GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001169-TA|BGIBMGA001169-PA|undefined
         (359 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     29   0.20 
AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    24   5.6  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    24   5.6  

>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 29.1 bits (62), Expect = 0.20
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 7/69 (10%)

Query: 232 KEGYPFNFVEGEMWEKSPFTLWD--FMQQRKRWIQGILLVVHSKEI-----PLVNNVFLA 284
           KE  PFN VE E+++K  +TL     M  RK     +L  V+++E       L     +A
Sbjct: 118 KECLPFNLVESEIFKKFVYTLNPNYIMPTRKSLSNALLPSVYNQEFEKAKEKLSTAKAIA 177

Query: 285 ISSYSWVTL 293
           I+S  W  L
Sbjct: 178 ITSDGWTNL 186


>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 8/11 (72%), Positives = 10/11 (90%)

Query: 139 INLPKHRKYQF 149
           +NLPKHR YQ+
Sbjct: 44  LNLPKHRLYQY 54


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 8/11 (72%), Positives = 10/11 (90%)

Query: 139 INLPKHRKYQF 149
           +NLPKHR YQ+
Sbjct: 44  LNLPKHRLYQY 54


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.327    0.142    0.453 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 346,825
Number of Sequences: 2123
Number of extensions: 13138
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 3
length of query: 359
length of database: 516,269
effective HSP length: 65
effective length of query: 294
effective length of database: 378,274
effective search space: 111212556
effective search space used: 111212556
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 48 (23.4 bits)