Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001172-TA|BGIBMGA001172-PA|IPR001206|Diacylglycerol
kinase, catalytic region, IPR002219|Protein kinase C, phorbol
ester/diacylglycerol binding
(269 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical pr... 244 5e-65
Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical pr... 163 2e-40
U49946-5|AAX55699.1| 919|Caenorhabditis elegans Diacylglycerol ... 128 3e-30
U49946-4|AAC48135.1| 952|Caenorhabditis elegans Diacylglycerol ... 128 3e-30
U49946-3|AAX55698.1| 796|Caenorhabditis elegans Diacylglycerol ... 128 3e-30
U49946-2|AAC48134.1| 950|Caenorhabditis elegans Diacylglycerol ... 128 3e-30
U49946-1|AAX55697.1| 794|Caenorhabditis elegans Diacylglycerol ... 128 3e-30
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 121 6e-28
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass... 121 6e-28
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 92 3e-19
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 92 3e-19
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 92 3e-19
U41535-11|ABD63232.1| 249|Caenorhabditis elegans Lin-26 related... 31 0.87
U41535-10|AAN84823.1| 251|Caenorhabditis elegans Lin-26 related... 31 0.87
U41535-9|AAK67250.1| 296|Caenorhabditis elegans Lin-26 related ... 31 0.87
U41535-8|AAT81202.1| 300|Caenorhabditis elegans Lin-26 related ... 31 0.87
U41535-7|AAK67249.1| 309|Caenorhabditis elegans Lin-26 related ... 31 0.87
AJ012486-1|CAA10050.1| 296|Caenorhabditis elegans LIR-1C protei... 31 0.87
AJ012485-1|CAA10049.1| 309|Caenorhabditis elegans LIR-1A protei... 31 0.87
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 29 2.6
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 29 2.6
AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila od... 29 3.5
AL132864-5|CAB63393.2| 240|Caenorhabditis elegans Hypothetical ... 28 6.1
AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical ... 28 6.1
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr... 28 8.1
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein. 28 8.1
>U23449-6|AAC24300.2| 937|Caenorhabditis elegans Hypothetical
protein K06A1.6 protein.
Length = 937
Score = 244 bits (597), Expect = 5e-65
Identities = 125/278 (44%), Positives = 169/278 (60%), Gaps = 27/278 (9%)
Query: 2 KCSACKIIAHTACIDILMDRVQFTCKPTFRDVGVRQY--REQT--VTHHHWVHRRSEKGK 57
+C+AC I+AHT C +L ++ CK TFRD ++ +E T +T HHWVH+ +G+
Sbjct: 255 RCAACHIVAHTNCFSLLA-KLNLNCKTTFRDYATKKTPSKESTDGLTAHHWVHKWRHEGR 313
Query: 58 CKACGKSLQAKLSFSSKE---IVALSCSWCKDAYHNKESCFNLQRIGEECSLGSQSNITV 114
C C KS Q K+ F KE +A++CSWCK++YH K +CF ++ E C+ G+ + V
Sbjct: 314 CNTCAKSFQQKMFFQGKEKKETIAVTCSWCKESYHLK-NCFARDKLEERCNRGALKEMIV 372
Query: 115 PPSWIVKLPRRGXXXXXXXXXXXXXXXXXXXXXXXXNELRTFVIKPIPTTNV---KPVLV 171
PP+WI++L R R FV+KP + +P+LV
Sbjct: 373 PPTWILRLANRKRSSRTPSHPRKHKKSH-----------RQFVVKPTDLWSSGPSQPLLV 421
Query: 172 FINPKSGGNQGAKLLQKFQWLLNPRQVFDLTQ-GGPGPGLELFRK-VPNLRVLACGGDGT 229
F+NPKSGGN+G+K L WLLNPRQVFD+T GP GLE+FRK V LR+L CGGDGT
Sbjct: 422 FVNPKSGGNKGSKALHTLCWLLNPRQVFDITSLKGPKFGLEMFRKVVTQLRILVCGGDGT 481
Query: 230 VGWVLSVLDRIG--SRPAVGVLPLGTGNDLARALGWGG 265
VGWVLS LD + + P + ++PLGTGNDLAR +GWGG
Sbjct: 482 VGWVLSTLDNLNWPAYPPMAIMPLGTGNDLARCMGWGG 519
>Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical
protein F54G8.2 protein.
