Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001170-TA|BGIBMGA001170-PA|undefined
(115 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0755 - 6343084-6345172,6345526-6346367 30 0.52
10_08_0059 + 14529885-14530991 29 0.68
04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376 29 0.68
02_01_0570 - 4195409-4195443,4196245-4196333,4196539-4196630,419... 29 1.2
11_01_0024 + 163588-163897,164303-164406 27 2.8
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 27 2.8
09_06_0010 - 20193577-20193921,20194014-20194160,20194239-201944... 27 2.8
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166 27 2.8
08_01_0351 + 3095639-3095995,3096134-3096187,3096407-3096490,309... 27 3.6
07_01_0827 - 6664723-6665346,6666636-6667559 27 3.6
12_01_0062 + 530180-532398,533123-533213,533398-533613 27 4.8
11_01_0274 - 2050667-2052115 27 4.8
11_01_0060 + 453615-454030,454086-455862 27 4.8
03_04_0211 + 18661949-18662470 27 4.8
01_06_1050 + 34125087-34126001,34126082-34126639 27 4.8
05_06_0288 + 26954222-26954446,26954995-26955124,26955221-269554... 26 6.4
04_03_0443 + 15999984-16000895,16002402-16003025 26 6.4
02_04_0440 + 22954950-22955213,22955317-22956621,22956791-22957522 26 6.4
02_01_0189 - 1273313-1274157,1274595-1275549 26 6.4
06_01_0258 - 1913408-1913506,1913593-1913631,1913720-1913859,191... 26 8.4
>11_01_0755 - 6343084-6345172,6345526-6346367
Length = 976
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 27 PQSPRILADKSTSLTVVPQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVSTHRR 86
P P++L K T A AA+ P T C + H + + ++ SV T +
Sbjct: 910 PNRPKVLFRKRVDPTDAQSTAKYAATERPVPETGCPAVIKKRKFHAIQSYYNESVETKKS 969
Query: 87 LR 88
LR
Sbjct: 970 LR 971
>10_08_0059 + 14529885-14530991
Length = 368
Score = 29.5 bits (63), Expect = 0.68
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 8 MYKASADDVQGTAHQELRLPQSPRILADKSTSLTV-VPQQASIAASTGPSQPTHCASWSY 66
MY S +GT +E + Q+ + AD+ + T+ + + + G S +++
Sbjct: 261 MYTDSLPPEKGTTREEAAMAQNMIVAADRYSMETLKLMCEDRLRKHIGASSVATMLTFAD 320
Query: 67 GTHLHCLIAQHSSSVSTHRRLRAALAT 93
H H L A + +S+ L+AA+AT
Sbjct: 321 RHHCHGLRAACTEFLSSPTNLKAAMAT 347
>04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376
Length = 1135
Score = 29.5 bits (63), Expect = 0.68
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 21 HQELRLPQSPRILADKSTSLTVVPQQASIA-ASTGPSQPTHCASW 64
H E R + LAD T P+ SI AST PSQ H A W
Sbjct: 1024 HFEPRHAIKSQALADFVAEWTPAPETVSIPEASTDPSQLPHTAHW 1068
>02_01_0570 -
4195409-4195443,4196245-4196333,4196539-4196630,
4196726-4196833,4196984-4197118,4197211-4197256,
4197358-4197458,4198285-4198422,4198503-4198601,
4198740-4198856,4199195-4199356,4199734-4199793,
4200371-4200538,4200608-4200718,4201401-4201499,
4201579-4201644,4202407-4202490,4202563-4202605,
4202684-4202739,4202817-4202925,4203442-4203524,
4203842-4203925,4204311-4204382,4204462-4204539,
4204633-4204716,4204806-4204876,4205943-4206012,
4206495-4206626,4207168-4207284,4208185-4208367
Length = 963
Score = 28.7 bits (61), Expect = 1.2
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 32 ILADKSTSLTVVPQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVS-------TH 84
I +DK+ +LT+ Q S TG PT A S+G LH A+ S S
Sbjct: 410 ICSDKTGTLTL-NQDGSPIEITG--SPTEKAILSWGVELHMKFAEEKSKSSIIHVSPFNS 466
Query: 85 RRLRAALATITQHSSSVSTHRKLRAALALA 114
+ RA +A I S + H K A + LA
Sbjct: 467 EKKRAGVAVIVD-DSDIHVHWKGAAEIVLA 495
>11_01_0024 + 163588-163897,164303-164406
Length = 137
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Query: 37 STSLTVVPQQA---SIAASTGPSQPTHCASWSYGTH 69
ST T P A ++A ST P+ PTH WS TH
Sbjct: 66 STHATTTPPPAGTMTVAPST-PNAPTHHGRWSRQTH 100
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 21 HQELRLPQSPRILADKSTSLTVVPQQASIA-ASTGPSQPTHCASW 64
H E R + LA+ T P+ SI AST PSQ H A W
Sbjct: 1267 HFEPRHAIKSQALANFVVEWTPAPEPVSIPEASTDPSQLPHTAHW 1311
>09_06_0010 -
20193577-20193921,20194014-20194160,20194239-20194495,
20194619-20194826
Length = 318
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Query: 11 ASADDVQGTAHQELRLPQSPRILADKSTSLTVVPQQASIAASTGPSQPTHCASWSYGTHL 70
AS + G H + R P P ++ + P + + P ASW L
Sbjct: 224 ASHNKASGNGHAKPRAPHLPPPVSQRRQFQAPPPAAPTTTKTAAAPAPPPTASWESFDLL 283
Query: 71 HCLIAQHSSSVSTHRRLRAALATIT 95
+ + SS+V+T + AA T T
Sbjct: 284 SSMPSTSSSTVTT--TMAAATTTTT 306
>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
Length = 545
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 18 GTAHQELRLPQSPRILADKSTSLTVVP 44
