GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001172-TA|BGIBMGA001172-PA|IPR001206|Diacylglycerol
kinase, catalytic region, IPR002219|Protein kinase C, phorbol
ester/diacylglycerol binding
         (269 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    24   1.6  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 43  VTHHHWVHRRSEKGKCKACGKSLQAKLSFS 72
           +T H+  H   +  +C+ C KS   K + S
Sbjct: 107 LTRHYRTHTGEKPYQCEYCSKSFSVKENLS 136



 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/19 (47%), Positives = 12/19 (63%), Gaps = 4/19 (21%)

Query: 49  VHRRSEKGK----CKACGK 63
           +H R+  G+    CKACGK
Sbjct: 193 IHMRTHTGEKPYVCKACGK 211


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.138    0.447 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,260
Number of Sequences: 429
Number of extensions: 3240
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 2
length of query: 269
length of database: 140,377
effective HSP length: 57
effective length of query: 212
effective length of database: 115,924
effective search space: 24575888
effective search space used: 24575888
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)