Length = 812
Score = 163 bits (395), Expect = 2e-40
Identities = 95/268 (35%), Positives = 134/268 (50%), Gaps = 38/268 (14%)
Query: 1 MKCSACKIIAHTACIDILMDRVQFTCKPTFRDVGVRQYREQTVTHHHWVHRRSEKGKCKA 60
+ CS CK H C+ C T+ R+Q +HHW + KC
Sbjct: 295 LSCSLCKYTVHERCVR----SAATNCIRTYSS------RQQDKLYHHWQDANAT-AKCVK 343
Query: 61 CGKSLQAKLSFSSKEIVALSCSWCKDAYHNKESCFNLQRIGEECSLGSQSNITVPPSWIV 120
C ++ F K C WC + H++ C + + +EC LG+ + +PP+ I
Sbjct: 344 CKATVGV---FQGK-----GCRWCHNYVHHR--C--MSALAQECDLGALVHHILPPTHIF 391
Query: 121 KLPRRGXXXXXXXXXXXXXXXXXXXXXXXXNELRTFVIKPIPTTNVKPVLVFINPKSGGN 180
+ + + P+ + +P+LV +NPKSGG
Sbjct: 392 P------------AFLERKTSTSLKNHNFSSHSASLLQAVSPSNDCRPLLVLVNPKSGGK 439
Query: 181 QGAKLLQKFQWLLNPRQVFDLTQGGPGPGLELFRKVPNLRVLACGGDGTVGWVLSVLDRI 240
QG K+LQKF++LLNPRQV+DL++ GP PGL+LF + N +L CGGDGT+GWVL +D++
Sbjct: 440 QGVKILQKFEYLLNPRQVYDLSKTGPEPGLQLFSTLKNCNILVCGGDGTIGWVLESMDKM 499
Query: 241 ---GSRPAVGVLPLGTGNDLARALGWGG 265
RP V VLPLGTGNDLAR L WGG
Sbjct: 500 TFPHGRPPVAVLPLGTGNDLARCLRWGG 527
>U49946-5|AAX55699.1| 919|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform e protein.
Length = 919
Score = 128 bits (310), Expect = 3e-30
Identities = 60/106 (56%), Positives = 75/106 (70%), Gaps = 5/106 (4%)
Query: 165 NVKPVLVFINPKSGGNQGAKLLQKFQWLLNPRQVFDLTQGGPGPGLELFRKVPNLRVLAC 224
+V+P+LV +N KSGG QG +L+Q F+ LLNP QVFD+ GGP GL +FR +P ++LAC
Sbjct: 512 DVEPLLVLVNVKSGGCQGTELIQSFRKLLNPFQVFDVLNGGPLVGLYVFRNIPKYKILAC 571
Query: 225 GGDGTVGWVLSVLDRIGS-----RPAVGVLPLGTGNDLARALGWGG 265
GGDGT+GWVL LD P G++PLGTGNDLAR L WGG
Sbjct: 572 GGDGTIGWVLQCLDIAKQDAACFSPPCGIVPLGTGNDLARVLRWGG 617
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 14/124 (11%)
Query: 1 MKCSACKIIAHTACIDILMDRVQFTCKPTFRDVGVRQYREQTVTHHHWVHRRSEKGKCKA 60
++C C+ H C D+ + CK V + HH ++ KC
Sbjct: 110 VECEVCEYYVHVDCSDLAVS----DCKEAATYVANMESANTVQYHHMREGNLPKESKCIV 165
Query: 61 CGKSLQAKLSFSSKEIVALSCSWCKDAYHNKESCFNLQRIGEECSLGSQSNITVPPSWIV 120
C K+ FS++ + + C WC H C+ +++ +EC G I +PP +
Sbjct: 166 CRKTC-----FSTECLAGMRCEWCGQTAH--AVCY--RQMDKECDFGVLRKIMLPPMCLT 216
Query: 121 KLPR 124
+PR
Sbjct: 217 -IPR 219
>U49946-4|AAC48135.1| 952|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform b protein.
