Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001170-TA|BGIBMGA001170-PA|undefined
(115 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY830839-1|AAW52510.1| 2434|Homo sapiens serine/threonine protei... 28 6.0
AK128177-1|BAC87310.1| 158|Homo sapiens protein ( Homo sapiens ... 28 6.0
AB002301-1|BAA20762.1| 2137|Homo sapiens KIAA0303 protein. 28 6.0
BC036444-1|AAH36444.1| 697|Homo sapiens cytoplasmic polyadenyla... 28 8.0
AL365398-3|CAI14105.1| 684|Homo sapiens cytoplasmic polyadenyla... 28 8.0
AL365398-2|CAI14104.1| 698|Homo sapiens cytoplasmic polyadenyla... 28 8.0
AL158040-5|CAI13637.1| 684|Homo sapiens cytoplasmic polyadenyla... 28 8.0
AL158040-4|CAI13636.1| 698|Homo sapiens cytoplasmic polyadenyla... 28 8.0
AB023157-1|BAA76784.2| 699|Homo sapiens KIAA0940 protein protein. 28 8.0
>AY830839-1|AAW52510.1| 2434|Homo sapiens serine/threonine protein
kinase protein.
Length = 2434
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 27 PQSPRILA-DKSTSLTVVPQQASIAASTGPSQP--THCASWSYG 67
P SP L+ D S+S P + S AAS P QP H + +YG
Sbjct: 920 PMSPHSLSSDPSSSRDSSPSRDSSAASASPHQPIVIHSSGKNYG 963
>AK128177-1|BAC87310.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ46300 fis, clone TESTI4035989. ).
Length = 158
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 43 VPQQASIAASTGPSQPTHCA 62
+P AS+ STGPSQP C+
Sbjct: 126 MPGPASLPLSTGPSQPLRCS 145
>AB002301-1|BAA20762.1| 2137|Homo sapiens KIAA0303 protein.
Length = 2137
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 27 PQSPRILA-DKSTSLTVVPQQASIAASTGPSQP--THCASWSYG 67
P SP L+ D S+S P + S AAS P QP H + +YG
Sbjct: 623 PMSPHSLSSDPSSSRDSSPSRDSSAASASPHQPIVIHSSGKNYG 666
>BC036444-1|AAH36444.1| 697|Homo sapiens cytoplasmic
polyadenylation element binding protein 3 protein.
Length = 697
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 44 PQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVST 103
PQQ AS PSQ + + + H I S S+ AA A + SSS +T
Sbjct: 187 PQQRRSPAS--PSQAPYAQRSAAAAYGHQPIMTSKPSSSSAVAAAAAAAAASSASSSWNT 244
Query: 104 HRKLRAALALAS 115
H+ + AA + S
Sbjct: 245 HQSVNAAWSAPS 256
>AL365398-3|CAI14105.1| 684|Homo sapiens cytoplasmic
polyadenylation element binding protein 3 protein.
Length = 684
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 44 PQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVST 103
PQQ AS PSQ + + + H I S S+ AA A + SSS +T
Sbjct: 187 PQQRRSPAS--PSQAPYAQRSAAAAYGHQPIMTSKPSSSSAVAAAAAAAAASSASSSWNT 244
Query: 104 HRKLRAALALAS 115
H+ + AA + S
Sbjct: 245 HQSVNAAWSAPS 256
>AL365398-2|CAI14104.1| 698|Homo sapiens cytoplasmic
polyadenylation element binding protein 3 protein.
Length = 698
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 44 PQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVST 103
PQQ AS PSQ + + + H I S S+ AA A + SSS +T
Sbjct: 187 PQQRRSPAS--PSQAPYAQRSAAAAYGHQPIMTSKPSSSSAVAAAAAAAAASSASSSWNT 244
Query: 104 HRKLRAALALAS 115
H+ + AA + S
Sbjct: 245 HQSVNAAWSAPS 256
>AL158040-5|CAI13637.1| 684|Homo sapiens cytoplasmic
polyadenylation element binding protein 3 protein.
Length = 684
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 44 PQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVST 103
PQQ AS PSQ + + + H I S S+ AA A + SSS +T
Sbjct: 187 PQQRRSPAS--PSQAPYAQRSAAAAYGHQPIMTSKPSSSSAVAAAAAAAAASSASSSWNT 244
Query: 104 HRKLRAALALAS 115
H+ + AA + S
Sbjct: 245 HQSVNAAWSAPS 256
>AL158040-4|CAI13636.1| 698|Homo sapiens cytoplasmic
polyadenylation element binding protein 3 protein.
Length = 698
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 44 PQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVST 103
PQQ AS PSQ + + + H I S S+ AA A + SSS +T
Sbjct: 187 PQQRRSPAS--PSQAPYAQRSAAAAYGHQPIMTSKPSSSSAVAAAAAAAAASSASSSWNT 244
Query: 104 HRKLRAALALAS 115
H+ + AA + S
Sbjct: 245 HQSVNAAWSAPS 256
>AB023157-1|BAA76784.2| 699|Homo sapiens KIAA0940 protein protein.
Length = 699
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 44 PQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVST 103
PQQ AS PSQ + + + H I S S+ AA A + SSS +T
Sbjct: 202 PQQRRSPAS--PSQAPYAQRSAAAAYGHQPIMTSKPSSSSAVAAAAAAAAASSASSSWNT 259
Query: 104 HRKLRAALALAS 115
H+ + AA + S
Sbjct: 260 HQSVNAAWSAPS 271
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.316 0.121 0.342
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,692,955
Number of Sequences: 224733
Number of extensions: 542715
Number of successful extensions: 1761
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1760
Number of HSP's gapped (non-prelim): 9
length of query: 115
length of database: 73,234,838
effective HSP length: 80
effective length of query: 35
effective length of database: 55,256,198
effective search space: 1933966930
effective search space used: 1933966930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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