G H++L + ++P ++A K TSL V P
Sbjct: 510 GMLHKDLDMREAPGLIAAKHTSLNVCP 536
>08_01_0351 +
3095639-3095995,3096134-3096187,3096407-3096490,
3096972-3097097,3097174-3097241,3097324-3097393,
3097597-3097662,3098404-3098454
Length = 291
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 37 STSLTVVPQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALATITQ 96
S + T VP+ ++ AST P H S S + A +++V R+ R L TQ
Sbjct: 47 SAATTRVPRALALTASTCPWHRRHLCSSSSSSSSAAAAAATAAAVEEARQGRKQLGATTQ 106
>07_01_0827 - 6664723-6665346,6666636-6667559
Length = 515
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 18 GTAHQELRLPQSPRILADKSTSLTVVP 44
G H +L + ++P ++A K TSL V P
Sbjct: 480 GMLHNDLDMREAPGLIAAKHTSLNVCP 506
>12_01_0062 + 530180-532398,533123-533213,533398-533613
Length = 841
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 62 ASWSYGTHLHCLI--AQHSSSVSTHRRLRAALATITQHSSSVSTHRKLR 108
A W G LHCL+ + S+ S L Q ++ S RK+R
Sbjct: 208 AQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIR 256
>11_01_0274 - 2050667-2052115
Length = 482
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 55 PSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLRAAL 111
PS PTH +YG H AQ+ + + + T++ H+S+ HR++ ++L
Sbjct: 15 PSAPTHFLIVAYGIQSHINPAQNLAHRLASIDASSVMCTLSIHASA---HRRMFSSL 68
>11_01_0060 + 453615-454030,454086-455862
Length = 730
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 62 ASWSYGTHLHCLI--AQHSSSVSTHRRLRAALATITQHSSSVSTHRKLR 108
A W G LHCL+ + S+ S L Q ++ S RK+R
Sbjct: 192 AQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIR 240
>03_04_0211 + 18661949-18662470
Length = 173
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 55 PSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVS 102
PSQP HC S S L + + + + RRLR + H+ VS
Sbjct: 25 PSQPLHCPSSSSPFVLDVDVPSVARHIVSRRRLRRRIRNGVFHAVLVS 72
>01_06_1050 + 34125087-34126001,34126082-34126639
Length = 490
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 75 AQHSSSVSTHRRLRAALATITQHSSSVSTHRKLRAALALA 114
A+ + RR+R ALATI ++ + R+ R A LA
Sbjct: 244 AKRLLDLEPERRMREALATIHGYADRIVRERRERGAAGLA 283
>05_06_0288 +
26954222-26954446,26954995-26955124,26955221-26955414,
26955638-26956273
Length = 394
Score = 26.2 bits (55), Expect = 6.4
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 3 KRVIMMYKASADDVQGTAHQELRLPQSPRILADKSTSLTVVPQQASIAASTGPSQPTHCA 62
KRV +++ + D T Q+LR + + D T VVP AA+ G PTH
Sbjct: 313 KRVRGIFENTPSDSIDT--QDLRPSKGRPPVTD--TGDVVVPVLMGAAAAAGNPFPTHTM 368
Query: 63 SWSY 66
W++
Sbjct: 369 DWAF 372
>04_03_0443 + 15999984-16000895,16002402-16003025
Length = 511
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 18 GTAHQELRLPQSPRILADKSTSLTVVP 44
G H++L + ++P +L K TSL V P
Sbjct: 476 GMLHKDLDMREAPGLLVYKHTSLNVCP 502
>02_04_0440 +
22954950-22955213,22955317-22956621,22956791-22957522
Length = 766
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 23 ELRLPQSPRILADKSTSLTVVPQQASIAASTGPS 56
E P SP +DK ++ PQQ+ + PS
Sbjct: 31 ETSTPSSPSTTSDKEDNVEFTPQQSPLPCLVSPS 64
>02_01_0189 - 1273313-1274157,1274595-1275549
Length = 599
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 42 VVPQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALA 92
VV Q+ A ++ P+ P HCAS GT C + ++ RAA A
Sbjct: 20 VVVQRLLAAGASPPADPVHCAS---GT-ARCTVTNAYAAFPDRSTCRAAAA 66
>06_01_0258 -
1913408-1913506,1913593-1913631,1913720-1913859,
1914148-1914154,1914270-1914440,1914541-1914712,
1915367-1915741,1915892-1915910,1916508-1916581,
1916744-1916937
Length = 429
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 24 LRLPQSP--RILADKSTS----LTVVPQQASIAASTGPSQPTHCASWSYGTHLHCLIAQH 77
+R P SP R+L + S++ L ++ + ++ P +P + W G LH + H
Sbjct: 24 VRRPPSPAARLLPESSSTTAGALDLLRYGRNFRRASPPPRPPQRSFWEIGDRLHIVFRVH 83
Query: 78 SSSV 81
+S +
Sbjct: 84 ASKL 87
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.121 0.342
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,062,219
Number of Sequences: 37544
Number of extensions: 104226
Number of successful extensions: 349
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 341
Number of HSP's gapped (non-prelim): 20
length of query: 115
length of database: 14,793,348
effective HSP length: 73
effective length of query: 42
effective length of database: 12,052,636
effective search space: 506210712
effective search space used: 506210712
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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