Length = 952
Score = 128 bits (310), Expect = 3e-30
Identities = 60/106 (56%), Positives = 75/106 (70%), Gaps = 5/106 (4%)
Query: 165 NVKPVLVFINPKSGGNQGAKLLQKFQWLLNPRQVFDLTQGGPGPGLELFRKVPNLRVLAC 224
+V+P+LV +N KSGG QG +L+Q F+ LLNP QVFD+ GGP GL +FR +P ++LAC
Sbjct: 545 DVEPLLVLVNVKSGGCQGTELIQSFRKLLNPFQVFDVLNGGPLVGLYVFRNIPKYKILAC 604
Query: 225 GGDGTVGWVLSVLDRIGS-----RPAVGVLPLGTGNDLARALGWGG 265
GGDGT+GWVL LD P G++PLGTGNDLAR L WGG
Sbjct: 605 GGDGTIGWVLQCLDIAKQDAACFSPPCGIVPLGTGNDLARVLRWGG 650
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 14/124 (11%)
Query: 1 MKCSACKIIAHTACIDILMDRVQFTCKPTFRDVGVRQYREQTVTHHHWVHRRSEKGKCKA 60
++C C+ H C D+ + CK V + HH ++ KC
Sbjct: 110 VECEVCEYYVHVDCSDLAVS----DCKEAATYVANMESANTVQYHHMREGNLPKESKCIV 165
Query: 61 CGKSLQAKLSFSSKEIVALSCSWCKDAYHNKESCFNLQRIGEECSLGSQSNITVPPSWIV 120
C K+ FS++ + + C WC H C+ +++ +EC G I +PP +
Sbjct: 166 CRKTC-----FSTECLAGMRCEWCGQTAH--AVCY--RQMDKECDFGVLRKIMLPPMCLT 216
Query: 121 KLPR 124
+PR
Sbjct: 217 -IPR 219
>U49946-3|AAX55698.1| 796|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform d protein.
Length = 796
Score = 128 bits (310), Expect = 3e-30
Identities = 60/106 (56%), Positives = 75/106 (70%), Gaps = 5/106 (4%)
Query: 165 NVKPVLVFINPKSGGNQGAKLLQKFQWLLNPRQVFDLTQGGPGPGLELFRKVPNLRVLAC 224
+V+P+LV +N KSGG QG +L+Q F+ LLNP QVFD+ GGP GL +FR +P ++LAC
Sbjct: 389 DVEPLLVLVNVKSGGCQGTELIQSFRKLLNPFQVFDVLNGGPLVGLYVFRNIPKYKILAC 448
Query: 225 GGDGTVGWVLSVLDRIGS-----RPAVGVLPLGTGNDLARALGWGG 265
GGDGT+GWVL LD P G++PLGTGNDLAR L WGG
Sbjct: 449 GGDGTIGWVLQCLDIAKQDAACFSPPCGIVPLGTGNDLARVLRWGG 494
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 14/124 (11%)
Query: 1 MKCSACKIIAHTACIDILMDRVQFTCKPTFRDVGVRQYREQTVTHHHWVHRRSEKGKCKA 60
++C C+ H C D+ + CK V + HH ++ KC
Sbjct: 110 VECEVCEYYVHVDCSDLAVS----DCKEAATYVANMESANTVQYHHMREGNLPKESKCIV 165
Query: 61 CGKSLQAKLSFSSKEIVALSCSWCKDAYHNKESCFNLQRIGEECSLGSQSNITVPPSWIV 120
C K+ FS++ + + C WC H C+ +++ +EC G I +PP +
Sbjct: 166 CRKTC-----FSTECLAGMRCEWCGQTAH--AVCY--RQMDKECDFGVLRKIMLPPMCLT 216
Query: 121 KLPR 124
+PR
Sbjct: 217 -IPR 219
>U49946-2|AAC48134.1| 950|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform a protein.
