Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001170-TA|BGIBMGA001170-PA|undefined
(115 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15087-1|CAA33195.1| 883|Drosophila melanogaster protein ( Dros... 28 3.4
M37083-1|AAA28494.1| 883|Drosophila melanogaster E74B protein p... 28 3.4
M37082-1|AAA28493.1| 829|Drosophila melanogaster E74A protein p... 28 3.4
BT003745-1|AAO41406.1| 883|Drosophila melanogaster SD03570p pro... 28 3.4
AE014296-2936|AAX52740.1| 883|Drosophila melanogaster CG32180-P... 28 3.4
AE014296-2935|AAF49324.1| 883|Drosophila melanogaster CG32180-P... 28 3.4
AE014296-2934|AAF49323.2| 829|Drosophila melanogaster CG32180-P... 28 3.4
AE014296-2933|AAN11697.3| 868|Drosophila melanogaster CG32180-P... 28 3.4
AE014296-2059|AAF49989.1| 747|Drosophila melanogaster CG7260-PA... 28 3.4
AE014134-2479|AAO41191.1| 458|Drosophila melanogaster CG32970-P... 28 3.4
AY061309-1|AAL28857.1| 940|Drosophila melanogaster LD22446p pro... 27 4.5
AE014134-1636|AAF52774.1| 940|Drosophila melanogaster CG3766-PA... 27 4.5
BT022412-1|AAY54828.1| 424|Drosophila melanogaster IP11572p pro... 27 6.0
BT022352-1|AAY54768.1| 424|Drosophila melanogaster IP11272p pro... 27 6.0
BT022288-1|AAY54704.1| 424|Drosophila melanogaster IP11372p pro... 27 6.0
BT022236-1|AAY54652.1| 424|Drosophila melanogaster IP11472p pro... 27 6.0
AY118573-1|AAM49942.1| 898|Drosophila melanogaster LD43055p pro... 27 6.0
AY060910-1|AAL28458.1| 285|Drosophila melanogaster GM05651p pro... 27 6.0
AE014297-1147|AAF54528.1| 892|Drosophila melanogaster CG6325-PA... 27 6.0
AE014296-3164|AAF49151.1| 401|Drosophila melanogaster CG9295-PB... 27 6.0
BT023792-1|AAZ41801.1| 475|Drosophila melanogaster GH11086p pro... 27 7.9
AE014297-465|AAN13380.1| 1573|Drosophila melanogaster CG10272-PC... 27 7.9
AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD... 27 7.9
AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB... 27 7.9
AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA... 27 7.9
AE014296-2276|AAF49819.1| 475|Drosophila melanogaster CG10713-P... 27 7.9
AE014296-571|AAF47722.1| 556|Drosophila melanogaster CG14956-PA... 27 7.9
>X15087-1|CAA33195.1| 883|Drosophila melanogaster protein (
Drosophila melanogaster74E gene. ).
Length = 883
Score = 27.9 bits (59), Expect = 3.4
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 17 QGTAHQELRLPQSPRI---LADKSTSLTVVPQQASIAASTGPSQPTHCASWSYGTHLHCL 73
Q AHQ+L Q + L+ + QQ + GP +H S + +H H
Sbjct: 629 QQLAHQQLSHQQQQALHQQLSHQQQQQQQQQQQHPHSQLNGPHPHSHPHSHPH-SHPHA- 686
Query: 74 IAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLRAALALAS 115
QH+ S AA + ++ SS+V+ L A+ A A+
Sbjct: 687 -GQHTHSTIAAAAAAAAASVVSSSSSAVAAAAMLSASAAAAA 727
>M37083-1|AAA28494.1| 883|Drosophila melanogaster E74B protein
protein.
Length = 883
Score = 27.9 bits (59), Expect = 3.4
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 17 QGTAHQELRLPQSPRI---LADKSTSLTVVPQQASIAASTGPSQPTHCASWSYGTHLHCL 73
Q AHQ+L Q + L+ + QQ + GP +H S + +H H
Sbjct: 629 QQLAHQQLSHQQQQALHQQLSHQQQQQQQQQQQHPHSQLNGPHPHSHPHSHPH-SHPHA- 686
Query: 74 IAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLRAALALAS 115
QH+ S AA + ++ SS+V+ L A+ A A+
Sbjct: 687 -GQHTHSTIAAAAAAAAASVVSSSSSAVAAAAMLSASAAAAA 727
>M37082-1|AAA28493.1| 829|Drosophila melanogaster E74A protein
protein.
