BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001174-TA|BGIBMGA001174-PA|IPR001251|Cellular retinaldehyde-binding/triple function, C-terminal, IPR011074|Phosphatidylinositol transfer protein-like, N-terminal (218 letters) Database: celegans 27,539 sequences; 12,573,161 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z74041-4|CAD56597.1| 394|Caenorhabditis elegans Hypothetical pr... 49 2e-06 Z74041-3|CAA98522.1| 368|Caenorhabditis elegans Hypothetical pr... 49 2e-06 U32305-16|AAN63464.1| 275|Caenorhabditis elegans Hypothetical p... 45 4e-05 U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical p... 45 4e-05 Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical pr... 43 2e-04 Z79753-3|CAB02088.1| 377|Caenorhabditis elegans Hypothetical pr... 40 0.001 Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical pr... 39 0.003 AF077545-3|AAC26304.1| 396|Caenorhabditis elegans Hypothetical ... 36 0.022 Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical pr... 34 0.091 Z92970-3|CAB07482.1| 383|Caenorhabditis elegans Hypothetical pr... 33 0.16 U58734-6|AAB52505.3| 383|Caenorhabditis elegans Hypothetical pr... 33 0.16 U88176-2|AAO91740.3| 550|Caenorhabditis elegans Hypothetical pr... 32 0.28 Z81516-6|CAB04206.1| 524|Caenorhabditis elegans Hypothetical pr... 31 0.48 Z75535-5|CAA99829.1| 524|Caenorhabditis elegans Hypothetical pr... 31 0.48 AC006835-1|AAF40015.2| 903|Caenorhabditis elegans Hypothetical ... 31 0.64 Z69793-4|CAA93675.3| 382|Caenorhabditis elegans Hypothetical pr... 31 0.84 Z46996-9|CAA87097.2| 400|Caenorhabditis elegans Hypothetical pr... 31 0.84 Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical pr... 30 1.5 Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 29 3.4 Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 29 3.4 AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 29 3.4 AF003130-7|AAO38638.1| 247|Caenorhabditis elegans Dehydrogenase... 28 4.5 AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenase... 28 4.5 AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenase... 28 4.5 U23514-3|AAC46542.2| 421|Caenorhabditis elegans Hypothetical pr... 28 5.9 U23514-2|AAM48532.1| 418|Caenorhabditis elegans Hypothetical pr... 28 5.9 AC006662-3|AAF39895.1| 368|Caenorhabditis elegans Hypothetical ... 28 5.9 >Z74041-4|CAD56597.1| 394|Caenorhabditis elegans Hypothetical protein T03F7.7b protein. Length = 394 Score = 49.2 bits (112), Expect = 2e-06 Identities = 23/70 (32%), Positives = 39/70 (55%) Query: 148 QILKNLIWLLSRHYPERLGVCLIINAPTFFSGCWTVIKGWLDENTAGKVTFVSSEMDLCK 207 Q+ + ++ + + ++ E L L+IN P S W V K +D NT K+ F+S+ DL K Sbjct: 180 QLARLVVQVWAEYFSEHLCKLLLINPPGIISVMWQVTKRLVDPNTVEKLAFLSNVEDLKK 239 Query: 208 YFIPDILPTD 217 Y P+ +P + Sbjct: 240 YLEPEAIPVE 249 >Z74041-3|CAA98522.1| 368|Caenorhabditis elegans Hypothetical protein T03F7.7a protein. Length = 368 Score = 49.2 bits (112), Expect = 2e-06 Identities = 23/70 (32%), Positives = 39/70 (55%) Query: 148 QILKNLIWLLSRHYPERLGVCLIINAPTFFSGCWTVIKGWLDENTAGKVTFVSSEMDLCK 207 Q+ + ++ + + ++ E L L+IN P S W V K +D NT K+ F+S+ DL K Sbjct: 180 QLARLVVQVWAEYFSEHLCKLLLINPPGIISVMWQVTKRLVDPNTVEKLAFLSNVEDLKK 239 Query: 208 YFIPDILPTD 217 Y P+ +P + Sbjct: 240 YLEPEAIPVE 249 >U32305-16|AAN63464.1| 275|Caenorhabditis elegans Hypothetical protein B0336.11b protein. Length = 275 Score = 45.2 bits (102), Expect = 4e-05 Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 6/151 (3%) Query: 45 HTAILKTNKWRVEYGVADLHNNKELIEKYSDKAKVLRHRDAIGRPIIYIPAKNYNSSDRN 104 + +L+ KWR + V D + L ++ L +D R +++I Y + D Sbjct: 74 YAIMLECLKWRRNFEV-DRISLLSLKPLLDNQLMYLHGKDLQNRHMLWIMMNKYKNGDDG 132 Query: 105 IDELTKFIVYCLEVASNKCFEEVVDNLCIVFDLNNFTLSCMDYQILKNLIWLLSRHYPER 164 ++L F + + C L + D+ L M + +K +I +YP Sbjct: 133 FEKLFTFWIERHYMEYKGC-----QPLTVFIDMTGTGLKNMSFDAMKFIIHSSKYYYPNS 187 Query: 165 LGVCLIINAPTFFSGCWTVIKGWLDENTAGK 195 + LI P + W VI WL+ + A + Sbjct: 188 IESILIFENPAILNASWKVIGSWLESSAASQ 218 >U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical protein B0336.11a protein. Length = 567 Score = 45.2 bits (102), Expect = 4e-05 Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 6/151 (3%) Query: 45 HTAILKTNKWRVEYGVADLHNNKELIEKYSDKAKVLRHRDAIGRPIIYIPAKNYNSSDRN 104 + +L+ KWR + V D + L ++ L +D R +++I Y + D Sbjct: 74 YAIMLECLKWRRNFEV-DRISLLSLKPLLDNQLMYLHGKDLQNRHMLWIMMNKYKNGDDG 132 Query: 105 IDELTKFIVYCLEVASNKCFEEVVDNLCIVFDLNNFTLSCMDYQILKNLIWLLSRHYPER 164 ++L F + + C L + D+ L M + +K +I +YP Sbjct: 133 FEKLFTFWIERHYMEYKGC-----QPLTVFIDMTGTGLKNMSFDAMKFIIHSSKYYYPNS 187 Query: 165 LGVCLIINAPTFFSGCWTVIKGWLDENTAGK 195 + LI P + W VI WL+ + A + Sbjct: 188 IESILIFENPAILNASWKVIGSWLESSAASQ 218 >Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical protein T23G5.2a protein. Length = 719 Score = 42.7 bits (96), Expect = 2e-04 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%) Query: 128 VDNLCIVFDLNNFTLSCM---DYQILKNLIWLLSRHYPERLGVCLIINAPTFFSGCWTVI 184 + + +V DL+ ++ + Q L +I ++ +YPE +G L++ AP F WT+I Sbjct: 389 ISSWSLVVDLDGLSMRHLWRPGVQCLLKIIEIVEANYPETMGQVLVVRAPRVFPVLWTLI 448 Query: 185 KGWLDENTAGK 195 ++DE T K Sbjct: 449 SPFIDEKTRKK 459 >Z79753-3|CAB02088.1| 377|Caenorhabditis elegans Hypothetical protein F20G2.3 protein. Length = 377 Score = 39.9 bits (89), Expect = 0.001 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Query: 127 VVDNLCIVFDLNNFTLSCMDYQILKNLIWLLSRHYPERLGVCLIINAPTFFSGCWTVIKG 186 ++D I FD TL L + ++ HY E + +++N P F S WT+ K Sbjct: 148 IMDLTGIKFDKRTITLLTGG---LSAISAFMAEHYVELVHSFVLVNVPAFISAIWTIAKP 204 Query: 187 WLDENTAGKVTFVSSE 202 L E T K ++SE Sbjct: 205 LLPERTRNKCNILNSE 220 >Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical protein T13H5.2 protein. Length = 408 Score = 38.7 bits (86), Expect = 0.003 Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 3/73 (4%) Query: 133 IVFDLNNFTLSCMDYQILKNLIWLLSR---HYPERLGVCLIINAPTFFSGCWTVIKGWLD 189 ++FDL+ ++ +D LK + +LS+ +P+ + I+N PTF W++I L