Length = 950
Score = 128 bits (310), Expect = 3e-30
Identities = 60/106 (56%), Positives = 75/106 (70%), Gaps = 5/106 (4%)
Query: 165 NVKPVLVFINPKSGGNQGAKLLQKFQWLLNPRQVFDLTQGGPGPGLELFRKVPNLRVLAC 224
+V+P+LV +N KSGG QG +L+Q F+ LLNP QVFD+ GGP GL +FR +P ++LAC
Sbjct: 543 DVEPLLVLVNVKSGGCQGTELIQSFRKLLNPFQVFDVLNGGPLVGLYVFRNIPKYKILAC 602
Query: 225 GGDGTVGWVLSVLDRIGS-----RPAVGVLPLGTGNDLARALGWGG 265
GGDGT+GWVL LD P G++PLGTGNDLAR L WGG
Sbjct: 603 GGDGTIGWVLQCLDIAKQDAACFSPPCGIVPLGTGNDLARVLRWGG 648
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 14/124 (11%)
Query: 1 MKCSACKIIAHTACIDILMDRVQFTCKPTFRDVGVRQYREQTVTHHHWVHRRSEKGKCKA 60
++C C+ H C D+ + CK V + HH ++ KC
Sbjct: 110 VECEVCEYYVHVDCSDLAVS----DCKEAATYVANMESANTVQYHHMREGNLPKESKCIV 165
Query: 61 CGKSLQAKLSFSSKEIVALSCSWCKDAYHNKESCFNLQRIGEECSLGSQSNITVPPSWIV 120
C K+ FS++ + + C WC H C+ +++ +EC G I +PP +
Sbjct: 166 CRKTC-----FSTECLAGMRCEWCGQTAH--AVCY--RQMDKECDFGVLRKIMLPPMCLT 216
Query: 121 KLPR 124
+PR
Sbjct: 217 -IPR 219
>U49946-1|AAX55697.1| 794|Caenorhabditis elegans Diacylglycerol
kinase protein 1,isoform c protein.
Length = 794
Score = 128 bits (310), Expect = 3e-30
Identities = 60/106 (56%), Positives = 75/106 (70%), Gaps = 5/106 (4%)
Query: 165 NVKPVLVFINPKSGGNQGAKLLQKFQWLLNPRQVFDLTQGGPGPGLELFRKVPNLRVLAC 224
+V+P+LV +N KSGG QG +L+Q F+ LLNP QVFD+ GGP GL +FR +P ++LAC
Sbjct: 387 DVEPLLVLVNVKSGGCQGTELIQSFRKLLNPFQVFDVLNGGPLVGLYVFRNIPKYKILAC 446
Query: 225 GGDGTVGWVLSVLDRIGS-----RPAVGVLPLGTGNDLARALGWGG 265
GGDGT+GWVL LD P G++PLGTGNDLAR L WGG
Sbjct: 447 GGDGTIGWVLQCLDIAKQDAACFSPPCGIVPLGTGNDLARVLRWGG 492
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 14/124 (11%)
Query: 1 MKCSACKIIAHTACIDILMDRVQFTCKPTFRDVGVRQYREQTVTHHHWVHRRSEKGKCKA 60
++C C+ H C D+ + CK V + HH ++ KC
Sbjct: 110 VECEVCEYYVHVDCSDLAVS----DCKEAATYVANMESANTVQYHHMREGNLPKESKCIV 165
Query: 61 CGKSLQAKLSFSSKEIVALSCSWCKDAYHNKESCFNLQRIGEECSLGSQSNITVPPSWIV 120
C K+ FS++ + + C WC H C+ +++ +EC G I +PP +
Sbjct: 166 CRKTC-----FSTECLAGMRCEWCGQTAH--AVCY--RQMDKECDFGVLRKIMLPPMCLT 216
Query: 121 KLPR 124
+PR
Sbjct: 217 -IPR 219
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform b protein.