Length = 829
Score = 27.9 bits (59), Expect = 3.4
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 17 QGTAHQELRLPQSPRI---LADKSTSLTVVPQQASIAASTGPSQPTHCASWSYGTHLHCL 73
Q AHQ+L Q + L+ + QQ + GP +H S + +H H
Sbjct: 575 QQLAHQQLSHQQQQALHQQLSHQQQQQQQQQQQHPHSQLNGPHPHSHPHSHPH-SHPHA- 632
Query: 74 IAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLRAALALAS 115
QH+ S AA + ++ SS+V+ L A+ A A+
Sbjct: 633 -GQHTHSTIAAAAAAAAASVVSSSSSAVAAAAMLSASAAAAA 673
>BT003745-1|AAO41406.1| 883|Drosophila melanogaster SD03570p
protein.
Length = 883
Score = 27.9 bits (59), Expect = 3.4
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 17 QGTAHQELRLPQSPRI---LADKSTSLTVVPQQASIAASTGPSQPTHCASWSYGTHLHCL 73
Q AHQ+L Q + L+ + QQ + GP +H S + +H H
Sbjct: 629 QQLAHQQLSHQQQQALHQQLSHQQQQQQQQQQQHPHSQLNGPHPHSHPHSHPH-SHPHA- 686
Query: 74 IAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLRAALALAS 115
QH+ S AA + ++ SS+V+ L A+ A A+
Sbjct: 687 -GQHTHSTIAAAAAAAAASVVSSSSSAVAAAAMLSASAAAAA 727
>AE014296-2936|AAX52740.1| 883|Drosophila melanogaster CG32180-PD,
isoform D protein.
Length = 883
Score = 27.9 bits (59), Expect = 3.4
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 17 QGTAHQELRLPQSPRI---LADKSTSLTVVPQQASIAASTGPSQPTHCASWSYGTHLHCL 73
Q AHQ+L Q + L+ + QQ + GP +H S + +H H
Sbjct: 629 QQLAHQQLSHQQQQALHQQLSHQQQQQQQQQQQHPHSQLNGPHPHSHPHSHPH-SHPHA- 686
Query: 74 IAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLRAALALAS 115
QH+ S AA + ++ SS+V+ L A+ A A+
Sbjct: 687 -GQHTHSTIAAAAAAAAASVVSSSSSAVAAAAMLSASAAAAA 727
>AE014296-2935|AAF49324.1| 883|Drosophila melanogaster CG32180-PB,
isoform B protein.
Length = 883
Score = 27.9 bits (59), Expect = 3.4
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 17 QGTAHQELRLPQSPRI---LADKSTSLTVVPQQASIAASTGPSQPTHCASWSYGTHLHCL 73
Q AHQ+L Q + L+ + QQ + GP +H S + +H H
Sbjct: 629 QQLAHQQLSHQQQQALHQQLSHQQQQQQQQQQQHPHSQLNGPHPHSHPHSHPH-SHPHA- 686
Query: 74 IAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLRAALALAS 115
QH+ S AA + ++ SS+V+ L A+ A A+
Sbjct: 687 -GQHTHSTIAAAAAAAAASVVSSSSSAVAAAAMLSASAAAAA 727
>AE014296-2934|AAF49323.2| 829|Drosophila melanogaster CG32180-PA,
isoform A protein.
Length = 829
Score = 27.9 bits (59), Expect = 3.4
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 17 QGTAHQELRLPQSPRI---LADKSTSLTVVPQQASIAASTGPSQPTHCASWSYGTHLHCL 73
Q AHQ+L Q + L+ + QQ + GP +H S + +H H
Sbjct: 575 QQLAHQQLSHQQQQALHQQLSHQQQQQQQQQQQHPHSQLNGPHPHSHPHSHPH-SHPHA- 632
Query: 74 IAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLRAALALAS 115
QH+ S AA + ++ SS+V+ L A+ A A+
Sbjct: 633 -GQHTHSTIAAAAAAAAASVVSSSSSAVAAAAMLSASAAAAA 673
>AE014296-2933|AAN11697.3| 868|Drosophila melanogaster CG32180-PC,
isoform C protein.