Sbjct: 172 VIFDLDGLSMVQIDLAALKVVTTMLSQLQEMFPDVIRKIFIVNTPTFIQVLWSMISPCLA 231 Query: 190 ENTAGKVTFVSSE 202 + T KV + ++ Sbjct: 232 KQTQQKVKILGND 244 >AF077545-3|AAC26304.1| 396|Caenorhabditis elegans Hypothetical protein H41C03.1 protein. Length = 396 Score = 35.9 bits (79), Expect = 0.022 Identities = 17/44 (38%), Positives = 21/44 (47%) Query: 161 YPERLGVCLIINAPTFFSGCWTVIKGWLDENTAGKVTFVSSEMD 204 YPE + +INAP+F + W I L E T KV S D Sbjct: 176 YPEWINTLFLINAPSFMTLLWKAIGPLLPERTRNKVRICSGNSD 219 >Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical protein F28H7.8 protein. Length = 410 Score = 33.9 bits (74), Expect = 0.091 Identities = 11/46 (23%), Positives = 27/46 (58%) Query: 156 LLSRHYPERLGVCLIINAPTFFSGCWTVIKGWLDENTAGKVTFVSS 201 L+ +HY E + ++IN+P++ + W+ + ++ E + ++ F S Sbjct: 185 LVGQHYREFIDKFIVINSPSYINVLWSALSPFIPEQSKQRIVFAGS 230 >Z92970-3|CAB07482.1| 383|Caenorhabditis elegans Hypothetical protein H06O01.3 protein. Length = 383 Score = 33.1 bits (72), Expect = 0.16 Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 17/121 (14%) Query: 68 ELIEKYSDKAKVLRHRDAIGRPIIYIPAKNYNSSD--RNIDELT--KFIVYCLEVASNKC 123 E +EKY + D GRPI+ N + R++ L KF + +E C Sbjct: 75 ECLEKYCGYGLL---GDTEGRPILMSLLGNVDVEGLLRSVASLDYIKFSLAAIEKGMKLC 131 Query: 124 FEEVVDN------LCIVFDLNNFT---LSCMDY-QILKNLIWLLSRHYPERLGVCLIINA 173 E+ ++ + +VFDL N T SC + L+ L HYP L LII A Sbjct: 132 EEKAKESGRPFEQMTLVFDLENITSAHFSCKQFASSFTTLVSLFQDHYPLFLRKILIIRA 191 Query: 174 P 174 P Sbjct: 192 P 192 >U58734-6|AAB52505.3| 383|Caenorhabditis elegans Hypothetical protein T27A10.7 protein. Length = 383 Score = 33.1 bits (72), Expect = 0.16 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 3/73 (4%) Query: 133 IVFDLNNFTLSCMDYQILK---NLIWLLSRHYPERLGVCLIINAPTFFSGCWTVIKGWLD 189 I+ DL+ F++ + LK +L+ +L +P+ IIN P S + ++ L Sbjct: 165 IIMDLDGFSMDLLYTPTLKVYMSLLTMLQNIFPDFARRIYIINCPAMMSAVYAMVSPVLS 224 Query: 190 ENTAGKVTFVSSE 202 T KV F+ + Sbjct: 225 SQTREKVRFLDKD 237 >U88176-2|AAO91740.3| 550|Caenorhabditis elegans Hypothetical protein F18F11.4 protein. Length = 550 Score = 32.3 bits (70), Expect = 0.28 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 3/28 (10%) Query: 157 LSRHYPERLGVCLIINAPTFFSGCWTVI 184 ++ HYP LGVCL P FF WTVI Sbjct: 183 ITHHYPHTLGVCL---QPIFFFTDWTVI 207 >Z81516-6|CAB04206.1| 524|Caenorhabditis elegans Hypothetical protein F26H9.1 protein. Length = 524 Score = 31.5 bits (68), Expect = 0.48 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 5/69 (7%) Query: 7 PVNEEDLKQLKERMNLI---ASADPAQYHNSYSLKRYLRAFHTA--ILKTNKWRVEYGVA 61 P+ E++K K+ +NL S+DPA N Y L ++ F TA L T + + + Sbjct: 280 PILREEMKLRKKTLNLFLNNGSSDPAHGVNKYFLSSLMKVFKTAHNALPTALFYLLFSPT 339 Query: 62 DLHNNKELI 70 + +++E+I Sbjct: 340 TIQDDEEVI 348 >Z75535-5|CAA99829.1| 524|Caenorhabditis elegans Hypothetical protein F26H9.1 protein. Length = 524 Score = 31.5 bits (68), Expect = 0.48 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 5/69 (7%) Query: 7 