Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001171-TA|BGIBMGA001171-PA|undefined
(227 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57640| Best HMM Match : DUF632 (HMM E-Value=2.8) 30 1.4
SB_45941| Best HMM Match : DUF632 (HMM E-Value=2.8) 30 1.4
SB_46125| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_51534| Best HMM Match : 7tm_1 (HMM E-Value=0) 30 1.8
SB_40403| Best HMM Match : Vicilin_N (HMM E-Value=0.012) 29 2.4
SB_1336| Best HMM Match : zf-C2H2 (HMM E-Value=2.9e-16) 29 2.4
SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 29 3.2
SB_6580| Best HMM Match : SAC3_GANP (HMM E-Value=2.1) 28 7.3
>SB_57640| Best HMM Match : DUF632 (HMM E-Value=2.8)
Length = 560
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 74 PPSDEPPILPQRRRSISRQEAFFVEPT-GSSLENVRASEEGVASAARDSLVH--DIYLAV 130
P S EPP P R S R +F EP E VRA G+ + R ++H +++LA
Sbjct: 136 PESVEPPQSPVRTWSYCRAFSFNREPVFVLPSEEVRA---GLQANLRLFILHSAEVFLA- 191
Query: 131 PELKRDRAASVDSC 144
PE RD VD C
Sbjct: 192 PEDSRDLEKQVDVC 205
>SB_45941| Best HMM Match : DUF632 (HMM E-Value=2.8)
Length = 688
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 74 PPSDEPPILPQRRRSISRQEAFFVEPT-GSSLENVRASEEGVASAARDSLVH--DIYLAV 130
P S EPP P R S R +F EP E VRA G+ + R ++H +++LA
Sbjct: 180 PESVEPPQSPVRTWSYCRAFSFNREPVFVLPSEEVRA---GLQANLRLFILHSAEVFLA- 235
Query: 131 PELKRDRAASVDSC 144
PE RD VD C
Sbjct: 236 PEDSRDLEKQVDVC 249
>SB_46125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1564
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 105 ENVRASEEGVASAARDSLVHDIYLAVPELKRDRAASVDSCFSKVSGGARAE--QLNGSAN 162
EN RAS A +L H + + L R +DS S GA +E L
Sbjct: 1318 ENFRASASKHAPIINKALRHTLTMLSQSLSRRGRHQLDSPGDASSEGATSEVSLLKAKTK 1377
Query: 163 SLTVPGTGLRSRSVDIVLPTAEQSRYKALAL 193
S PG R R+ ++ TAE +R +A +L
Sbjct: 1378 SPDSPGRSRRVRN-NVGQQTAESTRPRAASL 1407
>SB_51534| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 795
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 75 PSDEPPILPQRRRSISRQEAFFV-EPTGSSLENVRASEEG 113
P++ +LP R+ S QE + E GSSLE V EEG
Sbjct: 404 PAESLEVLPMRQDPTSTQEHHLMDEKAGSSLERVDLLEEG 443
>SB_40403| Best HMM Match : Vicilin_N (HMM E-Value=0.012)
Length = 1119
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 125 DIYLAVPELKRDRAASVDSCFSKVSGGARAEQLNGSANSLTVPGTGLRSRSVDIVLPTAE 184
++ ++V + A+ +D+ FSK+S + ++NG N+ L R PT +
Sbjct: 251 EVIVSVAKTSESSASELDTLFSKLSSEEESSEMNGLNNN-----ESLAHRKGPSPPPTGD 305
Query: 185 QSRYK 189
Q YK
Sbjct: 306 QDSYK 310
>SB_1336| Best HMM Match : zf-C2H2 (HMM E-Value=2.9e-16)
Length = 298
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 84 QRRRSISRQEAFFVEPTGSSLENVRASEEGVASAARDSLVHDIYLAVPELKRDRAASVDS 143
Q + +A VE T + E V AS ++ +++V I AV A V +
Sbjct: 94 QTENMVPSSQALDVEMTTVTAEQVAASRATESTQTDENIV--ILPAVAIKTEGNVAKVVA 151
Query: 144 CFSKVSGGARAEQLNGSANSLTVPGTGLRSRSV 176
+K+ + +N AN+ +V G G+ S V
Sbjct: 152 SPAKMKALESSSAINAKANTNSVKGAGVNSSGV 184
>SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 641
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 87 RSISRQEAFFVEPTGSSLENVRASEEGVASAARDSLVHDIYLAVPELKRDRAASV-DSCF 145
+ +SR ++ F+ +E +E + S+ H L+V E+ R RA +V DSC
Sbjct: 309 QQLSRNDSGFLSLLAEEVEEETGNESDGDDGSTSSVAHK-QLSVEEVVRKRAGNVVDSCM 367
Query: 146 SKVS 149
S +S
Sbjct: 368 SIMS 371
>SB_6580| Best HMM Match : SAC3_GANP (HMM E-Value=2.1)
Length = 1187
Score = 27.9 bits (59), Expect = 7.3
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 94 AFFVEPTGSSLENVRASEEGVASAARDSL--VHDIYLAVPELKRDRAASVDSCFSKVSGG 151
+F + S E AS G+ A D+L V D Y L+ R + CFS +
Sbjct: 667 SFISRKSDSQAEVCGASFAGMKQAVDDALIGVDDSYDGSSSLRHQRELVMSCCFSNIKVR 726
Query: 152 ARAEQLNGSANSLTV 166
A + L+ A + V
Sbjct: 727 AGSSLLSSVAERVAV 741
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.129 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,661,410
Number of Sequences: 59808
Number of extensions: 138245
Number of successful extensions: 308
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 308
Number of HSP's gapped (non-prelim): 8
length of query: 227
length of database: 16,821,457
effective HSP length: 80
effective length of query: 147
effective length of database: 12,036,817
effective search space: 1769412099
effective search space used: 1769412099
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 58 (27.5 bits)
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