Length = 868
Score = 27.9 bits (59), Expect = 3.4
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 17 QGTAHQELRLPQSPRI---LADKSTSLTVVPQQASIAASTGPSQPTHCASWSYGTHLHCL 73
Q AHQ+L Q + L+ + QQ + GP +H S + +H H
Sbjct: 614 QQLAHQQLSHQQQQALHQQLSHQQQQQQQQQQQHPHSQLNGPHPHSHPHSHPH-SHPHA- 671
Query: 74 IAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLRAALALAS 115
QH+ S AA + ++ SS+V+ L A+ A A+
Sbjct: 672 -GQHTHSTIAAAAAAAAASVVSSSSSAVAAAAMLSASAAAAA 712
>AE014296-2059|AAF49989.1| 747|Drosophila melanogaster CG7260-PA
protein.
Length = 747
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/55 (30%), Positives = 22/55 (40%)
Query: 12 SADDVQGTAHQELRLPQSPRILADKSTSLTVVPQQASIAASTGPSQPTHCASWSY 66
SA + T+ Q PQ+P L ST +S G + T C S SY
Sbjct: 415 SAGNASSTSPQPPSAPQTPTSLHSTSTGSVSTSVSSSSGGGIGSAPSTGCFSSSY 469
>AE014134-2479|AAO41191.1| 458|Drosophila melanogaster CG32970-PA
protein.
Length = 458
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 22 QELRLPQSPRILADKSTSLTVVPQQASIAASTGPSQPTHCASWSYGTHLHCLIAQ 76
++LRL R A +T T V ++ A + P P H ++Y THLH Q
Sbjct: 160 RKLRLHPYHRRNATHATRTTTVASVSATATTLLPKMP-HKQPFNYHTHLHSSFQQ 213
>AY061309-1|AAL28857.1| 940|Drosophila melanogaster LD22446p
protein.
Length = 940
Score = 27.5 bits (58), Expect = 4.5
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 68 THLHCLIAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLRAA 110
T H ++A+ + R+LRAALA + H S V + + LR A
Sbjct: 296 TTQHAILAEMEQAADQVRQLRAALAELHSH-SVVDSFKVLRFA 337
>AE014134-1636|AAF52774.1| 940|Drosophila melanogaster CG3766-PA
protein.
Length = 940
Score = 27.5 bits (58), Expect = 4.5
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 68 THLHCLIAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLRAA 110
T H ++A+ + R+LRAALA + H S V + + LR A
Sbjct: 296 TTQHAILAEMEQAADQVRQLRAALAELHSH-SVVDSFKVLRFA 337
>BT022412-1|AAY54828.1| 424|Drosophila melanogaster IP11572p
protein.
Length = 424
Score = 27.1 bits (57), Expect = 6.0
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 43 VPQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVS 102
VPQQ S+ S PS+P S H+H H++ H + + + ++ S
Sbjct: 280 VPQQ-SLHTSFSPSKPRINIPESISNHIHQKKVVHTTPGLKHYKYKGVSKSYSRPDYSSY 338
Query: 103 THRK 106
HRK
Sbjct: 339 FHRK 342
>BT022352-1|AAY54768.1| 424|Drosophila melanogaster IP11272p
protein.
Length = 424
Score = 27.1 bits (57), Expect = 6.0
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 43 VPQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVS 102
VPQQ S+ S PS+P S H+H H++ H + + + ++ S
Sbjct: 280 VPQQ-SLHTSFSPSKPRINIPESISNHIHQKKVVHTTPGLKHYKYKGVSKSYSRPDYSSY 338
Query: 103 THRK 106
HRK
Sbjct: 339 FHRK 342
>BT022288-1|AAY54704.1| 424|Drosophila melanogaster IP11372p
protein.