PVNEEDLKQLKERMNLI---ASADPAQYHNSYSLKRYLRAFHTA--ILKTNKWRVEYGVA 61 P+ E++K K+ +NL S+DPA N Y L ++ F TA L T + + + Sbjct: 280 PILREEMKLRKKTLNLFLNNGSSDPAHGVNKYFLSSLMKVFKTAHNALPTALFYLLFSPT 339 Query: 62 DLHNNKELI 70 + +++E+I Sbjct: 340 TIQDDEEVI 348 >AC006835-1|AAF40015.2| 903|Caenorhabditis elegans Hypothetical protein ZK993.2 protein. Length = 903 Score = 31.1 bits (67), Expect = 0.64 Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 54 WRVEYGVADLHNNKELIEKYSDKAKVLRHRDAIGRPIIYIPAKNYNSSDRNIDELTKFIV 113 W E + L N+K LI+ + +++L+ R + +P K+Y DE+ K ++ Sbjct: 415 WAYEITMKSLQNDKRLIKLFESISELLQARLMASKYFPDVPGKSYE------DEIFKRLL 468 Query: 114 YCLEVASNKCFEEVVDNLCIVFDLNN 139 Y + + + D+ I+ D ++ Sbjct: 469 YFICINKENLISDTEDHQPILIDCSH 494 >Z69793-4|CAA93675.3| 382|Caenorhabditis elegans Hypothetical protein R03A10.5 protein. Length = 382 Score = 30.7 bits (66), Expect = 0.84 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Query: 150 LKNLIWLLSRHYPERLGVCLIINAPTFFSGCWTVIKGWLDENTAGKVTFVSS---EMDLC 206 +K+L ++ HY E + + + P+F + + V++ L E T KV + D+ Sbjct: 173 MKSLADFMADHYVEMIKYFVPVCVPSFATALYVVVRPLLPEKTREKVRLIGETNWRDDVL 232 Query: 207 KYFIPDILPT 216 +Y I LP+ Sbjct: 233 QYAIHSSLPS 242 >Z46996-9|CAA87097.2| 400|Caenorhabditis elegans Hypothetical protein C34C12.6 protein. Length = 400 Score = 30.7 bits (66), Expect = 0.84 Identities = 13/51 (25%), Positives = 23/51 (45%) Query: 161 YPERLGVCLIINAPTFFSGCWTVIKGWLDENTAGKVTFVSSEMDLCKYFIP 211 +PE + + N P W V + +L E ++ +S + DL F+P Sbjct: 204 FPEMVQRIYLTNPPRLLGLLWKVARVFLSEENLKRIEIISDKSDLAGKFLP 254 >Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical protein F18A11.2 protein. Length = 388 Score = 29.9 bits (64), Expect = 1.5 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 4/71 (5%) Query: 134 VFDLNNFTLSCMDYQILKN---LIW-LLSRHYPERLGVCLIINAPTFFSGCWTVIKGWLD 189 + DL+ + S +L ++W L HYP+ L +I+NAP+F + +L Sbjct: 149 IMDLDGISFSPKLISVLTGPYRIMWGTLFDHYPQLLQKIIIVNAPSFVNVLHQACSPFLP 208 Query: 190 ENTAGKVTFVS 200 E+ K+ S Sbjct: 209 EDYKEKIVITS 219 >Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical protein T06E4.3b protein. Length = 2514 Score = 28.7 bits (61), Expect = 3.4 Identities = 11/33 (33%), Positives = 21/33 (63%) Query: 40 YLRAFHTAILKTNKWRVEYGVADLHNNKELIEK 72 ++ + +IL++N WR+ ++ + NN LIEK Sbjct: 1097 FIEQINYSILRSNIWRILTDISRIENNDILIEK 1129 >Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical protein T06E4.3a protein. Length = 2531 Score = 28.7 bits (61), Expect = 3.4 Identities = 11/33 (33%), Positives = 21/33 (63%) Query: 40 YLRAFHTAILKTNKWRVEYGVADLHNNKELIEK 72 ++ + +IL++N WR+ ++ + NN LIEK Sbjct: 1097 FIEQINYSILRSNIWRILTDISRIENNDILIEK 1129 >AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein protein. Length = 2514 Score = 28.7 bits (61), Expect = 3.4 Identities = 11/33 (33%), Positives = 21/33 (63%) Query: 40 YLRAFHTAILKTNKWRVEYGVADLHNNKELIEK 72 ++ + +IL++N WR+ ++ + NN LIEK Sbjct: 1097 FIEQINYSILRSNIWRILTDISRIENNDILIEK 1129 >AF003130-7|AAO38638.1| 247|Caenorhabditis