Length = 1321
Score = 121 bits (291), Expect = 6e-28
Identities = 56/101 (55%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
Query: 168 PVLVFINPKSGGNQGAKLLQKFQWLLNPRQVFDLTQGGPGPGLELFRKVPNLRVLACGGD 227
P++V IN KSG +QG ++++KF+ +LNP QVFD+ GP L F + + RVL CGGD
Sbjct: 244 PLIVLINAKSGDSQGQRIIKKFRRILNPIQVFDIIATGPDFALTFFSHLESFRVLVCGGD 303
Query: 228 GTVGWVLSVLDRIG--SRPAVGVLPLGTGNDLARALGWGGA 266
GTVGWVLS DR+ S+ + +LPLGTGNDLAR LGWG A
Sbjct: 304 GTVGWVLSAFDRLNLHSKCQLAILPLGTGNDLARVLGWGHA 344
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 3 CSACKIIAHTACIDILMDRVQFTCKPTFRDVGVRQYREQTVTHHHWVH-RRSEKGKCKAC 61
C CK+ AH C D L ++ ++T + + E ++ H W+ KC C
Sbjct: 82 CDICKVKAHRKCRDNLTEQCKWTNQSSIPQHLQFISPENSILPHQWMEGNLPMPSKCSVC 141
Query: 62 GK 63
K
Sbjct: 142 EK 143
>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform a protein.
Length = 1372
Score = 121 bits (291), Expect = 6e-28
Identities = 56/101 (55%), Positives = 72/101 (71%), Gaps = 2/101 (1%)
Query: 168 PVLVFINPKSGGNQGAKLLQKFQWLLNPRQVFDLTQGGPGPGLELFRKVPNLRVLACGGD 227
P++V IN KSG +QG ++++KF+ +LNP QVFD+ GP L F + + RVL CGGD
Sbjct: 244 PLIVLINAKSGDSQGQRIIKKFRRILNPIQVFDIIATGPDFALTFFSHLESFRVLVCGGD 303
Query: 228 GTVGWVLSVLDRIG--SRPAVGVLPLGTGNDLARALGWGGA 266
GTVGWVLS DR+ S+ + +LPLGTGNDLAR LGWG A
Sbjct: 304 GTVGWVLSAFDRLNLHSKCQLAILPLGTGNDLARVLGWGHA 344
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 3 CSACKIIAHTACIDILMDRVQFTCKPTFRDVGVRQYREQTVTHHHWVH-RRSEKGKCKAC 61
C CK+ AH C D L ++ ++T + + E ++ H W+ KC C
Sbjct: 82 CDICKVKAHRKCRDNLTEQCKWTNQSSIPQHLQFISPENSILPHQWMEGNLPMPSKCSVC 141
Query: 62 GK 63
K
Sbjct: 142 EK 143
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 160 PIPTTNVKPVLVFINPKSGGNQGAKLLQKFQWLLNPRQVFDLTQGGPGPGLELFRKVPNL 219
P+ +P++V +NPKSG G +LL+ F+ L+P QV D+ + L + PN+
Sbjct: 10 PVDIEKWRPIMVIVNPKSGSGAGKQLLRNFRAHLHPAQVVDVLKSNIAASLRWIDEHPNV 69
Query: 220 --RVLACGGDGTVGWVLSVLDRIGSRPAVGVLPLGTGNDLARALGWGGATD 268
R+L GGDGT+ L +D + R V VLPLGTGNDL+R L WG D
Sbjct: 70 DVRILIAGGDGTICSALDQIDTLSRRIPVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 160 PIPTTNVKPVLVFINPKSGGNQGAKLLQKFQWLLNPRQVFDLTQGGPGPGLELFRKVPNL 219
P+ +P++V +NPKSG G +LL+ F+ L+P QV D+ + L + PN+
Sbjct: 10 PVDIEKWRPIMVIVNPKSGSGAGKQLLRNFRAHLHPAQVVDVLKSNIAASLRWIDEHPNV 69
Query: 220 --RVLACGGDGTVGWVLSVLDRIGSRPAVGVLPLGTGNDLARALGWGGATD 268
R+L GGDGT+ L +D + R V VLPLGTGNDL+R L WG D
Sbjct: 70 DVRILIAGGDGTICSALDQIDTLSRRIPVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 160 PIPTTNVKPVLVFINPKSGGNQGAKLLQKFQWLLNPRQVFDLTQGGPGPGLELFRKVPNL 219
P+ +P++V +NPKSG G +LL+ F+ L+P QV D+ + L + PN+
Sbjct: 195 PVDIEKWRPIMVIVNPKSGSGAGKQLLRNFRAHLHPAQVVDVLKSNIAASLRWIDEHPNV 254
Query: 220 --RVLACGGDGTVGWVLSVLDRIGSRPAVGVLPLGTGNDLARALGWGGATD 268
R+L GGDGT+ L +D + R V VLPLGTGNDL+R L WG D
Sbjct: 255 DVRILIAGGDGTICSALDQIDTLSRRIPVAVLPLGTGNDLSRLLKWGKKCD 305
>U41535-11|ABD63232.1| 249|Caenorhabditis elegans Lin-26 related
protein 1, isoform e protein.