Length = 424
Score = 27.1 bits (57), Expect = 6.0
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 43 VPQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVS 102
VPQQ S+ S PS+P S H+H H++ H + + + ++ S
Sbjct: 280 VPQQ-SLHTSFSPSKPRINIPESISNHIHQKKVVHTTPGLKHYKYKGVSKSYSRPDYSSY 338
Query: 103 THRK 106
HRK
Sbjct: 339 FHRK 342
>BT022236-1|AAY54652.1| 424|Drosophila melanogaster IP11472p
protein.
Length = 424
Score = 27.1 bits (57), Expect = 6.0
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 43 VPQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVS 102
VPQQ S+ S PS+P S H+H H++ H + + + ++ S
Sbjct: 280 VPQQ-SLHTSFSPSKPRINIPESISNHIHQKKVVHTTPGLKHYKYKGVSKSYSRPDYSSY 338
Query: 103 THRK 106
HRK
Sbjct: 339 FHRK 342
>AY118573-1|AAM49942.1| 898|Drosophila melanogaster LD43055p
protein.
Length = 898
Score = 27.1 bits (57), Expect = 6.0
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 50 AASTGPSQPTHCASWSYGT------HLHCLIAQHSSSVSTHRRLRAALATITQHSSSVST 103
A S S+ C S Y T H C S +++ RLR + ITQHS + T
Sbjct: 660 ATSVITSEEDDCISPGYHTSLPMEVHGSCYSEMQMISQASYHRLRCSSVVITQHSFDLET 719
>AY060910-1|AAL28458.1| 285|Drosophila melanogaster GM05651p
protein.
Length = 285
Score = 27.1 bits (57), Expect = 6.0
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 50 AASTGPSQPTHCASWSYGT------HLHCLIAQHSSSVSTHRRLRAALATITQHSSSVST 103
A S S+ C S Y T H C S +++ RLR + ITQHS + T
Sbjct: 53 ATSVITSEEDDCISPGYHTSLPMEVHGSCYSEMQMISQASYHRLRCSSVVITQHSFDLET 112
>AE014297-1147|AAF54528.1| 892|Drosophila melanogaster CG6325-PA
protein.
Length = 892
Score = 27.1 bits (57), Expect = 6.0
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 50 AASTGPSQPTHCASWSYGT------HLHCLIAQHSSSVSTHRRLRAALATITQHSSSVST 103
A S S+ C S Y T H C S +++ RLR + ITQHS + T
Sbjct: 660 ATSVITSEEDDCISPGYHTSLPMEVHGSCYSEMQMISQASYHRLRCSSVVITQHSFDLET 719
>AE014296-3164|AAF49151.1| 401|Drosophila melanogaster CG9295-PB
protein.
Length = 401
Score = 27.1 bits (57), Expect = 6.0
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 43 VPQQASIAASTGPSQPTHCASWSYGTHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVS 102
VPQQ S+ S PS+P S H+H H++ H + + + ++ S
Sbjct: 257 VPQQ-SLHTSFSPSKPRINIPESISNHIHQKKVVHTTPGLKHYKYKGVSKSYSRPDYSSY 315
Query: 103 THRK 106
HRK
Sbjct: 316 FHRK 319
>BT023792-1|AAZ41801.1| 475|Drosophila melanogaster GH11086p
protein.
Length = 475
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 75 AQHSSSVSTHRRLRAALATITQHSSSVSTHRKLRAALA 112
+ HS+S S ++R +A AT +H+SS + AA A
Sbjct: 237 SNHSTSGSNNQRQASAYATPRRHNSSSNMRHSTPAAAA 274
>AE014297-465|AAN13380.1| 1573|Drosophila melanogaster CG10272-PC,
isoform C protein.
Length = 1573
Score = 26.6 bits (56), Expect = 7.9
Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 15 DVQGTAHQELRLPQSPRILADKS---TSLTVVPQQASIAASTGPSQPTHCASWSYGTHLH 71
++ T QEL L + L+ + ++ + Q+ S+ T + T + GT++
Sbjct: 802 ELSETTAQELVLKEIANTLSQRKKLYAQVSTIEQETSVLQKTAEERSTAATLLAQGTNM- 860
Query: 72 CLIAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLR 108
+++ SSS S+ +A+ + +SV R+ R
Sbjct: 861 -IVSTGSSSSSSTTVCASAVTAQSNKLNSVKNSRRNR 896
>AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD,
isoform D protein.