elegans Dehydrogenases, short chain protein2, isoform b protein. Length = 247 Score = 28.3 bits (60), Expect = 4.5 Identities = 12/44 (27%), Positives = 24/44 (54%) Query: 137 LNNFTLSCMDYQILKNLIWLLSRHYPERLGVCLIINAPTFFSGC 180 LN + + Y ++ L++L+ RH+ E+L + + F +GC Sbjct: 9 LNLTVVESVFYLVVAFLLFLIGRHFIEKLQINNLSKRAVFITGC 52 >AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenases, short chain protein2, isoform c protein. Length = 343 Score = 28.3 bits (60), Expect = 4.5 Identities = 12/44 (27%), Positives = 24/44 (54%) Query: 137 LNNFTLSCMDYQILKNLIWLLSRHYPERLGVCLIINAPTFFSGC 180 LN + + Y ++ L++L+ RH+ E+L + + F +GC Sbjct: 9 LNLTVVESVFYLVVAFLLFLIGRHFIEKLQINNLSKRAVFITGC 52 >AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenases, short chain protein2, isoform a protein. Length = 368 Score = 28.3 bits (60), Expect = 4.5 Identities = 12/44 (27%), Positives = 24/44 (54%) Query: 137 LNNFTLSCMDYQILKNLIWLLSRHYPERLGVCLIINAPTFFSGC 180 LN + + Y ++ L++L+ RH+ E+L + + F +GC Sbjct: 34 LNLTVVESVFYLVVAFLLFLIGRHFIEKLQINNLSKRAVFITGC 77 >U23514-3|AAC46542.2| 421|Caenorhabditis elegans Hypothetical protein F48E8.7a protein. Length = 421 Score = 27.9 bits (59), Expect = 5.9 Identities = 13/41 (31%), Positives = 20/41 (48%) Query: 115 CLEVASNKCFEEVVDNLCIVFDLNNFTLSCMDYQILKNLIW 155 C+ + + F E+ NL + NFT + YQ N+IW Sbjct: 373 CVSDTNMELFLEMCSNLKVNRQYFNFTAKPVSYQCESNMIW 413 >U23514-2|AAM48532.1| 418|Caenorhabditis elegans Hypothetical protein F48E8.7b protein. Length = 418 Score = 27.9 bits (59), Expect = 5.9 Identities = 13/41 (31%), Positives = 20/41 (48%) Query: 115 CLEVASNKCFEEVVDNLCIVFDLNNFTLSCMDYQILKNLIW 155 C+ + + F E+ NL + NFT + YQ N+IW Sbjct: 370 CVSDTNMELFLEMCSNLKVNRQYFNFTAKPVSYQCESNMIW 410 >AC006662-3|AAF39895.1| 368|Caenorhabditis elegans Hypothetical protein H23L24.4 protein. Length = 368 Score = 27.9 bits (59), Expect = 5.9 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 9/75 (12%) Query: 117 EVASNKCFEEVVDNLC---IVFDLNNFTLSCMDYQILKNL------IWLLSRHYPERLGV 167 ++A N+ + V+DNL +V+ + LS ++++IL N+ SR ER V Sbjct: 195 DLARNENYHRVLDNLLYPLLVYLVPLLLLSVLNFRILSNISNRRVSFDHKSRFAQERRSV 254 Query: 168 CLIINAPTFFSGCWT 182 L+I+ T F C T Sbjct: 255 TLLISIVTMFFLCHT 269 Database: celegans Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 12,573,161 Number of sequences in database: 27,539 Lambda K H 0.322 0.138 0.425 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 5,797,942 Number of Sequences: 27539 Number of extensions: 250510 Number of successful extensions: 602 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 580 Number of HSP's gapped (non-prelim): 28 length of query: 218 length of database: 12,573,161 effective HSP length: 79 effective length of query: 139 effective length of database: 10,397,580 effective search space: 1445263620 effective search space used: 1445263620 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 58 (27.5 bits)
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