Length = 249
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 20 DRVQFTCKPTFRDVGVRQYREQTVTHHHWVHRRSEK-GKCKACGKS 64
D ++ TCK DV R + H W+ +S K +C CG S
Sbjct: 120 DSIKATCKVCGHDVMYSPQRTWNLMRHVWIMHQSSKPNQCSICGYS 165
>U41535-10|AAN84823.1| 251|Caenorhabditis elegans Lin-26 related
protein 1, isoform c protein.
Length = 251
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 20 DRVQFTCKPTFRDVGVRQYREQTVTHHHWVHRRSEK-GKCKACGKS 64
D ++ TCK DV R + H W+ +S K +C CG S
Sbjct: 180 DSIKATCKVCGHDVMYSPQRTWNLMRHVWIMHQSSKPNQCSICGYS 225
>U41535-9|AAK67250.1| 296|Caenorhabditis elegans Lin-26 related
protein 1, isoform a protein.
Length = 296
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 20 DRVQFTCKPTFRDVGVRQYREQTVTHHHWVHRRSEK-GKCKACGKS 64
D ++ TCK DV R + H W+ +S K +C CG S
Sbjct: 180 DSIKATCKVCGHDVMYSPQRTWNLMRHVWIMHQSSKPNQCSICGYS 225
>U41535-8|AAT81202.1| 300|Caenorhabditis elegans Lin-26 related
protein 1, isoform d protein.
Length = 300
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 20 DRVQFTCKPTFRDVGVRQYREQTVTHHHWVHRRSEK-GKCKACGKS 64
D ++ TCK DV R + H W+ +S K +C CG S
Sbjct: 180 DSIKATCKVCGHDVMYSPQRTWNLMRHVWIMHQSSKPNQCSICGYS 225
>U41535-7|AAK67249.1| 309|Caenorhabditis elegans Lin-26 related
protein 1, isoform b protein.
Length = 309
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 20 DRVQFTCKPTFRDVGVRQYREQTVTHHHWVHRRSEK-GKCKACGKS 64
D ++ TCK DV R + H W+ +S K +C CG S
Sbjct: 180 DSIKATCKVCGHDVMYSPQRTWNLMRHVWIMHQSSKPNQCSICGYS 225
>AJ012486-1|CAA10050.1| 296|Caenorhabditis elegans LIR-1C protein
protein.
Length = 296
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 20 DRVQFTCKPTFRDVGVRQYREQTVTHHHWVHRRSEK-GKCKACGKS 64
D ++ TCK DV R + H W+ +S K +C CG S
Sbjct: 180 DSIKATCKVCGHDVMYSPQRTWNLMRHVWIMHQSSKPNQCSICGYS 225
>AJ012485-1|CAA10049.1| 309|Caenorhabditis elegans LIR-1A protein
protein.