Length = 1848
Score = 26.6 bits (56), Expect = 7.9
Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 15 DVQGTAHQELRLPQSPRILADKS---TSLTVVPQQASIAASTGPSQPTHCASWSYGTHLH 71
++ T QEL L + L+ + ++ + Q+ S+ T + T + GT++
Sbjct: 802 ELSETTAQELVLKEIANTLSQRKKLYAQVSTIEQETSVLQKTAEERSTAATLLAQGTNM- 860
Query: 72 CLIAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLR 108
+++ SSS S+ +A+ + +SV R+ R
Sbjct: 861 -IVSTGSSSSSSTTVCASAVTAQSNKLNSVKNSRRNR 896
>AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB,
isoform B protein.
Length = 1848
Score = 26.6 bits (56), Expect = 7.9
Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 15 DVQGTAHQELRLPQSPRILADKS---TSLTVVPQQASIAASTGPSQPTHCASWSYGTHLH 71
++ T QEL L + L+ + ++ + Q+ S+ T + T + GT++
Sbjct: 802 ELSETTAQELVLKEIANTLSQRKKLYAQVSTIEQETSVLQKTAEERSTAATLLAQGTNM- 860
Query: 72 CLIAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLR 108
+++ SSS S+ +A+ + +SV R+ R
Sbjct: 861 -IVSTGSSSSSSTTVCASAVTAQSNKLNSVKNSRRNR 896
>AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA,
isoform A protein.
Length = 1848
Score = 26.6 bits (56), Expect = 7.9
Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 15 DVQGTAHQELRLPQSPRILADKS---TSLTVVPQQASIAASTGPSQPTHCASWSYGTHLH 71
++ T QEL L + L+ + ++ + Q+ S+ T + T + GT++
Sbjct: 802 ELSETTAQELVLKEIANTLSQRKKLYAQVSTIEQETSVLQKTAEERSTAATLLAQGTNM- 860
Query: 72 CLIAQHSSSVSTHRRLRAALATITQHSSSVSTHRKLR 108
+++ SSS S+ +A+ + +SV R+ R
Sbjct: 861 -IVSTGSSSSSSTTVCASAVTAQSNKLNSVKNSRRNR 896
>AE014296-2276|AAF49819.1| 475|Drosophila melanogaster CG10713-PA
protein.
Length = 475
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 75 AQHSSSVSTHRRLRAALATITQHSSSVSTHRKLRAALA 112
+ HS+S S ++R +A AT +H+SS + AA A
Sbjct: 237 SNHSTSGSNNQRQASAYATPRRHNSSSNMRHSTPAAAA 274
>AE014296-571|AAF47722.1| 556|Drosophila melanogaster CG14956-PA
protein.
Length = 556
Score = 26.6 bits (56), Expect = 7.9
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 20 AHQELRLPQSPRILADKSTSLTVVPQQASIAASTGPSQ--PTHCASWSY-GTHLHCLIAQ 76
AH E R P SP I +S + + + AA+ G S+ + AS S GTHLH A
Sbjct: 346 AH-ERRSPHSPSI--SRSQVVERAGKNPAEAANGGGSRLRTSKSASGSITGTHLHPGQAT 402
Query: 77 HSSSVSTHRRLRAALATITQHSSSVSTHRKL 107
SSS LR + + SS T R++
Sbjct: 403 MSSSFEHLPTLRVKNEELQRSVSSPQTQREI 433
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.316 0.121 0.342
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,282,053
Number of Sequences: 52641
Number of extensions: 193019
Number of successful extensions: 866
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 849
Number of HSP's gapped (non-prelim): 32
length of query: 115
length of database: 24,830,863
effective HSP length: 75
effective length of query: 40
effective length of database: 20,882,788
effective search space: 835311520
effective search space used: 835311520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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