GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001169-TA|BGIBMGA001169-PA|undefined
         (359 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     25   1.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   4.0  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   7.1  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   9.3  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 323 AVNIYMYIFGVIKSFPVHRFGPLKFILFVGGA 354
           A  +Y Y F +I S P  R  P  + +  GG+
Sbjct: 360 AAMLYQYNFNIIISEPTERISPYGYPIGSGGS 391


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 158 NEQIVNWLTTLADSFRVADDMGKLR 182
           N  + NW++   D+ RVA   G+ R
Sbjct: 342 NGSVTNWVSGNHDNHRVASRFGRQR 366


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 9/19 (47%), Positives = 14/19 (73%), Gaps = 1/19 (5%)

Query: 292 TLP-LSTSNVVLAALCPIP 309
           T+P L+++NV L+  CP P
Sbjct: 620 TIPSLNSTNVTLSTKCPYP 638


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 108 KLVKDNVNRNMNKCIDVGMEN 128
           KL  + VNR +N C D+   N
Sbjct: 90  KLDSEQVNRLVNNCKDITESN 110


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.327    0.142    0.453 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,164
Number of Sequences: 429
Number of extensions: 4625
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 4
length of query: 359
length of database: 140,377
effective HSP length: 59
effective length of query: 300
effective length of database: 115,066
effective search space: 34519800
effective search space used: 34519800
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 44 (21.8 bits)