Length = 309
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 20 DRVQFTCKPTFRDVGVRQYREQTVTHHHWVHRRSEK-GKCKACGKS 64
D ++ TCK DV R + H W+ +S K +C CG S
Sbjct: 180 DSIKATCKVCGHDVMYSPQRTWNLMRHVWIMHQSSKPNQCSICGYS 225
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 46 HHWVHRRSEKGKCKACGKSLQAKLSFSSKEIV-----ALSCSWCKDAYHNK 91
H VH ++ +CK CGK+ + + S+ ++ C +C +H K
Sbjct: 144 HQQVHVSDKQFECKQCGKTFKRSSTLSTHLLIHSDTRPYPCEYCGKRFHQK 194
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 46 HHWVHRRSEKGKCKACGKSLQAKLSFSSKEIV-----ALSCSWCKDAYHNK 91
H VH ++ +CK CGK+ + + S+ ++ C +C +H K
Sbjct: 144 HQQVHVSDKQFECKQCGKTFKRSSTLSTHLLIHSDTRPYPCEYCGKRFHQK 194
>AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila
odd-skipped-like protein2 protein.
Length = 254
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 17 ILMDRVQFTCKPTFRDVGVRQYREQT-VTHHHWVHRRSEKGKCKACGK 63
++ +R +P DV + +R Q + H ++H++ KC+ CGK
Sbjct: 140 LIHERTHTDERPYSCDVCGKAFRRQDHLRDHKYIHQKDRPFKCEICGK 187
>AL132864-5|CAB63393.2| 240|Caenorhabditis elegans Hypothetical
protein Y53H1A.2 protein.
Length = 240
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 40 EQTVTHHHWVHRRSEKGKCKACGKSLQA 67
E+ + HH VHR + KC+ CG Q+
Sbjct: 181 ERRLKHHIVVHRNPDAYKCQKCGYCYQS 208
>AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical
protein Y38H8A.5 protein.
Length = 218
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 39 REQTVTHHHWVHRRSEKGKCKACGKSLQAKLSFSSKEIV-----ALSCSWCKDAYH 89
R T+ H +H+ + C+ CGK ++ + + SCS C A+H
Sbjct: 119 RSSTLNTHVRIHQGFKPFVCEICGKGFHQNGNYKNHRLTHEDTKKFSCSICSRAFH 174
>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical
protein K04B12.1 protein.
Length = 1764
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 24 FTCKPTFRDVGVRQYREQTVTHHHW-VHRRSEKGKCKACGKSLQAKLSFSSKEIVALSCS 82
FT TF + + ++ H++ V+ S G C +C S S + SC
Sbjct: 547 FTSPNTFEILLLTSISNNPISRHNFTVYDCSGYGTCSSCMSSEYNCAWCSGLHKCSNSCG 606
Query: 83 WCKDAYHNKESCFNLQRIGEECSLGSQSNITVPPSWIVKLPRR 125
A ++C +Q + ++GSQ I + S + L RR
Sbjct: 607 ----ALEKSKACVKIQPMRLPIAIGSQQEIVLEASNLDTLDRR 645
>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
Length = 1766
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 24 FTCKPTFRDVGVRQYREQTVTHHHW-VHRRSEKGKCKACGKSLQAKLSFSSKEIVALSCS 82
FT TF + + ++ H++ V+ S G C +C S S + SC
Sbjct: 549 FTSPNTFEILLLTSISNNPISRHNFTVYDCSGYGTCSSCMSSEYNCAWCSGLHKCSNSCG 608
Query: 83 WCKDAYHNKESCFNLQRIGEECSLGSQSNITVPPSWIVKLPRR 125
A ++C +Q + ++GSQ I + S + L RR
Sbjct: 609 ----ALEKSKACVKIQPMRLPIAIGSQQEIVLEASNLDTLDRR 647
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.138 0.447
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,527,537
Number of Sequences: 27539
Number of extensions: 263896
Number of successful extensions: 690
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 647
Number of HSP's gapped (non-prelim): 39
length of query: 269
length of database: 12,573,161
effective HSP length: 80
effective length of query: 189
effective length of database: 10,370,041
effective search space: 1959937749
effective search space used: 1959937749
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -