTKFIVYCL 116
D + K + + + KV+ HRD I IY AK Y + + + +VY L
Sbjct: 119 DFQHLKSIAKGATSTIKVVTHRDKITDAKIYYAAKVYRKTKTSHKKRLNTMVYFL 173
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1207
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 4 ELKPVNEEDLKQLKERMNLIASADPAQYHNSYSLKRYLRAFH 45
E + + EED K+ E ASAD H+ +L+ + A H
Sbjct: 1059 ERRRLGEEDTKRALELSYYFASADLQPMHSIIALRLAINASH 1100
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 63 LHNNKELIEKYSDKAKVLRHRDAIGRPIIYI-PAKNYNSSDR 103
+HN + +K S++ V + RP++++ KN S +R
Sbjct: 1635 IHNKPPIYQKVSEQQNVRPKSSGVSRPLLFLQQQKNLPSENR 1676
>SPAC25G10.08 |||translation initiation factor eIF3b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 725
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 71 EKYSDK--AKVLRHRDAIGRPIIYIPAKNYNSSDRNIDEL 108
+KY D+ A+V R G+P I +PA+ ++E+
Sbjct: 676 QKYRDEVIARVAEERAITGQPAITVPAEEEEIIQETVEEV 715
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 25.0 bits (52), Expect = 8.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 105 IDELTKFIVYCLEVASNKCFEEVVDNLCIVFDLNNFTLSCMDYQILKNLI 154
++ L K Y L+ + E+ + + LN LSC DY+ L+NLI
Sbjct: 727 LELLKKSTRYLLQFGLSTSLEQQIPTPYWLAPLN---LSCTDYRFLENLI 773
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.138 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,101,574
Number of Sequences: 5004
Number of extensions: 48082
Number of successful extensions: 156
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 145
Number of HSP's gapped (non-prelim): 13
length of query: 218
length of database: 2,362,478
effective HSP length: 70
effective length of query: 148
effective length of database: 2,012,198
effective search space: 297805304
effective search space used: 297805304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 52 (25.0 bits)
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